RNA–Protein interactions for RNA: ENST00000381513.8

SMARCD1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 1 (best) BASIC

Gene SMARCD1, Length 3,237 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-201ENST00000381513 NT5DC3Q86UY8 548 aa20.42■□□□□ 0.86
SMARCD1-201ENST00000381513 RNF168Q8IYW5 571 aaPredicted RBP20.42■□□□□ 0.86
SMARCD1-201ENST00000381513 SPATA16Q9BXB7 569 aa20.42■□□□□ 0.86
SMARCD1-201ENST00000381513 LNPEPQ9UIQ6 1025 aa20.42■□□□□ 0.86
SMARCD1-201ENST00000381513 NRXN3Q9Y4C0 1643 aa20.42■□□□□ 0.86
SMARCD1-201ENST00000381513 LRRC63Q05C16 580 aa20.42■□□□□ 0.86
SMARCD1-201ENST00000381513 MPP2Q14168 576 aa20.42■□□□□ 0.86
SMARCD1-201ENST00000381513 ARHGEF18Q6ZSZ5 1173 aa20.42■□□□□ 0.86
SMARCD1-201ENST00000381513 RFX8Q6ZV50 586 aa20.42■□□□□ 0.86
SMARCD1-201ENST00000381513 SNRNP27Q8WVK2 155 aaKnown RBP20.42■□□□□ 0.86
SMARCD1-201ENST00000381513 TAOK3Q9H2K8 898 aa20.42■□□□□ 0.86
SMARCD1-201ENST00000381513 USP20Q9Y2K6 914 aa20.42■□□□□ 0.86
SMARCD1-201ENST00000381513 ATP5DP30049 168 aa20.42■□□□□ 0.86
SMARCD1-201ENST00000381513 CDR2Q01850 454 aa20.42■□□□□ 0.86
SMARCD1-201ENST00000381513 MKRN3Q13064 507 aaKnown RBP20.42■□□□□ 0.86
SMARCD1-201ENST00000381513 MAPK7Q13164 816 aa20.42■□□□□ 0.86
SMARCD1-201ENST00000381513 LRRC55Q6ZSA7 311 aa20.42■□□□□ 0.86
SMARCD1-201ENST00000381513 VPS36Q86VN1 386 aa20.42■□□□□ 0.86
SMARCD1-201ENST00000381513 PIK3C2AO00443 1686 aa20.42■□□□□ 0.86
SMARCD1-201ENST00000381513 FAM187AA6NFU0 413 aa20.41■□□□□ 0.86
SMARCD1-201ENST00000381513 NBPF26B4DH59 902 aa20.41■□□□□ 0.86
SMARCD1-201ENST00000381513 HNRNPCP07910 306 aaKnown RBP eCLIP20.41■□□□□ 0.86
SMARCD1-201ENST00000381513 SFSWAPQ12872 951 aaKnown RBP20.41■□□□□ 0.86
SMARCD1-201ENST00000381513 CERKLQ49MI3 558 aaPredicted RBP20.41■□□□□ 0.86
SMARCD1-201ENST00000381513 NBPF15Q8N660 670 aa20.41■□□□□ 0.86
SMARCD1-201ENST00000381513 TTLL11Q8NHH1 800 aa20.41■□□□□ 0.86
SMARCD1-201ENST00000381513 INPP5DQ92835 1189 aa20.41■□□□□ 0.86
SMARCD1-201ENST00000381513 CENPKQ9BS16 269 aa20.41■□□□□ 0.86
SMARCD1-201ENST00000381513 YIPF2Q9BWQ6 316 aa20.41■□□□□ 0.86
SMARCD1-201ENST00000381513 OSGEPQ9NPF4 335 aa20.41■□□□□ 0.86
SMARCD1-201ENST00000381513 TMOD4Q9NZQ9 345 aa20.41■□□□□ 0.86
SMARCD1-201ENST00000381513 LARSQ9P2J5 1176 aaKnown RBP20.41■□□□□ 0.86
SMARCD1-201ENST00000381513 PFASO15067 1338 aa20.41■□□□□ 0.86
SMARCD1-201ENST00000381513 A0A1W2PRG0 241 aa20.41■□□□□ 0.86
SMARCD1-201ENST00000381513 PDLIM1O00151 329 aa20.41■□□□□ 0.86
SMARCD1-201ENST00000381513 ZNF189O75820 626 aaPredicted RBP20.41■□□□□ 0.86
SMARCD1-201ENST00000381513 CALM1P0DP23 149 aa20.41■□□□□ 0.86
SMARCD1-201ENST00000381513 CALM2P0DP24 149 aa20.41■□□□□ 0.86
SMARCD1-201ENST00000381513 CALM3P0DP25 149 aa20.41■□□□□ 0.86
SMARCD1-201ENST00000381513 P3H1Q32P28 736 aa20.41■□□□□ 0.86
SMARCD1-201ENST00000381513 CFAP157Q5JU67 520 aa20.41■□□□□ 0.86
SMARCD1-201ENST00000381513 DSTYKQ6XUX3 929 aa20.41■□□□□ 0.86
SMARCD1-201ENST00000381513 USP40Q9NVE5 1235 aa20.41■□□□□ 0.86
SMARCD1-201ENST00000381513 LRP2BPQ9P2M1 347 aa20.41■□□□□ 0.86
SMARCD1-201ENST00000381513 BZW2Q9Y6E2 419 aaKnown RBP20.41■□□□□ 0.86
SMARCD1-201ENST00000381513 SPATA31D3P0C874 917 aa20.4■□□□□ 0.86
SMARCD1-201ENST00000381513 FKBP3Q00688 224 aaKnown RBP20.4■□□□□ 0.86
SMARCD1-201ENST00000381513 MAP7Q14244 749 aa20.4■□□□□ 0.86
SMARCD1-201ENST00000381513 C10orf76Q5T2E6 689 aa20.4■□□□□ 0.86
SMARCD1-201ENST00000381513 SPATA31D4Q6ZUB0 917 aa20.4■□□□□ 0.86
SMARCD1-201ENST00000381513 GUF1Q8N442 669 aaKnown RBP20.4■□□□□ 0.86
SMARCD1-201ENST00000381513 SLC7A6OSQ96CW6 309 aaPredicted RBP20.4■□□□□ 0.86
SMARCD1-201ENST00000381513 MAGEF1Q9HAY2 307 aa20.4■□□□□ 0.86
SMARCD1-201ENST00000381513 PITPNM2Q9BZ72 1349 aa20.4■□□□□ 0.86
SMARCD1-201ENST00000381513 SNAP23O00161 211 aa20.4■□□□□ 0.86
SMARCD1-201ENST00000381513 INHBCP55103 352 aa20.4■□□□□ 0.86
SMARCD1-201ENST00000381513 SCYL3Q8IZE3 742 aa20.4■□□□□ 0.86
SMARCD1-201ENST00000381513 SPATA5Q8NB90 893 aa20.4■□□□□ 0.86
SMARCD1-201ENST00000381513 NRG4Q8WWG1 115 aa20.4■□□□□ 0.86
SMARCD1-201ENST00000381513 CRAMP1Q96RY5 1269 aa20.4■□□□□ 0.86
SMARCD1-201ENST00000381513 NLRP2Q9NX02 1062 aa20.4■□□□□ 0.86
SMARCD1-201ENST00000381513 SPEF2Q9C093 1822 aa20.4■□□□□ 0.86
SMARCD1-201ENST00000381513 MYMKA6NI61 221 aa20.4■□□□□ 0.86
SMARCD1-201ENST00000381513 NMT2O60551 498 aa20.4■□□□□ 0.86
SMARCD1-201ENST00000381513 STRN3Q13033 797 aa20.4■□□□□ 0.86
SMARCD1-201ENST00000381513 LARP7Q4G0J3 582 aaKnown RBP eCLIP20.4■□□□□ 0.86
SMARCD1-201ENST00000381513 AADACL2Q6P093 401 aa20.4■□□□□ 0.86
SMARCD1-201ENST00000381513 CCDC105Q8IYK2 499 aa20.4■□□□□ 0.86
SMARCD1-201ENST00000381513 MCUR1Q96AQ8 359 aa20.4■□□□□ 0.86
SMARCD1-201ENST00000381513 GRAMD1AQ96CP6 724 aa20.4■□□□□ 0.86
SMARCD1-201ENST00000381513 CCDC97Q96F63 343 aaPredicted RBP20.4■□□□□ 0.86
SMARCD1-201ENST00000381513 RUNDC3BQ96NL0 473 aa20.4■□□□□ 0.86
SMARCD1-201ENST00000381513 SEPT11Q9NVA2 429 aaKnown RBP20.4■□□□□ 0.86
SMARCD1-201ENST00000381513 AIPL1Q9NZN9 384 aa20.4■□□□□ 0.86
SMARCD1-201ENST00000381513 CCNT1O60563 726 aaKnown RBP20.39■□□□□ 0.85
SMARCD1-201ENST00000381513 OPHN1O60890 802 aa20.39■□□□□ 0.85
SMARCD1-201ENST00000381513 TMCC1O94876 653 aa20.39■□□□□ 0.85
SMARCD1-201ENST00000381513 LYNP07948 512 aa20.39■□□□□ 0.85
SMARCD1-201ENST00000381513 CCDC15Q0P6D6 951 aa20.39■□□□□ 0.85
SMARCD1-201ENST00000381513 KPNB1Q14974 876 aaKnown RBP20.39■□□□□ 0.85
SMARCD1-201ENST00000381513 LLGL1Q15334 1064 aa20.39■□□□□ 0.85
SMARCD1-201ENST00000381513 PFKFB3Q16875 520 aaPredicted RBP20.39■□□□□ 0.85
SMARCD1-201ENST00000381513 EXOC3L4Q17RC7 722 aa20.39■□□□□ 0.85
SMARCD1-201ENST00000381513 MAGEB18Q96M61 343 aa20.39■□□□□ 0.85
SMARCD1-201ENST00000381513 UQCRFS1P1P0C7P4 283 aa20.39■□□□□ 0.85
SMARCD1-201ENST00000381513 GNAT2P19087 354 aa20.39■□□□□ 0.85
SMARCD1-201ENST00000381513 RTP1P59025 263 aa20.39■□□□□ 0.85
SMARCD1-201ENST00000381513 IL9RQ01113 521 aa20.39■□□□□ 0.85
SMARCD1-201ENST00000381513 CALCOCO2Q13137 446 aa20.39■□□□□ 0.85
SMARCD1-201ENST00000381513 PPP2R5EQ16537 467 aa20.39■□□□□ 0.85
SMARCD1-201ENST00000381513 SH2D4BQ5SQS7 431 aa20.39■□□□□ 0.85
SMARCD1-201ENST00000381513 SYNE4Q8N205 404 aa20.39■□□□□ 0.85
SMARCD1-201ENST00000381513 MARCH10Q8NA82 808 aaPredicted RBP20.39■□□□□ 0.85
SMARCD1-201ENST00000381513 KCNH5Q8NCM2 988 aa20.39■□□□□ 0.85
SMARCD1-201ENST00000381513 WDR66Q8TBY9 1149 aa20.39■□□□□ 0.85
SMARCD1-201ENST00000381513 SPOCK2Q92563 424 aa20.39■□□□□ 0.85
SMARCD1-201ENST00000381513 ATP8A2Q9NTI2 1148 aa20.39■□□□□ 0.85
SMARCD1-201ENST00000381513 GRHL1Q9NZI5 618 aa20.39■□□□□ 0.85
SMARCD1-201ENST00000381513 PARP2Q9UGN5 583 aa20.39■□□□□ 0.85
SMARCD1-201ENST00000381513 PPP1R9AQ9ULJ8 1098 aa20.39■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms