RNA–Protein interactions for RNA: ENST00000379599.6

NHLRC3-201, Transcript of NHL repeat containing 3, humanhuman

TSL 1 (best) BASIC

Gene NHLRC3, Length 3,275 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC3-201ENST00000379599 NT5C3AQ9H0P0 336 aa9.12□□□□□ -0.95
NHLRC3-201ENST00000379599 CCDC68Q9H2F9 335 aa9.12□□□□□ -0.95
NHLRC3-201ENST00000379599 STK32BQ9NY57 414 aa9.12□□□□□ -0.95
NHLRC3-201ENST00000379599 NDUFA13Q9P0J0 144 aa9.12□□□□□ -0.95
NHLRC3-201ENST00000379599 MTUS1Q9ULD2 1270 aa9.12□□□□□ -0.95
NHLRC3-201ENST00000379599 SH2B2O14492 632 aaPredicted RBP9.12□□□□□ -0.95
NHLRC3-201ENST00000379599 MAPK13O15264 365 aa9.12□□□□□ -0.95
NHLRC3-201ENST00000379599 APOEP02649 317 aa9.12□□□□□ -0.95
NHLRC3-201ENST00000379599 PPP1R2P41236 205 aa9.12□□□□□ -0.95
NHLRC3-201ENST00000379599 POLGP54098 1239 aaPredicted RBP9.12□□□□□ -0.95
NHLRC3-201ENST00000379599 ITGA9Q13797 1035 aa9.12□□□□□ -0.95
NHLRC3-201ENST00000379599 C16orf72Q14CZ0 275 aa9.12□□□□□ -0.95
NHLRC3-201ENST00000379599 BCL2A1Q16548 175 aa9.12□□□□□ -0.95
NHLRC3-201ENST00000379599 LRRC36Q1X8D7 754 aa9.12□□□□□ -0.95
NHLRC3-201ENST00000379599 PPP1R2P3Q6NXS1 205 aa9.12□□□□□ -0.95
NHLRC3-201ENST00000379599 C11orf74Q86VG3 221 aa9.12□□□□□ -0.95
NHLRC3-201ENST00000379599 IFNLR1Q8IU57 520 aaPredicted RBP9.12□□□□□ -0.95
NHLRC3-201ENST00000379599 EIF1ADQ8N9N8 165 aaKnown RBP9.12□□□□□ -0.95
NHLRC3-201ENST00000379599 SLC7A6OSQ96CW6 309 aaPredicted RBP9.12□□□□□ -0.95
NHLRC3-201ENST00000379599 INPP4AQ96PE3 977 aaPredicted RBP9.12□□□□□ -0.95
NHLRC3-201ENST00000379599 KIAA1522Q9P206 1035 aaPredicted RBP9.12□□□□□ -0.95
NHLRC3-201ENST00000379599 ARHGAP20Q9P2F6 1191 aa9.12□□□□□ -0.95
NHLRC3-201ENST00000379599 SFI1A8K8P3 1242 aa9.11□□□□□ -0.95
NHLRC3-201ENST00000379599 PRPF3O43395 683 aaKnown RBP9.11□□□□□ -0.95
NHLRC3-201ENST00000379599 ADAM23O75077 832 aa9.11□□□□□ -0.95
NHLRC3-201ENST00000379599 STAMBPO95630 424 aa9.11□□□□□ -0.95
NHLRC3-201ENST00000379599 MTIF2P46199 727 aaKnown RBP9.11□□□□□ -0.95
NHLRC3-201ENST00000379599 ACAP1Q15027 740 aa9.11□□□□□ -0.95
NHLRC3-201ENST00000379599 RPS6KA1Q15418 735 aa9.11□□□□□ -0.95
NHLRC3-201ENST00000379599 KLHDC10Q6PID8 442 aa9.11□□□□□ -0.95
NHLRC3-201ENST00000379599 NUP93Q8N1F7 819 aa9.11□□□□□ -0.95
NHLRC3-201ENST00000379599 CDK5RAP3Q96JB5 506 aa9.11□□□□□ -0.95
NHLRC3-201ENST00000379599 SETDB2Q96T68 719 aa9.11□□□□□ -0.95
NHLRC3-201ENST00000379599 TTC1Q99614 292 aa9.11□□□□□ -0.95
NHLRC3-201ENST00000379599 ECSITQ9BQ95 431 aa9.11□□□□□ -0.95
NHLRC3-201ENST00000379599 FHDC1Q9C0D6 1143 aaPredicted RBP9.11□□□□□ -0.95
NHLRC3-201ENST00000379599 LRRC27Q9C0I9 530 aa9.11□□□□□ -0.95
NHLRC3-201ENST00000379599 ARMC7Q9H6L4 198 aa9.11□□□□□ -0.95
NHLRC3-201ENST00000379599 FAM207AQ9NSI2 230 aaPredicted RBP9.11□□□□□ -0.95
NHLRC3-201ENST00000379599 GDAQ9Y2T3 454 aa9.11□□□□□ -0.95
NHLRC3-201ENST00000379599 PCDHB6Q9Y5E3 794 aa9.11□□□□□ -0.95
NHLRC3-201ENST00000379599 CD163L1Q9NR16 1453 aa9.11□□□□□ -0.95
NHLRC3-201ENST00000379599 MYH2Q9UKX2 1941 aa9.11□□□□□ -0.95
NHLRC3-201ENST00000379599 ABCA9Q8IUA7 1624 aa9.11□□□□□ -0.95
NHLRC3-201ENST00000379599 A0A087X0B3 334 aa9.11□□□□□ -0.95
NHLRC3-201ENST00000379599 RASGRF2O14827 1237 aa9.11□□□□□ -0.95
NHLRC3-201ENST00000379599 TBC1D12O60347 775 aa9.11□□□□□ -0.95
NHLRC3-201ENST00000379599 S100BP04271 92 aaPredicted RBP9.11□□□□□ -0.95
NHLRC3-201ENST00000379599 TFPTP0C1Z6 253 aa9.11□□□□□ -0.95
NHLRC3-201ENST00000379599 MYBP10242 640 aa9.11□□□□□ -0.95
NHLRC3-201ENST00000379599 LMNB1P20700 586 aa9.11□□□□□ -0.95
NHLRC3-201ENST00000379599 ITGA6P23229 1130 aa9.11□□□□□ -0.95
NHLRC3-201ENST00000379599 THOC5Q13769 683 aaKnown RBP9.11□□□□□ -0.95
NHLRC3-201ENST00000379599 LPIN1Q14693 890 aa9.11□□□□□ -0.95
NHLRC3-201ENST00000379599 CTC1Q2NKJ3 1217 aa9.11□□□□□ -0.95
NHLRC3-201ENST00000379599 RAVER1Q8IY67 606 aaKnown RBP9.11□□□□□ -0.95
NHLRC3-201ENST00000379599 DDHD1Q8NEL9 900 aa9.11□□□□□ -0.95
NHLRC3-201ENST00000379599 TRIM51Q9BSJ1 452 aa9.11□□□□□ -0.95
NHLRC3-201ENST00000379599 TUBGCP2Q9BSJ2 902 aa9.11□□□□□ -0.95
NHLRC3-201ENST00000379599 DNAJC17Q9NVM6 304 aaKnown RBP9.11□□□□□ -0.95
NHLRC3-201ENST00000379599 CHPF2Q9P2E5 772 aa9.11□□□□□ -0.95
NHLRC3-201ENST00000379599 HPS5Q9UPZ3 1129 aa9.11□□□□□ -0.95
NHLRC3-201ENST00000379599 LZTS1Q9Y250 596 aa9.11□□□□□ -0.95
NHLRC3-201ENST00000379599 QRICH2Q9H0J4 1663 aa9.11□□□□□ -0.95
NHLRC3-201ENST00000379599 UMODL1Q5DID0 1318 aa9.11□□□□□ -0.95
NHLRC3-201ENST00000379599 TSPY2A6NKD2 308 aa9.11□□□□□ -0.95
NHLRC3-201ENST00000379599 SLC26A4O43511 780 aa9.11□□□□□ -0.95
NHLRC3-201ENST00000379599 ZBED1O96006 694 aa9.11□□□□□ -0.95
NHLRC3-201ENST00000379599 TSPY3P0CV98 308 aa9.11□□□□□ -0.95
NHLRC3-201ENST00000379599 TSPY8P0CW00 308 aa9.11□□□□□ -0.95
NHLRC3-201ENST00000379599 CYP2C9P11712 490 aa9.11□□□□□ -0.95
NHLRC3-201ENST00000379599 GTF2H1P32780 548 aa9.11□□□□□ -0.95
NHLRC3-201ENST00000379599 PHBP35232 272 aa9.11□□□□□ -0.95
NHLRC3-201ENST00000379599 CCT8P50990 548 aa9.11□□□□□ -0.95
NHLRC3-201ENST00000379599 PLTPP55058 493 aa9.11□□□□□ -0.95
NHLRC3-201ENST00000379599 TSPY1Q01534 308 aa9.11□□□□□ -0.95
NHLRC3-201ENST00000379599 MSLNQ13421 630 aaPredicted RBP9.11□□□□□ -0.95
NHLRC3-201ENST00000379599 MED21Q13503 144 aa9.11□□□□□ -0.95
NHLRC3-201ENST00000379599 HSP90AA5PQ58FG0 334 aa9.11□□□□□ -0.95
NHLRC3-201ENST00000379599 Q6ZNX1 250 aa9.11□□□□□ -0.95
NHLRC3-201ENST00000379599 RRAGAQ7L523 313 aa9.11□□□□□ -0.95
NHLRC3-201ENST00000379599 PHLDB2Q86SQ0 1253 aa9.11□□□□□ -0.95
NHLRC3-201ENST00000379599 BPHLQ86WA6 291 aaPredicted RBP9.11□□□□□ -0.95
NHLRC3-201ENST00000379599 NOSTRINQ8IVI9 506 aa9.11□□□□□ -0.95
NHLRC3-201ENST00000379599 CCDC82Q8N4S0 544 aa9.11□□□□□ -0.95
NHLRC3-201ENST00000379599 CGREF1Q99674 301 aa9.11□□□□□ -0.95
NHLRC3-201ENST00000379599 SPZ1Q9BXG8 430 aa9.11□□□□□ -0.95
NHLRC3-201ENST00000379599 USP29Q9HBJ7 922 aa9.11□□□□□ -0.95
NHLRC3-201ENST00000379599 STX18Q9P2W9 335 aaKnown RBP9.11□□□□□ -0.95
NHLRC3-201ENST00000379599 ZNF212Q9UDV6 495 aa9.11□□□□□ -0.95
NHLRC3-201ENST00000379599 ANGPTL2Q9UKU9 493 aa9.11□□□□□ -0.95
NHLRC3-201ENST00000379599 TRAF3IP3Q9Y228 551 aa9.11□□□□□ -0.95
NHLRC3-201ENST00000379599 CHKBQ9Y259 395 aa9.11□□□□□ -0.95
NHLRC3-201ENST00000379599 GIT1Q9Y2X7 761 aa9.11□□□□□ -0.95
NHLRC3-201ENST00000379599 CTDP1Q9Y5B0 961 aaPredicted RBP9.11□□□□□ -0.95
NHLRC3-201ENST00000379599 NEURL4Q96JN8 1562 aa9.1□□□□□ -0.95
NHLRC3-201ENST00000379599 KIAA1210Q9ULL0 1709 aa9.1□□□□□ -0.95
NHLRC3-201ENST00000379599 ARHGEF10O15013 1369 aa9.1□□□□□ -0.95
NHLRC3-201ENST00000379599 MAP3K4Q9Y6R4 1608 aa9.1□□□□□ -0.95
NHLRC3-201ENST00000379599 PI4KAP2A4QPH2 592 aa9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms