RNA–Protein interactions for RNA: ENST00000390468.1

TRAV41-201, Transcript of T cell receptor alpha variable 41, humanhuman

APPRIS P1 BASIC

Gene TRAV41, Length 336 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV41-201ENST00000390468 CCDC159P0C7I6 412 aa2.9□□□□□ -1.95
TRAV41-201ENST00000390468 UQCRFS1P1P0C7P4 283 aa2.9□□□□□ -1.95
TRAV41-201ENST00000390468 TROVE2P10155 538 aaKnown RBP eCLIP2.9□□□□□ -1.95
TRAV41-201ENST00000390468 GYS1P13807 737 aa2.9□□□□□ -1.95
TRAV41-201ENST00000390468 ATP5JP18859 108 aa2.9□□□□□ -1.95
TRAV41-201ENST00000390468 CYP11B2P19099 503 aa2.9□□□□□ -1.95
TRAV41-201ENST00000390468 FUT4P22083 530 aa2.9□□□□□ -1.95
TRAV41-201ENST00000390468 PTGS1P23219 599 aa2.9□□□□□ -1.95
TRAV41-201ENST00000390468 MCM3P25205 808 aa2.9□□□□□ -1.95
TRAV41-201ENST00000390468 CHMLP26374 656 aa2.9□□□□□ -1.95
TRAV41-201ENST00000390468 ALDH1B1P30837 517 aa2.9□□□□□ -1.95
TRAV41-201ENST00000390468 GRIA4P48058 902 aa2.9□□□□□ -1.95
TRAV41-201ENST00000390468 MCM2P49736 904 aa2.9□□□□□ -1.95
TRAV41-201ENST00000390468 TIMM10P62072 90 aa2.9□□□□□ -1.95
TRAV41-201ENST00000390468 PLCB3Q01970 1234 aa2.9□□□□□ -1.95
TRAV41-201ENST00000390468 TAGLNQ01995 201 aaKnown RBP2.9□□□□□ -1.95
TRAV41-201ENST00000390468 AKAP17AQ02040 695 aaKnown RBP2.9□□□□□ -1.95
TRAV41-201ENST00000390468 CHRNDQ07001 517 aa2.9□□□□□ -1.95
TRAV41-201ENST00000390468 MPP3Q13368 585 aa2.9□□□□□ -1.95
TRAV41-201ENST00000390468 DRP2Q13474 957 aa2.9□□□□□ -1.95
TRAV41-201ENST00000390468 GNL2Q13823 731 aaKnown RBP2.9□□□□□ -1.95
TRAV41-201ENST00000390468 NFIXQ14938 502 aa2.9□□□□□ -1.95
TRAV41-201ENST00000390468 POSTNQ15063 836 aa2.9□□□□□ -1.95
TRAV41-201ENST00000390468 SF3B3Q15393 1217 aaKnown RBP2.9□□□□□ -1.95
TRAV41-201ENST00000390468 PUM3Q15397 648 aaKnown RBP2.9□□□□□ -1.95
TRAV41-201ENST00000390468 KCNMB1Q16558 191 aa2.9□□□□□ -1.95
TRAV41-201ENST00000390468 AOC3Q16853 763 aa2.9□□□□□ -1.95
TRAV41-201ENST00000390468 KIF4BQ2VIQ3 1234 aa2.9□□□□□ -1.95
TRAV41-201ENST00000390468 Q4G0T1 1027 aa2.9□□□□□ -1.95
TRAV41-201ENST00000390468 SLC10A5Q5PT55 438 aa2.9□□□□□ -1.95
TRAV41-201ENST00000390468 HP1BP3Q5SSJ5 553 aaPredicted RBP2.9□□□□□ -1.95
TRAV41-201ENST00000390468 AKNAD1Q5T1N1 836 aa2.9□□□□□ -1.95
TRAV41-201ENST00000390468 SFMBT2Q5VUG0 894 aa2.9□□□□□ -1.95
TRAV41-201ENST00000390468 CWF19L1Q69YN2 538 aaKnown RBP2.9□□□□□ -1.95
TRAV41-201ENST00000390468 FAAH2Q6GMR7 532 aa2.9□□□□□ -1.95
TRAV41-201ENST00000390468 PRR5LQ6MZQ0 368 aa2.9□□□□□ -1.95
TRAV41-201ENST00000390468 ZSCAN25Q6NSZ9 544 aa2.9□□□□□ -1.95
TRAV41-201ENST00000390468 CC2D1AQ6P1N0 951 aaPredicted RBP2.9□□□□□ -1.95
TRAV41-201ENST00000390468 OLFML1Q6UWY5 402 aa2.9□□□□□ -1.95
TRAV41-201ENST00000390468 CWC27Q6UX04 472 aaKnown RBP2.9□□□□□ -1.95
TRAV41-201ENST00000390468 LRRC31Q6UY01 552 aa2.9□□□□□ -1.95
TRAV41-201ENST00000390468 CATIPQ7Z7H3 387 aa2.9□□□□□ -1.95
TRAV41-201ENST00000390468 ATG4DQ86TL0 474 aaPredicted RBP2.9□□□□□ -1.95
TRAV41-201ENST00000390468 RSPH3Q86UC2 560 aa2.9□□□□□ -1.95
TRAV41-201ENST00000390468 AMIGO3Q86WK7 504 aa2.9□□□□□ -1.95
TRAV41-201ENST00000390468 CEP57Q86XR8 500 aa2.9□□□□□ -1.95
TRAV41-201ENST00000390468 WFDC3Q8IUB2 231 aa2.9□□□□□ -1.95
TRAV41-201ENST00000390468 PEX5LQ8IYB4 626 aa2.9□□□□□ -1.95
TRAV41-201ENST00000390468 NLGN1Q8N2Q7 840 aa2.9□□□□□ -1.95
TRAV41-201ENST00000390468 TRIML1Q8N9V2 468 aa2.9□□□□□ -1.95
TRAV41-201ENST00000390468 GLIS3Q8NEA6 775 aa2.9□□□□□ -1.95
TRAV41-201ENST00000390468 TRIM58Q8NG06 486 aa2.9□□□□□ -1.95
TRAV41-201ENST00000390468 OR8K1Q8NGG5 319 aa2.9□□□□□ -1.95
TRAV41-201ENST00000390468 AFAP1L1Q8TED9 768 aa2.9□□□□□ -1.95
TRAV41-201ENST00000390468 PPIL4Q8WUA2 492 aaKnown RBP eCLIP2.9□□□□□ -1.95
TRAV41-201ENST00000390468 ZFAND2BQ8WV99 257 aa2.9□□□□□ -1.95
TRAV41-201ENST00000390468 CTNNBL1Q8WYA6 563 aaPredicted RBP2.9□□□□□ -1.95
TRAV41-201ENST00000390468 LPIN2Q92539 896 aa2.9□□□□□ -1.95
TRAV41-201ENST00000390468 GOLGA1Q92805 767 aa2.9□□□□□ -1.95
TRAV41-201ENST00000390468 PPP1R14BQ96C90 147 aa2.9□□□□□ -1.95
TRAV41-201ENST00000390468 CDK5RAP3Q96JB5 506 aa2.9□□□□□ -1.95
TRAV41-201ENST00000390468 MPP4Q96JB8 637 aa2.9□□□□□ -1.95
TRAV41-201ENST00000390468 SPAG5Q96R06 1193 aa2.9□□□□□ -1.95
TRAV41-201ENST00000390468 GORASP1Q9BQQ3 440 aa2.9□□□□□ -1.95
TRAV41-201ENST00000390468 TRIM56Q9BRZ2 755 aaKnown RBP2.9□□□□□ -1.95
TRAV41-201ENST00000390468 RBCK1Q9BYM8 510 aa2.9□□□□□ -1.95
TRAV41-201ENST00000390468 UBXN6Q9BZV1 441 aa2.9□□□□□ -1.95
TRAV41-201ENST00000390468 NRSN2Q9GZP1 204 aa2.9□□□□□ -1.95
TRAV41-201ENST00000390468 ANKRD2Q9GZV1 360 aa2.9□□□□□ -1.95
TRAV41-201ENST00000390468 NACA2Q9H009 215 aa2.9□□□□□ -1.95
TRAV41-201ENST00000390468 NAT10Q9H0A0 1025 aaKnown RBP2.9□□□□□ -1.95
TRAV41-201ENST00000390468 TAOK3Q9H2K8 898 aa2.9□□□□□ -1.95
TRAV41-201ENST00000390468 ACTR5Q9H9F9 607 aaPredicted RBP2.9□□□□□ -1.95
TRAV41-201ENST00000390468 L2HGDHQ9H9P8 463 aa2.9□□□□□ -1.95
TRAV41-201ENST00000390468 PAG1Q9NWQ8 432 aa2.9□□□□□ -1.95
TRAV41-201ENST00000390468 UBAP1Q9NZ09 502 aa2.9□□□□□ -1.95
TRAV41-201ENST00000390468 ORC3Q9UBD5 711 aaPredicted RBP2.9□□□□□ -1.95
TRAV41-201ENST00000390468 DNAI1Q9UI46 699 aa2.9□□□□□ -1.95
TRAV41-201ENST00000390468 PNMA2Q9UL42 364 aa2.9□□□□□ -1.95
TRAV41-201ENST00000390468 PPP1R9AQ9ULJ8 1098 aa2.9□□□□□ -1.95
TRAV41-201ENST00000390468 TPX2Q9ULW0 747 aaKnown RBP2.9□□□□□ -1.95
TRAV41-201ENST00000390468 BARX2Q9UMQ3 279 aaPredicted RBP2.9□□□□□ -1.95
TRAV41-201ENST00000390468 G3BP2Q9UN86 482 aaKnown RBP2.9□□□□□ -1.95
TRAV41-201ENST00000390468 ITM2BQ9Y287 266 aa2.9□□□□□ -1.95
TRAV41-201ENST00000390468 TMEM98Q9Y2Y6 226 aa2.9□□□□□ -1.95
TRAV41-201ENST00000390468 ATP6V0A2Q9Y487 856 aa2.9□□□□□ -1.95
TRAV41-201ENST00000390468 CTDP1Q9Y5B0 961 aaPredicted RBP2.9□□□□□ -1.95
TRAV41-201ENST00000390468 GMEB1Q9Y692 573 aa2.9□□□□□ -1.95
TRAV41-201ENST00000390468 IKBKGQ9Y6K9 419 aa2.9□□□□□ -1.95
TRAV41-201ENST00000390468 CAPN7Q9Y6W3 813 aa2.9□□□□□ -1.95
TRAV41-201ENST00000390468 FAM169AQ9Y6X4 670 aa2.9□□□□□ -1.95
TRAV41-201ENST00000390468 U3KQE9 123 aa2.9□□□□□ -1.95
TRAV41-201ENST00000390468 COL11A1P12107 1806 aaPredicted RBP2.9□□□□□ -1.95
TRAV41-201ENST00000390468 PARP14Q460N5 1801 aa2.9□□□□□ -1.95
TRAV41-201ENST00000390468 PNPLA7Q6ZV29 1317 aa2.9□□□□□ -1.95
TRAV41-201ENST00000390468 GREB1LQ9C091 1923 aaPredicted RBP2.89□□□□□ -1.95
TRAV41-201ENST00000390468 ZNFX1Q9P2E3 1918 aaKnown RBP2.89□□□□□ -1.95
TRAV41-201ENST00000390468 MED23Q9ULK4 1368 aa2.89□□□□□ -1.95
TRAV41-201ENST00000390468 A0A1W2PP55 124 aa2.89□□□□□ -1.95
TRAV41-201ENST00000390468 BICDL2A1A5D9 508 aa2.89□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms