RNA–Protein interactions for RNA: ENST00000381835.9

CIITA-202, Transcript of class II major histocompatibility complex transactivator, humanhuman

TSL 1 (best) BASIC

Gene CIITA, Length 2,344 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-202ENST00000381835 NKRFO15226 690 aaKnown RBP eCLIP13.64□□□□□ -0.23
CIITA-202ENST00000381835 DYNC1LI2O43237 492 aaPredicted RBP13.64□□□□□ -0.23
CIITA-202ENST00000381835 DGAT1O75907 488 aa13.64□□□□□ -0.23
CIITA-202ENST00000381835 PRPF6O94906 941 aaKnown RBP13.64□□□□□ -0.23
CIITA-202ENST00000381835 POLGP54098 1239 aaPredicted RBP13.64□□□□□ -0.23
CIITA-202ENST00000381835 CENPPQ6IPU0 288 aa13.64□□□□□ -0.23
CIITA-202ENST00000381835 TTI2Q6NXR4 508 aa13.64□□□□□ -0.23
CIITA-202ENST00000381835 PLPPR4Q7Z2D5 763 aa13.64□□□□□ -0.23
CIITA-202ENST00000381835 TRIB2Q92519 343 aa13.64□□□□□ -0.23
CIITA-202ENST00000381835 DRC1Q96MC2 740 aa13.64□□□□□ -0.23
CIITA-202ENST00000381835 DESI2Q9BSY9 194 aa13.64□□□□□ -0.23
CIITA-202ENST00000381835 ARFGAP3Q9NP61 516 aa13.64□□□□□ -0.23
CIITA-202ENST00000381835 LARSQ9P2J5 1176 aaKnown RBP13.64□□□□□ -0.23
CIITA-202ENST00000381835 SEL1LQ9UBV2 794 aa13.64□□□□□ -0.23
CIITA-202ENST00000381835 HTTP42858 3142 aa13.64□□□□□ -0.23
CIITA-202ENST00000381835 LGALS2P05162 132 aa13.64□□□□□ -0.23
CIITA-202ENST00000381835 ZNF286BP0CG31 522 aa13.64□□□□□ -0.23
CIITA-202ENST00000381835 RSRC2Q7L4I2 434 aaKnown RBP13.64□□□□□ -0.23
CIITA-202ENST00000381835 GOLGA1Q92805 767 aa13.64□□□□□ -0.23
CIITA-202ENST00000381835 FAM167AQ96KS9 214 aa13.64□□□□□ -0.23
CIITA-202ENST00000381835 DUSP9Q99956 384 aaKnown RBP13.64□□□□□ -0.23
CIITA-202ENST00000381835 NIFKQ9BYG3 293 aaKnown RBP13.64□□□□□ -0.23
CIITA-202ENST00000381835 ATP6V0A4Q9HBG4 840 aa13.64□□□□□ -0.23
CIITA-202ENST00000381835 KAT6AQ92794 2004 aa13.64□□□□□ -0.23
CIITA-202ENST00000381835 GPR25O00155 361 aa13.63□□□□□ -0.23
CIITA-202ENST00000381835 SASH3O75995 380 aa13.63□□□□□ -0.23
CIITA-202ENST00000381835 OAS2P29728 719 aaKnown RBP13.63□□□□□ -0.23
CIITA-202ENST00000381835 SMC1AQ14683 1233 aaKnown RBP13.63□□□□□ -0.23
CIITA-202ENST00000381835 PLCB4Q15147 1175 aa13.63□□□□□ -0.23
CIITA-202ENST00000381835 ZC2HC1CQ53FD0 456 aaPredicted RBP13.63□□□□□ -0.23
CIITA-202ENST00000381835 CSGALNACT2Q8N6G5 542 aa13.63□□□□□ -0.23
CIITA-202ENST00000381835 RABGGTAQ92696 567 aa13.63□□□□□ -0.23
CIITA-202ENST00000381835 FIZ1Q96SL8 496 aa13.63□□□□□ -0.23
CIITA-202ENST00000381835 TIPINQ9BVW5 301 aa13.63□□□□□ -0.23
CIITA-202ENST00000381835 PARD6BQ9BYG5 372 aa13.63□□□□□ -0.23
CIITA-202ENST00000381835 XPNPEP1Q9NQW7 623 aa13.63□□□□□ -0.23
CIITA-202ENST00000381835 TRPC6Q9Y210 931 aa13.63□□□□□ -0.23
CIITA-202ENST00000381835 CASP8AP2Q9UKL3 1982 aa13.63□□□□□ -0.23
CIITA-202ENST00000381835 EVPLQ92817 2033 aa13.63□□□□□ -0.23
CIITA-202ENST00000381835 AKR1B15C9JRZ8 316 aaPredicted RBP13.63□□□□□ -0.23
CIITA-202ENST00000381835 PPFIA4O75335 1185 aa13.63□□□□□ -0.23
CIITA-202ENST00000381835 IGHA2P01877 340 aa13.63□□□□□ -0.23
CIITA-202ENST00000381835 CCDC175P0C221 793 aa13.63□□□□□ -0.23
CIITA-202ENST00000381835 PLS3P13797 630 aa13.63□□□□□ -0.23
CIITA-202ENST00000381835 PEX3P56589 373 aa13.63□□□□□ -0.23
CIITA-202ENST00000381835 KCNA1Q09470 495 aa13.63□□□□□ -0.23
CIITA-202ENST00000381835 IRF5Q13568 498 aa13.63□□□□□ -0.23
CIITA-202ENST00000381835 NR1I3Q14994 352 aa13.63□□□□□ -0.23
CIITA-202ENST00000381835 EMC2Q15006 297 aa13.63□□□□□ -0.23
CIITA-202ENST00000381835 MFSD14CQ5VZR4 134 aa13.63□□□□□ -0.23
CIITA-202ENST00000381835 EPM2AIP1Q7L775 607 aaPredicted RBP13.63□□□□□ -0.23
CIITA-202ENST00000381835 ZNF720Q7Z2F6 126 aa13.63□□□□□ -0.23
CIITA-202ENST00000381835 TLK2Q86UE8 772 aa13.63□□□□□ -0.23
CIITA-202ENST00000381835 KSR1Q8IVT5 923 aa13.63□□□□□ -0.23
CIITA-202ENST00000381835 MCPH1Q8NEM0 835 aa13.63□□□□□ -0.23
CIITA-202ENST00000381835 ATP8B4Q8TF62 1192 aa13.63□□□□□ -0.23
CIITA-202ENST00000381835 SLC7A3Q8WY07 619 aa13.63□□□□□ -0.23
CIITA-202ENST00000381835 ERAP1Q9NZ08 941 aa13.63□□□□□ -0.23
CIITA-202ENST00000381835 FAM184BQ9ULE4 1060 aa13.63□□□□□ -0.23
CIITA-202ENST00000381835 GNEQ9Y223 722 aaKnown RBP13.63□□□□□ -0.23
CIITA-202ENST00000381835 K7ENM7 598 aa13.62□□□□□ -0.23
CIITA-202ENST00000381835 MMP3P08254 477 aa13.62□□□□□ -0.23
CIITA-202ENST00000381835 SLC26A2P50443 739 aa13.62□□□□□ -0.23
CIITA-202ENST00000381835 HNRNPH2P55795 449 aaKnown RBP13.62□□□□□ -0.23
CIITA-202ENST00000381835 CDKAL1Q5VV42 579 aa13.62□□□□□ -0.23
CIITA-202ENST00000381835 TMEM143Q96AN5 459 aa13.62□□□□□ -0.23
CIITA-202ENST00000381835 TSG101Q99816 390 aa13.62□□□□□ -0.23
CIITA-202ENST00000381835 UBXN6Q9BZV1 441 aa13.62□□□□□ -0.23
CIITA-202ENST00000381835 RNPEPQ9H4A4 650 aa13.62□□□□□ -0.23
CIITA-202ENST00000381835 DHX33Q9H6R0 707 aaKnown RBP13.62□□□□□ -0.23
CIITA-202ENST00000381835 PDLIM7Q9NR12 457 aa13.62□□□□□ -0.23
CIITA-202ENST00000381835 CNGA1P29973 690 aa13.62□□□□□ -0.23
CIITA-202ENST00000381835 IRX5P78411 483 aaPredicted RBP13.62□□□□□ -0.23
CIITA-202ENST00000381835 LRRC63Q05C16 580 aa13.62□□□□□ -0.23
CIITA-202ENST00000381835 TRIM32Q13049 653 aa13.62□□□□□ -0.23
CIITA-202ENST00000381835 MTF1Q14872 753 aa13.62□□□□□ -0.23
CIITA-202ENST00000381835 TARBP2Q15633 366 aaKnown RBP13.62□□□□□ -0.23
CIITA-202ENST00000381835 DGKDQ16760 1214 aa13.62□□□□□ -0.23
CIITA-202ENST00000381835 TRPV1Q8NER1 839 aa13.62□□□□□ -0.23
CIITA-202ENST00000381835 KIFAP3Q92845 792 aa13.62□□□□□ -0.23
CIITA-202ENST00000381835 CEP89Q96ST8 783 aa13.62□□□□□ -0.23
CIITA-202ENST00000381835 KCTD10Q9H3F6 313 aa13.62□□□□□ -0.23
CIITA-202ENST00000381835 BRCA2P51587 3418 aa13.61□□□□□ -0.23
CIITA-202ENST00000381835 A0A1B0GTH6 734 aa13.61□□□□□ -0.23
CIITA-202ENST00000381835 SOWAHDA6NJG2 315 aa13.61□□□□□ -0.23
CIITA-202ENST00000381835 CCDC169A6NNP5 214 aa13.61□□□□□ -0.23
CIITA-202ENST00000381835 ELNP15502 786 aa13.61□□□□□ -0.23
CIITA-202ENST00000381835 HOXD10P28358 340 aa13.61□□□□□ -0.23
CIITA-202ENST00000381835 HOXD13P35453 343 aa13.61□□□□□ -0.23
CIITA-202ENST00000381835 TBC1D8BQ0IIM8 1120 aa13.61□□□□□ -0.23
CIITA-202ENST00000381835 KNOP1Q1ED39 458 aaKnown RBP13.61□□□□□ -0.23
CIITA-202ENST00000381835 PPFIBP1Q86W92 1011 aa13.61□□□□□ -0.23
CIITA-202ENST00000381835 TXLNBQ8N3L3 684 aa13.61□□□□□ -0.23
CIITA-202ENST00000381835 ZNF507Q8TCN5 953 aa13.61□□□□□ -0.23
CIITA-202ENST00000381835 TRAPPC12Q8WVT3 735 aa13.61□□□□□ -0.23
CIITA-202ENST00000381835 BSNDQ8WZ55 320 aa13.61□□□□□ -0.23
CIITA-202ENST00000381835 PANX2Q96RD6 677 aa13.61□□□□□ -0.23
CIITA-202ENST00000381835 C16orf70Q9BSU1 422 aa13.61□□□□□ -0.23
CIITA-202ENST00000381835 POLR3FQ9H1D9 316 aaPredicted RBP13.61□□□□□ -0.23
CIITA-202ENST00000381835 LZTFL1Q9NQ48 299 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms