RNA–Protein interactions for RNA: ENST00000380358.8

CHD3-203, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2 BASIC

Gene CHD3, Length 7,356 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-203ENST00000380358 CENPKQ9BS16 269 aa13.23□□□□□ -0.29
CHD3-203ENST00000380358 E9PMD0 336 aa13.23□□□□□ -0.29
CHD3-203ENST00000380358 WDR47O94967 919 aa13.23□□□□□ -0.29
CHD3-203ENST00000380358 RPS6P62753 249 aaKnown RBP13.23□□□□□ -0.29
CHD3-203ENST00000380358 BTKQ06187 659 aa13.23□□□□□ -0.29
CHD3-203ENST00000380358 VEPH1Q14D04 833 aa13.23□□□□□ -0.29
CHD3-203ENST00000380358 C1orf146Q5VVC0 180 aa13.23□□□□□ -0.29
CHD3-203ENST00000380358 CENPUQ71F23 418 aa13.23□□□□□ -0.29
CHD3-203ENST00000380358 NLRP9Q7RTR0 991 aa13.23□□□□□ -0.29
CHD3-203ENST00000380358 TRIM48Q8IWZ4 208 aa13.23□□□□□ -0.29
CHD3-203ENST00000380358 JADE3Q92613 823 aa13.23□□□□□ -0.29
CHD3-203ENST00000380358 BCL2L14Q9BZR8 327 aa13.23□□□□□ -0.29
CHD3-203ENST00000380358 DHX35Q9H5Z1 703 aaKnown RBP13.23□□□□□ -0.29
CHD3-203ENST00000380358 GIMAP4Q9NUV9 329 aa13.23□□□□□ -0.29
CHD3-203ENST00000380358 SLAIN2Q9P270 581 aa13.23□□□□□ -0.29
CHD3-203ENST00000380358 TCP1P17987 556 aaKnown RBP13.23□□□□□ -0.29
CHD3-203ENST00000380358 SNX31Q8N9S9 440 aa13.23□□□□□ -0.29
CHD3-203ENST00000380358 OR9Q1Q8NGQ5 310 aa13.23□□□□□ -0.29
CHD3-203ENST00000380358 OTUB1Q96FW1 271 aaPredicted RBP13.23□□□□□ -0.29
CHD3-203ENST00000380358 DENND4BO75064 1496 aaPredicted RBP13.23□□□□□ -0.29
CHD3-203ENST00000380358 GH2P01242 217 aa13.23□□□□□ -0.29
CHD3-203ENST00000380358 ETFBP38117 255 aa13.23□□□□□ -0.29
CHD3-203ENST00000380358 NSD2O96028 1365 aa13.22□□□□□ -0.29
CHD3-203ENST00000380358 SLC16A4O15374 487 aa13.22□□□□□ -0.29
CHD3-203ENST00000380358 TADA2AO75478 443 aa13.22□□□□□ -0.29
CHD3-203ENST00000380358 MAPK9P45984 424 aa13.22□□□□□ -0.29
CHD3-203ENST00000380358 MRPS15P82914 257 aaKnown RBP13.22□□□□□ -0.29
CHD3-203ENST00000380358 DR1Q01658 176 aa13.22□□□□□ -0.29
CHD3-203ENST00000380358 ZNF746Q6NUN9 644 aaPredicted RBP13.22□□□□□ -0.29
CHD3-203ENST00000380358 FGD2Q7Z6J4 655 aa13.22□□□□□ -0.29
CHD3-203ENST00000380358 SLC44A2Q8IWA5 706 aaPredicted RBP13.22□□□□□ -0.29
CHD3-203ENST00000380358 BCL2L12Q9HB09 334 aa13.22□□□□□ -0.29
CHD3-203ENST00000380358 ZBTB40Q9NUA8 1239 aa13.22□□□□□ -0.29
CHD3-203ENST00000380358 SEMA3FQ13275 785 aa13.22□□□□□ -0.29
CHD3-203ENST00000380358 ANGPTL2Q9UKU9 493 aa13.22□□□□□ -0.29
CHD3-203ENST00000380358 CAB39Q9Y376 341 aaPredicted RBP13.22□□□□□ -0.29
CHD3-203ENST00000380358 SPTLC1O15269 473 aa13.22□□□□□ -0.29
CHD3-203ENST00000380358 GYG2O15488 501 aa13.22□□□□□ -0.29
CHD3-203ENST00000380358 TLR2O60603 784 aa13.22□□□□□ -0.29
CHD3-203ENST00000380358 DARSP14868 501 aaKnown RBP13.22□□□□□ -0.29
CHD3-203ENST00000380358 NR5A1Q13285 461 aa13.22□□□□□ -0.29
CHD3-203ENST00000380358 TOMM20Q15388 145 aa13.22□□□□□ -0.29
CHD3-203ENST00000380358 PCDHA7Q9UN72 937 aa13.22□□□□□ -0.29
CHD3-203ENST00000380358 UBE4BO95155 1302 aa13.22□□□□□ -0.29
CHD3-203ENST00000380358 XDHP47989 1333 aa13.22□□□□□ -0.29
CHD3-203ENST00000380358 ALDH1A1P00352 501 aa13.22□□□□□ -0.29
CHD3-203ENST00000380358 GSNP06396 782 aa13.22□□□□□ -0.29
CHD3-203ENST00000380358 WEE1P30291 646 aa13.22□□□□□ -0.29
CHD3-203ENST00000380358 EIF4A3P38919 411 aaKnown RBP13.22□□□□□ -0.29
CHD3-203ENST00000380358 RALGDSQ12967 914 aa13.22□□□□□ -0.29
CHD3-203ENST00000380358 CYTH1Q15438 398 aa13.22□□□□□ -0.29
CHD3-203ENST00000380358 GJC2Q5T442 439 aaPredicted RBP13.22□□□□□ -0.29
CHD3-203ENST00000380358 MFSD14CQ5VZR4 134 aa13.22□□□□□ -0.29
CHD3-203ENST00000380358 BTBD8Q5XKL5 378 aa13.22□□□□□ -0.29
CHD3-203ENST00000380358 LMBRD2Q68DH5 695 aaPredicted RBP13.22□□□□□ -0.29
CHD3-203ENST00000380358 SNRNP48Q6IEG0 339 aaKnown RBP13.22□□□□□ -0.29
CHD3-203ENST00000380358 NUDT18Q6ZVK8 323 aa13.22□□□□□ -0.29
CHD3-203ENST00000380358 MIER2Q8N344 545 aa13.22□□□□□ -0.29
CHD3-203ENST00000380358 SYT2Q8N9I0 419 aaPredicted RBP13.22□□□□□ -0.29
CHD3-203ENST00000380358 TRIM11Q96F44 468 aa13.22□□□□□ -0.29
CHD3-203ENST00000380358 IL1RL2Q9HB29 575 aa13.22□□□□□ -0.29
CHD3-203ENST00000380358 ZFYVE1Q9HBF4 777 aa13.22□□□□□ -0.29
CHD3-203ENST00000380358 EMILIN3Q9NT22 766 aa13.22□□□□□ -0.29
CHD3-203ENST00000380358 APOBEC2Q9Y235 224 aaKnown RBP13.22□□□□□ -0.29
CHD3-203ENST00000380358 FLAD1Q8NFF5 587 aa13.22□□□□□ -0.29
CHD3-203ENST00000380358 SPATA33Q96N06 139 aa13.22□□□□□ -0.29
CHD3-203ENST00000380358 TRIM54Q9BYV2 358 aa13.22□□□□□ -0.29
CHD3-203ENST00000380358 DONSONQ9NYP3 566 aa13.22□□□□□ -0.29
CHD3-203ENST00000380358 EIF4G3O43432 1585 aaKnown RBP13.21□□□□□ -0.29
CHD3-203ENST00000380358 ZNF211Q13398 564 aaPredicted RBP13.21□□□□□ -0.29
CHD3-203ENST00000380358 MAD2L2Q9UI95 211 aa13.21□□□□□ -0.29
CHD3-203ENST00000380358 ARAP1Q96P48 1450 aa13.21□□□□□ -0.29
CHD3-203ENST00000380358 LOC102724428A0A0B4J2F2 783 aa13.21□□□□□ -0.29
CHD3-203ENST00000380358 GOLGA8RI6L899 631 aa13.21□□□□□ -0.29
CHD3-203ENST00000380358 HOXD10P28358 340 aa13.21□□□□□ -0.29
CHD3-203ENST00000380358 MZF1P28698 734 aaPredicted RBP13.21□□□□□ -0.29
CHD3-203ENST00000380358 GCLMP48507 274 aa13.21□□□□□ -0.29
CHD3-203ENST00000380358 SIK1P57059 783 aa13.21□□□□□ -0.29
CHD3-203ENST00000380358 SCRN1Q12765 414 aa13.21□□□□□ -0.29
CHD3-203ENST00000380358 MTMR1Q13613 665 aa13.21□□□□□ -0.29
CHD3-203ENST00000380358 NLGN1Q8N2Q7 840 aa13.21□□□□□ -0.29
CHD3-203ENST00000380358 APOL5Q9BWW9 433 aa13.21□□□□□ -0.29
CHD3-203ENST00000380358 ZMYND12Q9H0C1 365 aa13.21□□□□□ -0.29
CHD3-203ENST00000380358 TDRD3Q9H7E2 651 aaKnown RBP13.21□□□□□ -0.29
CHD3-203ENST00000380358 ZNF711Q9Y462 761 aa13.21□□□□□ -0.29
CHD3-203ENST00000380358 MED23Q9ULK4 1368 aa13.21□□□□□ -0.29
CHD3-203ENST00000380358 CC2D2AQ9P2K1 1620 aa13.21□□□□□ -0.29
CHD3-203ENST00000380358 ZBTB7BO15156 539 aaPredicted RBP13.21□□□□□ -0.29
CHD3-203ENST00000380358 GFAPP14136 432 aa13.21□□□□□ -0.29
CHD3-203ENST00000380358 TRPC1P48995 793 aa13.21□□□□□ -0.29
CHD3-203ENST00000380358 NCALDP61601 193 aa13.21□□□□□ -0.29
CHD3-203ENST00000380358 E2F4Q16254 413 aa13.21□□□□□ -0.29
CHD3-203ENST00000380358 LRRC36Q1X8D7 754 aa13.21□□□□□ -0.29
CHD3-203ENST00000380358 ZBTB38Q8NAP3 1195 aaPredicted RBP13.21□□□□□ -0.29
CHD3-203ENST00000380358 DPF3Q92784 378 aa13.21□□□□□ -0.29
CHD3-203ENST00000380358 KIF12Q96FN5 646 aa13.21□□□□□ -0.29
CHD3-203ENST00000380358 KIFC3Q9BVG8 833 aa13.21□□□□□ -0.29
CHD3-203ENST00000380358 KDM4CQ9H3R0 1056 aa13.21□□□□□ -0.29
CHD3-203ENST00000380358 TMEM206Q9H813 350 aa13.21□□□□□ -0.29
CHD3-203ENST00000380358 H2AFY2Q9P0M6 372 aaPredicted RBP13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms