RNA–Protein interactions for RNA: ENST00000392456.3

CCDC50-202, Transcript of coiled-coil domain containing 50, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CCDC50, Length 2,454 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50-202ENST00000392456 TUBB4BP68371 445 aa20.68■□□□□ 0.9
CCDC50-202ENST00000392456 EHHADHQ08426 723 aa20.68■□□□□ 0.9
CCDC50-202ENST00000392456 TSGA10Q9BZW7 698 aa20.68■□□□□ 0.9
CCDC50-202ENST00000392456 GOLGA6L9A6NEM1 432 aa20.68■□□□□ 0.9
CCDC50-202ENST00000392456 USP4Q13107 963 aa20.68■□□□□ 0.9
CCDC50-202ENST00000392456 EPHA7Q15375 998 aa20.68■□□□□ 0.9
CCDC50-202ENST00000392456 SPATA1Q5VX52 437 aa20.68■□□□□ 0.9
CCDC50-202ENST00000392456 SYT2Q8N9I0 419 aaPredicted RBP20.68■□□□□ 0.9
CCDC50-202ENST00000392456 LXNQ9BS40 222 aa20.68■□□□□ 0.9
CCDC50-202ENST00000392456 RUSC1Q9BVN2 902 aa20.68■□□□□ 0.9
CCDC50-202ENST00000392456 TBC1D7Q9P0N9 293 aa20.68■□□□□ 0.9
CCDC50-202ENST00000392456 PCDHGC5Q9Y5F6 944 aa20.68■□□□□ 0.9
CCDC50-202ENST00000392456 CETPP11597 493 aa20.67■□□□□ 0.9
CCDC50-202ENST00000392456 RANBP1P43487 201 aa20.67■□□□□ 0.9
CCDC50-202ENST00000392456 GTF2A2P52657 109 aa20.67■□□□□ 0.9
CCDC50-202ENST00000392456 HUNKP57058 714 aa20.67■□□□□ 0.9
CCDC50-202ENST00000392456 ERVK-9P63128 1117 aa20.67■□□□□ 0.9
CCDC50-202ENST00000392456 ERVK-24P63145 666 aa20.67■□□□□ 0.9
CCDC50-202ENST00000392456 SP2Q02086 613 aa20.67■□□□□ 0.9
CCDC50-202ENST00000392456 PAK1Q13153 545 aa20.67■□□□□ 0.9
CCDC50-202ENST00000392456 LRRC41Q15345 812 aa20.67■□□□□ 0.9
CCDC50-202ENST00000392456 CCDC181Q5TID7 509 aa20.67■□□□□ 0.9
CCDC50-202ENST00000392456 CHADLQ6NUI6 762 aa20.67■□□□□ 0.9
CCDC50-202ENST00000392456 CNNM4Q6P4Q7 775 aa20.67■□□□□ 0.9
CCDC50-202ENST00000392456 CAPS2Q9BXY5 557 aa20.67■□□□□ 0.9
CCDC50-202ENST00000392456 RABEP2Q9H5N1 569 aa20.67■□□□□ 0.9
CCDC50-202ENST00000392456 FBXO40Q9UH90 709 aa20.67■□□□□ 0.9
CCDC50-202ENST00000392456 PVALEFA0A1B0GWK0 134 aa20.67■□□□□ 0.9
CCDC50-202ENST00000392456 SLC8A1P32418 973 aa20.67■□□□□ 0.9
CCDC50-202ENST00000392456 E2F5Q15329 346 aa20.67■□□□□ 0.9
CCDC50-202ENST00000392456 WDR78Q5VTH9 848 aa20.67■□□□□ 0.9
CCDC50-202ENST00000392456 TRMT1LQ7Z2T5 733 aaKnown RBP20.67■□□□□ 0.9
CCDC50-202ENST00000392456 MIER3Q7Z3K6 550 aa20.67■□□□□ 0.9
CCDC50-202ENST00000392456 CCDC13Q8IYE1 715 aa20.67■□□□□ 0.9
CCDC50-202ENST00000392456 ANKRD13CQ8N6S4 541 aa20.67■□□□□ 0.9
CCDC50-202ENST00000392456 EPAS1Q99814 870 aa20.67■□□□□ 0.9
CCDC50-202ENST00000392456 RMI1Q9H9A7 625 aa20.67■□□□□ 0.9
CCDC50-202ENST00000392456 TUFT1Q9NNX1 390 aa20.67■□□□□ 0.9
CCDC50-202ENST00000392456 RWDD2AQ9UIY3 292 aa20.67■□□□□ 0.9
CCDC50-202ENST00000392456 TUBBP07437 444 aa20.66■□□□□ 0.9
CCDC50-202ENST00000392456 KCNA2P16389 499 aa20.66■□□□□ 0.9
CCDC50-202ENST00000392456 ALDH5A1P51649 535 aaPredicted RBP20.66■□□□□ 0.9
CCDC50-202ENST00000392456 XRRA1Q6P2D8 792 aa20.66■□□□□ 0.9
CCDC50-202ENST00000392456 FAM133AQ8N9E0 248 aa20.66■□□□□ 0.9
CCDC50-202ENST00000392456 SMCR8Q8TEV9 937 aaPredicted RBP20.66■□□□□ 0.9
CCDC50-202ENST00000392456 SH2D3AQ9BRG2 576 aa20.66■□□□□ 0.9
CCDC50-202ENST00000392456 INTS13Q9NVM9 706 aa20.66■□□□□ 0.9
CCDC50-202ENST00000392456 RSPH10B2B2RC85 870 aa20.66■□□□□ 0.9
CCDC50-202ENST00000392456 SLC26A4O43511 780 aa20.66■□□□□ 0.9
CCDC50-202ENST00000392456 SMNDC1O75940 238 aaKnown RBP eCLIP20.66■□□□□ 0.9
CCDC50-202ENST00000392456 RSPH10BP0C881 870 aa20.66■□□□□ 0.9
CCDC50-202ENST00000392456 COASYQ13057 564 aa20.66■□□□□ 0.9
CCDC50-202ENST00000392456 GIT2Q14161 759 aa20.66■□□□□ 0.9
CCDC50-202ENST00000392456 UGCGQ16739 394 aa20.66■□□□□ 0.9
CCDC50-202ENST00000392456 SLC30A9Q6PML9 568 aa20.66■□□□□ 0.9
CCDC50-202ENST00000392456 FGD4Q96M96 766 aa20.66■□□□□ 0.9
CCDC50-202ENST00000392456 TBC1D22BQ9NU19 505 aa20.66■□□□□ 0.9
CCDC50-202ENST00000392456 PANK4Q9NVE7 773 aa20.66■□□□□ 0.9
CCDC50-202ENST00000392456 PUF60Q9UHX1 559 aaKnown RBP20.66■□□□□ 0.9
CCDC50-202ENST00000392456 TPX2Q9ULW0 747 aaKnown RBP20.66■□□□□ 0.9
CCDC50-202ENST00000392456 KIAA1217Q5T5P2 1943 aa20.66■□□□□ 0.9
CCDC50-202ENST00000392456 PFASO15067 1338 aa20.66■□□□□ 0.9
CCDC50-202ENST00000392456 TMEM150BA6NC51 233 aa20.65■□□□□ 0.9
CCDC50-202ENST00000392456 EYA4O95677 639 aa20.65■□□□□ 0.9
CCDC50-202ENST00000392456 SERPINC1P01008 464 aa20.65■□□□□ 0.9
CCDC50-202ENST00000392456 ZRSR2Q15696 482 aaKnown RBP20.65■□□□□ 0.9
CCDC50-202ENST00000392456 EEPD1Q7L9B9 569 aa20.65■□□□□ 0.9
CCDC50-202ENST00000392456 DNERQ8NFT8 737 aa20.65■□□□□ 0.9
CCDC50-202ENST00000392456 GPRASP2Q96D09 838 aa20.65■□□□□ 0.9
CCDC50-202ENST00000392456 OSBPL9Q96SU4 736 aa20.65■□□□□ 0.9
CCDC50-202ENST00000392456 REEP2Q9BRK0 252 aa20.65■□□□□ 0.9
CCDC50-202ENST00000392456 HPCAL4Q9UM19 191 aa20.65■□□□□ 0.9
CCDC50-202ENST00000392456 TPP2P29144 1249 aaPredicted RBP20.65■□□□□ 0.9
CCDC50-202ENST00000392456 SP4Q02446 784 aa20.65■□□□□ 0.9
CCDC50-202ENST00000392456 TMEM132AQ24JP5 1023 aa20.65■□□□□ 0.9
CCDC50-202ENST00000392456 BZW1Q7L1Q6 419 aaKnown RBP20.65■□□□□ 0.9
CCDC50-202ENST00000392456 SLC25A27O95847 323 aa20.64■□□□□ 0.9
CCDC50-202ENST00000392456 UBASH3AP57075 661 aa20.64■□□□□ 0.9
CCDC50-202ENST00000392456 GNGT1P63211 74 aa20.64■□□□□ 0.9
CCDC50-202ENST00000392456 CDKAL1Q5VV42 579 aa20.64■□□□□ 0.9
CCDC50-202ENST00000392456 RINT1Q6NUQ1 792 aa20.64■□□□□ 0.9
CCDC50-202ENST00000392456 CYB5D1Q6P9G0 228 aa20.64■□□□□ 0.9
CCDC50-202ENST00000392456 APTXQ7Z2E3 356 aaKnown RBP20.64■□□□□ 0.9
CCDC50-202ENST00000392456 FAM81AQ8TBF8 368 aa20.64■□□□□ 0.9
CCDC50-202ENST00000392456 ZHX3Q9H4I2 956 aa20.64■□□□□ 0.9
CCDC50-202ENST00000392456 PCDHA2Q9Y5H9 948 aa20.64■□□□□ 0.9
CCDC50-202ENST00000392456 STK24Q9Y6E0 443 aa20.64■□□□□ 0.9
CCDC50-202ENST00000392456 SFI1A8K8P3 1242 aa20.64■□□□□ 0.89
CCDC50-202ENST00000392456 STXBP2Q15833 593 aa20.64■□□□□ 0.89
CCDC50-202ENST00000392456 ANKRD40Q6AI12 368 aa20.64■□□□□ 0.89
CCDC50-202ENST00000392456 SEPT14Q6ZU15 432 aa20.64■□□□□ 0.89
CCDC50-202ENST00000392456 NLRX1Q86UT6 975 aa20.64■□□□□ 0.89
CCDC50-202ENST00000392456 RIN2Q8WYP3 895 aaPredicted RBP20.64■□□□□ 0.89
CCDC50-202ENST00000392456 LRRC27Q9C0I9 530 aa20.64■□□□□ 0.89
CCDC50-202ENST00000392456 SEMA6BQ9H3T3 888 aa20.64■□□□□ 0.89
CCDC50-202ENST00000392456 BMP2KQ9NSY1 1161 aaPredicted RBP20.64■□□□□ 0.89
CCDC50-202ENST00000392456 SPATA31C2B4DYI2 1134 aa20.63■□□□□ 0.89
CCDC50-202ENST00000392456 KRT18P05783 430 aaKnown RBP20.63■□□□□ 0.89
CCDC50-202ENST00000392456 TTI2Q6NXR4 508 aa20.63■□□□□ 0.89
CCDC50-202ENST00000392456 IRF2BP1Q8IU81 584 aa20.63■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms