RNA–Protein interactions for RNA: ENST00000383721.8

NEK4-202, Transcript of NIMA related kinase 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NEK4, Length 2,576 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK4-202ENST00000383721 ZNF408Q9H9D4 720 aa15.08■□□□□ 0
NEK4-202ENST00000383721 XPO5Q9HAV4 1204 aaKnown RBP eCLIP15.08■□□□□ 0
NEK4-202ENST00000383721 PRR12Q9ULL5 1215 aa15.08■□□□□ 0
NEK4-202ENST00000383721 A0A0A6YYK5 440 aaPredicted RBP15.07■□□□□ 0
NEK4-202ENST00000383721 PGRMC1O00264 195 aaKnown RBP15.07■□□□□ 0
NEK4-202ENST00000383721 ATP1A2P50993 1020 aa15.07■□□□□ 0
NEK4-202ENST00000383721 C1orf186Q6ZWK4 172 aa15.07■□□□□ 0
NEK4-202ENST00000383721 VPS36Q86VN1 386 aa15.07■□□□□ 0
NEK4-202ENST00000383721 FAM186BQ8IYM0 893 aa15.07■□□□□ 0
NEK4-202ENST00000383721 PROCA1Q8NCQ7 364 aaPredicted RBP15.07■□□□□ 0
NEK4-202ENST00000383721 LNX1Q8TBB1 728 aaPredicted RBP15.07■□□□□ 0
NEK4-202ENST00000383721 U2AF1L4Q8WU68 220 aaKnown RBP15.07■□□□□ 0
NEK4-202ENST00000383721 DYDC2Q96IM9 177 aa15.07■□□□□ 0
NEK4-202ENST00000383721 CALR3Q96L12 384 aaKnown RBP15.07■□□□□ 0
NEK4-202ENST00000383721 BUD13Q9BRD0 619 aaKnown RBP eCLIP15.07■□□□□ 04e-6■□□□□ 8
NEK4-202ENST00000383721 FRMD4AQ9P2Q2 1039 aaPredicted RBP15.07■□□□□ 0
NEK4-202ENST00000383721 NOC2LQ9Y3T9 749 aaKnown RBP15.07■□□□□ 0
NEK4-202ENST00000383721 PPP2R3BQ9Y5P8 575 aa15.07■□□□□ 0
NEK4-202ENST00000383721 BHMG1C9JSJ3 638 aaPredicted RBP15.07■□□□□ 0
NEK4-202ENST00000383721 EIF3DO15371 548 aaKnown RBP eCLIP15.07■□□□□ 0
NEK4-202ENST00000383721 SART1O43290 800 aaKnown RBP15.07■□□□□ 0
NEK4-202ENST00000383721 FAM13AO94988 1023 aa15.07■□□□□ 0
NEK4-202ENST00000383721 FERP16591 822 aa15.07■□□□□ 0
NEK4-202ENST00000383721 COG2Q14746 738 aa15.07■□□□□ 0
NEK4-202ENST00000383721 PEX26Q7Z412 305 aa15.07■□□□□ 0
NEK4-202ENST00000383721 KSR1Q8IVT5 923 aa15.07■□□□□ 0
NEK4-202ENST00000383721 TPH2Q8IWU9 490 aa15.07■□□□□ 0
NEK4-202ENST00000383721 MYCT1Q8N699 235 aa15.07■□□□□ 0
NEK4-202ENST00000383721 EIF1ADQ8N9N8 165 aaKnown RBP15.07■□□□□ 0
NEK4-202ENST00000383721 SLC30A5Q8TAD4 765 aa15.07■□□□□ 0
NEK4-202ENST00000383721 INTUQ9ULD6 942 aa15.07■□□□□ 0
NEK4-202ENST00000383721 TMCO5BA8MYB1 307 aa15.06■□□□□ 0
NEK4-202ENST00000383721 CHMP2AO43633 222 aa15.06■□□□□ 0
NEK4-202ENST00000383721 EVI5O60447 810 aa15.06■□□□□ 0
NEK4-202ENST00000383721 ITGBL1O95965 494 aaPredicted RBP15.06■□□□□ 0
NEK4-202ENST00000383721 PSMC2P35998 433 aaKnown RBP15.06■□□□□ 0
NEK4-202ENST00000383721 STAT1P42224 750 aa15.06■□□□□ 0
NEK4-202ENST00000383721 EMC10Q5UCC4 262 aa15.06■□□□□ 0
NEK4-202ENST00000383721 KDM7AQ6ZMT4 941 aa15.06■□□□□ 0
NEK4-202ENST00000383721 DDX42Q86XP3 938 aaKnown RBP eCLIP15.06■□□□□ 0
NEK4-202ENST00000383721 KCTD17Q8N5Z5 321 aa15.06■□□□□ 0
NEK4-202ENST00000383721 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP15.06■□□□□ 0
NEK4-202ENST00000383721 RNPC3Q96LT9 517 aaKnown RBP15.06■□□□□ 0
NEK4-202ENST00000383721 FIZ1Q96SL8 496 aa15.06■□□□□ 0
NEK4-202ENST00000383721 DDX47Q9H0S4 455 aaKnown RBP15.06■□□□□ 0
NEK4-202ENST00000383721 SUCLA2Q9P2R7 463 aaPredicted RBP15.06■□□□□ 0
NEK4-202ENST00000383721 EBAG9O00559 213 aa15.06■□□□□ 0
NEK4-202ENST00000383721 PSMD10O75832 226 aa15.06■□□□□ 0
NEK4-202ENST00000383721 ITGA4P13612 1032 aa15.06■□□□□ 0
NEK4-202ENST00000383721 GALCP54803 685 aa15.06■□□□□ 0
NEK4-202ENST00000383721 HLTFQ14527 1009 aaKnown RBP eCLIP15.06■□□□□ 0
NEK4-202ENST00000383721 NFIL3Q16649 462 aa15.06■□□□□ 0
NEK4-202ENST00000383721 KCTD19Q17RG1 926 aaPredicted RBP15.06■□□□□ 0
NEK4-202ENST00000383721 NT5DC3Q86UY8 548 aa15.06■□□□□ 0
NEK4-202ENST00000383721 RASGEF1CQ8N431 466 aa15.06■□□□□ 0
NEK4-202ENST00000383721 TUFT1Q9NNX1 390 aa15.06■□□□□ 0
NEK4-202ENST00000383721 PLAAQ9Y263 795 aa15.06■□□□□ 0
NEK4-202ENST00000383721 PHF20L1A8MW92 1017 aa15.05■□□□□ 0
NEK4-202ENST00000383721 F8VZ95 297 aa15.05■□□□□ 0
NEK4-202ENST00000383721 SOX5P35711 763 aa15.05■□□□□ 0
NEK4-202ENST00000383721 CUL1Q13616 776 aa15.05■□□□□ 0
NEK4-202ENST00000383721 LRCH2Q5VUJ6 765 aa15.05■□□□□ 0
NEK4-202ENST00000383721 DAAM2Q86T65 1068 aa15.05■□□□□ 0
NEK4-202ENST00000383721 C1orf131Q8NDD1 294 aaKnown RBP15.05■□□□□ 0
NEK4-202ENST00000383721 LMBR1Q8WVP7 490 aa15.05■□□□□ 0
NEK4-202ENST00000383721 NEUROG2Q9H2A3 272 aa15.05■□□□□ 0
NEK4-202ENST00000383721 PARVGQ9HBI0 331 aa15.05■□□□□ 0
NEK4-202ENST00000383721 HERC5Q9UII4 1024 aaKnown RBP15.05■□□□□ 0
NEK4-202ENST00000383721 A6NNZ2 444 aa15.05■□□□□ -0
NEK4-202ENST00000383721 KRIT1O00522 736 aa15.05■□□□□ -0
NEK4-202ENST00000383721 INPP5BP32019 993 aa15.05■□□□□ -0
NEK4-202ENST00000383721 FMO5P49326 533 aa15.05■□□□□ -0
NEK4-202ENST00000383721 NPEPPSP55786 919 aa15.05■□□□□ -0
NEK4-202ENST00000383721 MAP3K10Q02779 954 aa15.05■□□□□ -0
NEK4-202ENST00000383721 TUBB8Q3ZCM7 444 aa15.05■□□□□ -0
NEK4-202ENST00000383721 SUPT20HL1Q3ZLR7 823 aa15.05■□□□□ -0
NEK4-202ENST00000383721 KIAA1755Q5JYT7 1200 aa15.05■□□□□ -0
NEK4-202ENST00000383721 GLYCTKQ8IVS8 523 aa15.05■□□□□ -0
NEK4-202ENST00000383721 EFCAB13Q8IY85 973 aa15.05■□□□□ -0
NEK4-202ENST00000383721 HES6Q96HZ4 224 aa15.05■□□□□ -0
NEK4-202ENST00000383721 ATP6V1G3Q96LB4 118 aa15.05■□□□□ -0
NEK4-202ENST00000383721 CFBP00751 764 aa15.04■□□□□ -0
NEK4-202ENST00000383721 HSD17B3P37058 310 aa15.04■□□□□ -0
NEK4-202ENST00000383721 ECE1P42892 770 aa15.04■□□□□ -0
NEK4-202ENST00000383721 PPP2R5CQ13362 524 aa15.04■□□□□ -0
NEK4-202ENST00000383721 UAP1Q16222 522 aaPredicted RBP15.04■□□□□ -0
NEK4-202ENST00000383721 CBWD6Q4V339 395 aa15.04■□□□□ -0
NEK4-202ENST00000383721 CBWD3Q5JTY5 395 aa15.04■□□□□ -0
NEK4-202ENST00000383721 CBWD5Q5RIA9 395 aa15.04■□□□□ -0
NEK4-202ENST00000383721 CEP85LQ5SZL2 805 aa15.04■□□□□ -0
NEK4-202ENST00000383721 ZNF720Q7Z2F6 126 aa15.04■□□□□ -0
NEK4-202ENST00000383721 SYCE1Q8N0S2 351 aa15.04■□□□□ -0
NEK4-202ENST00000383721 SLC5A5Q92911 643 aa15.04■□□□□ -0
NEK4-202ENST00000383721 SYT11Q9BT88 431 aa15.04■□□□□ -0
NEK4-202ENST00000383721 MKNK1Q9BUB5 465 aa15.04■□□□□ -0
NEK4-202ENST00000383721 STK33Q9BYT3 514 aa15.04■□□□□ -0
NEK4-202ENST00000383721 GPR88Q9GZN0 384 aa15.04■□□□□ -0
NEK4-202ENST00000383721 OSGEPQ9NPF4 335 aa15.04■□□□□ -0
NEK4-202ENST00000383721 WRAP73Q9P2S5 460 aaPredicted RBP15.04■□□□□ -0
NEK4-202ENST00000383721 DNAJC12Q9UKB3 198 aa15.04■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms