RNA–Protein interactions for RNA: ENST00000380654.8

EBF1-202, Transcript of early B cell factor 1, humanhuman

TSL 1 (best) BASIC

Gene EBF1, Length 2,345 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EBF1-202ENST00000380654 ICAM1P05362 532 aa21.79■■□□□ 1.08
EBF1-202ENST00000380654 IVLP07476 585 aa21.79■■□□□ 1.08
EBF1-202ENST00000380654 ITGA4P13612 1032 aa21.79■■□□□ 1.08
EBF1-202ENST00000380654 SLC35G2Q8TBE7 412 aa21.79■■□□□ 1.08
EBF1-202ENST00000380654 CLEC4DQ8WXI8 215 aa21.79■■□□□ 1.08
EBF1-202ENST00000380654 PIK3R5Q8WYR1 880 aa21.79■■□□□ 1.08
EBF1-202ENST00000380654 SYT11Q9BT88 431 aa21.79■■□□□ 1.08
EBF1-202ENST00000380654 DDX47Q9H0S4 455 aaKnown RBP21.79■■□□□ 1.08
EBF1-202ENST00000380654 SAMM50Q9Y512 469 aa21.79■■□□□ 1.08
EBF1-202ENST00000380654 ZHX2Q9Y6X8 837 aa21.79■■□□□ 1.08
EBF1-202ENST00000380654 LOXHD1Q8IVV2 1947 aa21.79■■□□□ 1.08
EBF1-202ENST00000380654 A0A0A6YYK5 440 aaPredicted RBP21.79■■□□□ 1.08
EBF1-202ENST00000380654 GOLGA8KD6RF30 607 aa21.79■■□□□ 1.08
EBF1-202ENST00000380654 SPP2Q13103 211 aa21.79■■□□□ 1.08
EBF1-202ENST00000380654 KCTD16Q68DU8 428 aa21.79■■□□□ 1.08
EBF1-202ENST00000380654 TTC19Q6DKK2 380 aaPredicted RBP21.79■■□□□ 1.08
EBF1-202ENST00000380654 DDX42Q86XP3 938 aaKnown RBP eCLIP21.79■■□□□ 1.08
EBF1-202ENST00000380654 IQCKQ8N0W5 287 aa21.79■■□□□ 1.08
EBF1-202ENST00000380654 SH2D3CQ8N5H7 860 aa21.79■■□□□ 1.08
EBF1-202ENST00000380654 TTLL6Q8N841 843 aa21.79■■□□□ 1.08
EBF1-202ENST00000380654 PGAP2Q9UHJ9 254 aa21.79■■□□□ 1.08
EBF1-202ENST00000380654 ZNF233A6NK53 670 aa21.78■■□□□ 1.08
EBF1-202ENST00000380654 PGRMC1O00264 195 aaKnown RBP21.78■■□□□ 1.08
EBF1-202ENST00000380654 OPA1O60313 960 aa21.78■■□□□ 1.08
EBF1-202ENST00000380654 BUB1BO60566 1050 aaPredicted RBP21.78■■□□□ 1.08
EBF1-202ENST00000380654 PPP2R5AQ15172 486 aa21.78■■□□□ 1.08
EBF1-202ENST00000380654 LMO3Q8TAP4 145 aa21.78■■□□□ 1.08
EBF1-202ENST00000380654 BUD13Q9BRD0 619 aaKnown RBP eCLIP21.78■■□□□ 1.08
EBF1-202ENST00000380654 SEPT11Q9NVA2 429 aaKnown RBP21.78■■□□□ 1.08
EBF1-202ENST00000380654 INTUQ9ULD6 942 aa21.78■■□□□ 1.08
EBF1-202ENST00000380654 FOXN3O00409 490 aaPredicted RBP21.78■■□□□ 1.08
EBF1-202ENST00000380654 SHOX2O60902 331 aaPredicted RBP21.78■■□□□ 1.08
EBF1-202ENST00000380654 MRPS9P82933 396 aaKnown RBP21.78■■□□□ 1.08
EBF1-202ENST00000380654 PPFIA1Q13136 1202 aa21.78■■□□□ 1.08
EBF1-202ENST00000380654 ARHGEF26Q96DR7 871 aa21.78■■□□□ 1.08
EBF1-202ENST00000380654 CBWD1Q9BRT8 395 aa21.78■■□□□ 1.08
EBF1-202ENST00000380654 SUCLA2Q9P2R7 463 aaPredicted RBP21.78■■□□□ 1.08
EBF1-202ENST00000380654 RSPH14Q9UHP6 348 aa21.78■■□□□ 1.08
EBF1-202ENST00000380654 RPTORQ8N122 1335 aa21.77■■□□□ 1.08
EBF1-202ENST00000380654 SART1O43290 800 aaKnown RBP21.77■■□□□ 1.08
EBF1-202ENST00000380654 ALAS1P13196 640 aa21.77■■□□□ 1.08
EBF1-202ENST00000380654 CFAP58Q5T655 872 aa21.77■■□□□ 1.08
EBF1-202ENST00000380654 RABEP2Q9H5N1 569 aa21.77■■□□□ 1.08
EBF1-202ENST00000380654 PPP1R9AQ9ULJ8 1098 aa21.77■■□□□ 1.08
EBF1-202ENST00000380654 EMSYQ7Z589 1322 aa21.77■■□□□ 1.08
EBF1-202ENST00000380654 P4HBP07237 508 aaKnown RBP21.77■■□□□ 1.07
EBF1-202ENST00000380654 ASNSP08243 561 aa21.77■■□□□ 1.07
EBF1-202ENST00000380654 LMNB1P20700 586 aa21.77■■□□□ 1.07
EBF1-202ENST00000380654 ECHS1P30084 290 aa21.77■■□□□ 1.07
EBF1-202ENST00000380654 TKFCQ3LXA3 575 aa21.77■■□□□ 1.07
EBF1-202ENST00000380654 SLC9A9Q8IVB4 645 aa21.77■■□□□ 1.07
EBF1-202ENST00000380654 LMBR1Q8WVP7 490 aa21.77■■□□□ 1.07
EBF1-202ENST00000380654 HES6Q96HZ4 224 aa21.77■■□□□ 1.07
EBF1-202ENST00000380654 RAVER2Q9HCJ3 691 aaKnown RBP21.77■■□□□ 1.07
EBF1-202ENST00000380654 UTP3Q9NQZ2 479 aaKnown RBP eCLIP21.77■■□□□ 1.07
EBF1-202ENST00000380654 ATP8B3O60423 1300 aa21.76■■□□□ 1.07
EBF1-202ENST00000380654 KRIT1O00522 736 aa21.76■■□□□ 1.07
EBF1-202ENST00000380654 WNT10BO00744 389 aa21.76■■□□□ 1.07
EBF1-202ENST00000380654 RARRES1P49788 294 aa21.76■■□□□ 1.07
EBF1-202ENST00000380654 IRAK1P51617 712 aa21.76■■□□□ 1.07
EBF1-202ENST00000380654 IRX5P78411 483 aaPredicted RBP21.76■■□□□ 1.07
EBF1-202ENST00000380654 EN1Q05925 392 aaPredicted RBP21.76■■□□□ 1.07
EBF1-202ENST00000380654 PPP3CAQ08209 521 aa21.76■■□□□ 1.07
EBF1-202ENST00000380654 HLTFQ14527 1009 aaKnown RBP eCLIP21.76■■□□□ 1.07
EBF1-202ENST00000380654 RTKN2Q8IZC4 609 aa21.76■■□□□ 1.07
EBF1-202ENST00000380654 SLC20A1Q8WUM9 679 aa21.76■■□□□ 1.07
EBF1-202ENST00000380654 PSMD1Q99460 953 aa21.76■■□□□ 1.07
EBF1-202ENST00000380654 THAP2Q9H0W7 228 aa21.76■■□□□ 1.07
EBF1-202ENST00000380654 DEFB129Q9H1M3 183 aa21.76■■□□□ 1.07
EBF1-202ENST00000380654 TAF1DQ9H5J8 278 aaPredicted RBP21.76■■□□□ 1.07
EBF1-202ENST00000380654 AGO4Q9HCK5 861 aaKnown RBP21.76■■□□□ 1.07
EBF1-202ENST00000380654 GPRC5CQ9NQ84 441 aa21.76■■□□□ 1.07
EBF1-202ENST00000380654 TULP1O00294 542 aaPredicted RBP21.75■■□□□ 1.07
EBF1-202ENST00000380654 BCRP11274 1271 aa21.75■■□□□ 1.07
EBF1-202ENST00000380654 UGCGQ16739 394 aa21.75■■□□□ 1.07
EBF1-202ENST00000380654 SRLQ86TD4 932 aa21.75■■□□□ 1.07
EBF1-202ENST00000380654 FAM83AQ86UY5 434 aa21.75■■□□□ 1.07
EBF1-202ENST00000380654 ARHGEF19Q8IW93 802 aa21.75■■□□□ 1.07
EBF1-202ENST00000380654 SYCE1Q8N0S2 351 aa21.75■■□□□ 1.07
EBF1-202ENST00000380654 RFFLQ8WZ73 363 aa21.75■■□□□ 1.07
EBF1-202ENST00000380654 AMACRQ9UHK6 382 aa21.75■■□□□ 1.07
EBF1-202ENST00000380654 RRP15Q9Y3B9 282 aaKnown RBP21.75■■□□□ 1.07
EBF1-202ENST00000380654 EIF2AK2P19525 551 aaKnown RBP21.75■■□□□ 1.07
EBF1-202ENST00000380654 GCLMP48507 274 aa21.75■■□□□ 1.07
EBF1-202ENST00000380654 FKBP1CQ5VVH2 108 aa21.75■■□□□ 1.07
EBF1-202ENST00000380654 RASGEF1CQ8N431 466 aa21.75■■□□□ 1.07
EBF1-202ENST00000380654 CTNNBL1Q8WYA6 563 aaPredicted RBP21.75■■□□□ 1.07
EBF1-202ENST00000380654 ISCUQ9H1K1 167 aa21.75■■□□□ 1.07
EBF1-202ENST00000380654 NEUROG2Q9H2A3 272 aa21.75■■□□□ 1.07
EBF1-202ENST00000380654 UBE2TQ9NPD8 197 aaPredicted RBP21.75■■□□□ 1.07
EBF1-202ENST00000380654 LARSQ9P2J5 1176 aaKnown RBP21.75■■□□□ 1.07
EBF1-202ENST00000380654 AMFRQ9UKV5 643 aa21.75■■□□□ 1.07
EBF1-202ENST00000380654 NCANO14594 1321 aa21.75■■□□□ 1.07
EBF1-202ENST00000380654 TRIM66O15016 1216 aa21.74■■□□□ 1.07
EBF1-202ENST00000380654 TMEM253P0C7T8 217 aa21.74■■□□□ 1.07
EBF1-202ENST00000380654 TNFAIP3P21580 790 aa21.74■■□□□ 1.07
EBF1-202ENST00000380654 NPEPPSP55786 919 aa21.74■■□□□ 1.07
EBF1-202ENST00000380654 DCAF12L1Q5VU92 463 aa21.74■■□□□ 1.07
EBF1-202ENST00000380654 MREGQ8N565 214 aa21.74■■□□□ 1.07
EBF1-202ENST00000380654 PRPF38AQ8NAV1 312 aaKnown RBP21.74■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms