RNA–Protein interactions for RNA: ENST00000381867.5

SNPH-201, Transcript of syntaphilin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SNPH, Length 5,533 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNPH-201ENST00000381867 PALMO75781 387 aa14.96□□□□□ -0.01
SNPH-201ENST00000381867 ARL4AP40617 200 aa14.96□□□□□ -0.01
SNPH-201ENST00000381867 SGMS1Q86VZ5 419 aa14.96□□□□□ -0.01
SNPH-201ENST00000381867 WDR75Q8IWA0 830 aaKnown RBP14.96□□□□□ -0.01
SNPH-201ENST00000381867 SYNGAP1Q96PV0 1343 aa14.96□□□□□ -0.01
SNPH-201ENST00000381867 GSG1L2A8MUP6 293 aa14.96□□□□□ -0.01
SNPH-201ENST00000381867 MCF2P10911 925 aa14.96□□□□□ -0.01
SNPH-201ENST00000381867 ACTN3Q08043 901 aaPredicted RBP14.96□□□□□ -0.01
SNPH-201ENST00000381867 PFKFB3Q16875 520 aaPredicted RBP14.96□□□□□ -0.01
SNPH-201ENST00000381867 HP1BP3Q5SSJ5 553 aaPredicted RBP14.96□□□□□ -0.01
SNPH-201ENST00000381867 SLC7A3Q8WY07 619 aa14.96□□□□□ -0.01
SNPH-201ENST00000381867 USP17L10C9JJH3 530 aa14.96□□□□□ -0.02
SNPH-201ENST00000381867 MED7O43513 233 aa14.96□□□□□ -0.02
SNPH-201ENST00000381867 KRT37O76014 449 aa14.96□□□□□ -0.02
SNPH-201ENST00000381867 FBXO33Q7Z6M2 555 aa14.96□□□□□ -0.02
SNPH-201ENST00000381867 ARHGAP18Q8N392 663 aa14.96□□□□□ -0.02
SNPH-201ENST00000381867 BBS5Q8N3I7 341 aa14.96□□□□□ -0.02
SNPH-201ENST00000381867 SKA2Q8WVK7 121 aaPredicted RBP14.96□□□□□ -0.02
SNPH-201ENST00000381867 NUDCD1Q96RS6 583 aa14.96□□□□□ -0.02
SNPH-201ENST00000381867 CALN1Q9BXU9 219 aa14.96□□□□□ -0.02
SNPH-201ENST00000381867 FAM96AQ9H5X1 160 aa14.96□□□□□ -0.02
SNPH-201ENST00000381867 ADAMTS1Q9UHI8 967 aa14.96□□□□□ -0.02
SNPH-201ENST00000381867 ZNF609O15014 1411 aa14.96□□□□□ -0.02
SNPH-201ENST00000381867 SRGAP2O75044 1071 aa14.95□□□□□ -0.02
SNPH-201ENST00000381867 PSAPP07602 524 aa14.95□□□□□ -0.02
SNPH-201ENST00000381867 PDHA1P08559 390 aa14.95□□□□□ -0.02
SNPH-201ENST00000381867 MXI1P50539 228 aa14.95□□□□□ -0.02
SNPH-201ENST00000381867 MAGOHP61326 146 aaKnown RBP14.95□□□□□ -0.02
SNPH-201ENST00000381867 MRPS25P82663 173 aaKnown RBP14.95□□□□□ -0.02
SNPH-201ENST00000381867 MIF4GDA9UHW6 222 aaKnown RBP14.95□□□□□ -0.02
SNPH-201ENST00000381867 JAK3P52333 1124 aa14.95□□□□□ -0.02
SNPH-201ENST00000381867 TMPRSS15P98073 1019 aa14.95□□□□□ -0.02
SNPH-201ENST00000381867 GIPC2Q8TF65 315 aa14.95□□□□□ -0.02
SNPH-201ENST00000381867 DNAJC17Q9NVM6 304 aaKnown RBP14.95□□□□□ -0.02
SNPH-201ENST00000381867 SCHIP1Q9P0W5 487 aaPredicted RBP14.95□□□□□ -0.02
SNPH-201ENST00000381867 SNX24Q9Y343 169 aa14.95□□□□□ -0.02
SNPH-201ENST00000381867 NVLO15381 856 aaKnown RBP14.95□□□□□ -0.02
SNPH-201ENST00000381867 TBC1D10BQ4KMP7 808 aaPredicted RBP14.95□□□□□ -0.02
SNPH-201ENST00000381867 HIPK4Q8NE63 616 aa14.95□□□□□ -0.02
SNPH-201ENST00000381867 FBXL13Q8NEE6 735 aa14.95□□□□□ -0.02
SNPH-201ENST00000381867 PDLIM2Q96JY6 352 aa14.95□□□□□ -0.02
SNPH-201ENST00000381867 SAYSD1Q9NPB0 183 aa14.95□□□□□ -0.02
SNPH-201ENST00000381867 RASA4BC9J798 803 aa14.95□□□□□ -0.02
SNPH-201ENST00000381867 COPEO14579 308 aa14.95□□□□□ -0.02
SNPH-201ENST00000381867 RASA4O43374 803 aa14.95□□□□□ -0.02
SNPH-201ENST00000381867 C16orf87Q6PH81 154 aa14.95□□□□□ -0.02
SNPH-201ENST00000381867 FAM47EQ6ZV65 393 aa14.95□□□□□ -0.02
SNPH-201ENST00000381867 MIGA2Q7L4E1 593 aa14.95□□□□□ -0.02
SNPH-201ENST00000381867 MYLK4Q86YV6 388 aaPredicted RBP14.95□□□□□ -0.02
SNPH-201ENST00000381867 PSPC1Q8WXF1 523 aaKnown RBP14.95□□□□□ -0.02
SNPH-201ENST00000381867 TTC17Q96AE7 1141 aa14.95□□□□□ -0.02
SNPH-201ENST00000381867 OLFM3Q96PB7 478 aa14.95□□□□□ -0.02
SNPH-201ENST00000381867 POLR3CQ9BUI4 534 aaPredicted RBP14.95□□□□□ -0.02
SNPH-201ENST00000381867 SLC38A10Q9HBR0 1119 aa14.95□□□□□ -0.02
SNPH-201ENST00000381867 KMT5AQ9NQR1 393 aa14.95□□□□□ -0.02
SNPH-201ENST00000381867 NEDD4P46934 1319 aa14.94□□□□□ -0.02
SNPH-201ENST00000381867 LGALS16A8MUM7 142 aa14.94□□□□□ -0.02
SNPH-201ENST00000381867 HAUS5O94927 633 aa14.94□□□□□ -0.02
SNPH-201ENST00000381867 CSPG5O95196 566 aa14.94□□□□□ -0.02
SNPH-201ENST00000381867 HSPA4LO95757 839 aa14.94□□□□□ -0.02
SNPH-201ENST00000381867 SLC16A2P36021 539 aa14.94□□□□□ -0.02
SNPH-201ENST00000381867 FSCBQ5H9T9 825 aa14.94□□□□□ -0.02
SNPH-201ENST00000381867 C4orf50Q6ZRC1 276 aa14.94□□□□□ -0.02
SNPH-201ENST00000381867 ZC3H15Q8WU90 426 aaKnown RBP14.94□□□□□ -0.02
SNPH-201ENST00000381867 BCL9O00512 1426 aa14.94□□□□□ -0.02
SNPH-201ENST00000381867 RNF207Q6ZRF8 634 aa14.94□□□□□ -0.02
SNPH-201ENST00000381867 THOC1Q96FV9 657 aaKnown RBP14.94□□□□□ -0.02
SNPH-201ENST00000381867 PCIF1Q9H4Z3 704 aa14.94□□□□□ -0.02
SNPH-201ENST00000381867 MRFAP1Q9Y605 127 aa14.94□□□□□ -0.02
SNPH-201ENST00000381867 CTIFO43310 598 aaKnown RBP14.94□□□□□ -0.02
SNPH-201ENST00000381867 CAV1Q03135 178 aa14.94□□□□□ -0.02
SNPH-201ENST00000381867 SLC12A1Q13621 1099 aa14.94□□□□□ -0.02
SNPH-201ENST00000381867 C12orf60Q5U649 245 aa14.94□□□□□ -0.02
SNPH-201ENST00000381867 KCNV2Q8TDN2 545 aa14.94□□□□□ -0.02
SNPH-201ENST00000381867 WRNIP1Q96S55 665 aa14.94□□□□□ -0.02
SNPH-201ENST00000381867 CEP72Q9P209 647 aa14.94□□□□□ -0.02
SNPH-201ENST00000381867 CDC25AP30304 524 aa14.94□□□□□ -0.02
SNPH-201ENST00000381867 CDR2Q01850 454 aa14.94□□□□□ -0.02
SNPH-201ENST00000381867 C1orf146Q5VVC0 180 aa14.94□□□□□ -0.02
SNPH-201ENST00000381867 EPM2AIP1Q7L775 607 aaPredicted RBP14.94□□□□□ -0.02
SNPH-201ENST00000381867 GSPT2Q8IYD1 628 aaKnown RBP14.94□□□□□ -0.02
SNPH-201ENST00000381867 GTF3C2Q8WUA4 911 aaPredicted RBP14.94□□□□□ -0.02
SNPH-201ENST00000381867 CAPN11Q9UMQ6 739 aa14.94□□□□□ -0.02
SNPH-201ENST00000381867 APOBEC2Q9Y235 224 aaKnown RBP14.94□□□□□ -0.02
SNPH-201ENST00000381867 FASTKD5Q7L8L6 764 aaKnown RBP14.94□□□□□ -0.02
SNPH-201ENST00000381867 FAM167AQ96KS9 214 aa14.94□□□□□ -0.02
SNPH-201ENST00000381867 WDR3Q9UNX4 943 aaKnown RBP eCLIP14.94□□□□□ -0.02
SNPH-201ENST00000381867 GRID2IPA4D2P6 1211 aa14.93□□□□□ -0.02
SNPH-201ENST00000381867 PLA2G4BP0C869 781 aa14.93□□□□□ -0.02
SNPH-201ENST00000381867 MYO1EQ12965 1108 aa14.93□□□□□ -0.02
SNPH-201ENST00000381867 CAPRIN2Q6IMN6 1127 aaKnown RBP14.93□□□□□ -0.02
SNPH-201ENST00000381867 AGBL3Q8NEM8 1001 aa14.93□□□□□ -0.02
SNPH-201ENST00000381867 CALR3Q96L12 384 aaKnown RBP14.93□□□□□ -0.02
SNPH-201ENST00000381867 ATP6V1G3Q96LB4 118 aa14.93□□□□□ -0.02
SNPH-201ENST00000381867 INO80B-WBP1J3KQ70 363 aa14.93□□□□□ -0.02
SNPH-201ENST00000381867 RFX5P48382 616 aaPredicted RBP14.93□□□□□ -0.02
SNPH-201ENST00000381867 PMS2P54278 862 aa14.93□□□□□ -0.02
SNPH-201ENST00000381867 ARL4CP56559 192 aa14.93□□□□□ -0.02
SNPH-201ENST00000381867 FAM167BQ9BTA0 163 aa14.93□□□□□ -0.02
SNPH-201ENST00000381867 INO80BQ9C086 356 aaPredicted RBP14.93□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms