RNA–Protein interactions for RNA: ENST00000379237.6

USP6NL-202, Transcript of USP6 N-terminal like, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene USP6NL, Length 4,546 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-202ENST00000379237 UQCRFS1P1P0C7P4 283 aa11.72□□□□□ -0.53
USP6NL-202ENST00000379237 MAGEA10P43363 369 aaPredicted RBP11.72□□□□□ -0.53
USP6NL-202ENST00000379237 MESDQ14696 234 aa11.72□□□□□ -0.53
USP6NL-202ENST00000379237 DDB1Q16531 1140 aa11.72□□□□□ -0.53
USP6NL-202ENST00000379237 LIN52Q52LA3 116 aa11.72□□□□□ -0.53
USP6NL-202ENST00000379237 ZNF572Q7Z3I7 529 aaPredicted RBP11.72□□□□□ -0.53
USP6NL-202ENST00000379237 CCDC110Q8TBZ0 833 aa11.72□□□□□ -0.53
USP6NL-202ENST00000379237 YIPF2Q9BWQ6 316 aa11.72□□□□□ -0.53
USP6NL-202ENST00000379237 UBAP1Q9NZ09 502 aa11.72□□□□□ -0.53
USP6NL-202ENST00000379237 PEX11AO75192 247 aa11.72□□□□□ -0.53
USP6NL-202ENST00000379237 VAV1P15498 845 aa11.72□□□□□ -0.53
USP6NL-202ENST00000379237 IGBP1P78318 339 aa11.72□□□□□ -0.53
USP6NL-202ENST00000379237 EXOC3L4Q17RC7 722 aa11.72□□□□□ -0.53
USP6NL-202ENST00000379237 CCDC137Q6PK04 289 aaKnown RBP11.72□□□□□ -0.53
USP6NL-202ENST00000379237 CCDC125Q86Z20 511 aa11.72□□□□□ -0.53
USP6NL-202ENST00000379237 DENND2DQ9H6A0 471 aaPredicted RBP11.72□□□□□ -0.53
USP6NL-202ENST00000379237 SMYD3Q9H7B4 428 aa11.72□□□□□ -0.53
USP6NL-202ENST00000379237 SEC63Q9UGP8 760 aaKnown RBP11.72□□□□□ -0.53
USP6NL-202ENST00000379237 SOS2Q07890 1332 aaPredicted RBP11.72□□□□□ -0.53
USP6NL-202ENST00000379237 PLEKHG1Q9ULL1 1385 aa11.72□□□□□ -0.53
USP6NL-202ENST00000379237 HECW2Q9P2P5 1572 aa11.72□□□□□ -0.53
USP6NL-202ENST00000379237 NDC80O14777 642 aa11.72□□□□□ -0.53
USP6NL-202ENST00000379237 PJA2O43164 708 aa11.72□□□□□ -0.53
USP6NL-202ENST00000379237 ATF2P15336 505 aa11.72□□□□□ -0.53
USP6NL-202ENST00000379237 DHX34Q14147 1143 aaKnown RBP11.72□□□□□ -0.53
USP6NL-202ENST00000379237 PDXDC2PQ6P474 469 aa11.72□□□□□ -0.53
USP6NL-202ENST00000379237 MIGA2Q7L4E1 593 aa11.72□□□□□ -0.53
USP6NL-202ENST00000379237 TRIML2Q8N7C3 387 aa11.72□□□□□ -0.53
USP6NL-202ENST00000379237 TRIM55Q9BYV6 548 aa11.72□□□□□ -0.53
USP6NL-202ENST00000379237 ANLNQ9NQW6 1124 aa11.72□□□□□ -0.53
USP6NL-202ENST00000379237 IL1RAPL1Q9NZN1 696 aa11.72□□□□□ -0.53
USP6NL-202ENST00000379237 R3HDM2Q9Y2K5 976 aaKnown RBP11.72□□□□□ -0.53
USP6NL-202ENST00000379237 SUGT1Q9Y2Z0 365 aa11.72□□□□□ -0.53
USP6NL-202ENST00000379237 GFPT2O94808 682 aa11.71□□□□□ -0.53
USP6NL-202ENST00000379237 ADD2P35612 726 aa11.71□□□□□ -0.53
USP6NL-202ENST00000379237 ARL6IP4Q66PJ3 421 aaKnown RBP11.71□□□□□ -0.53
USP6NL-202ENST00000379237 MTDHQ86UE4 582 aaKnown RBP11.71□□□□□ -0.53
USP6NL-202ENST00000379237 FBXL16Q8N461 479 aa11.71□□□□□ -0.53
USP6NL-202ENST00000379237 PTPRN2Q92932 1015 aa11.71□□□□□ -0.53
USP6NL-202ENST00000379237 DNAJC1Q96KC8 554 aaKnown RBP11.71□□□□□ -0.53
USP6NL-202ENST00000379237 MPHOSPH6Q99547 160 aaKnown RBP11.71□□□□□ -0.53
USP6NL-202ENST00000379237 GPR108Q9NPR9 543 aa11.71□□□□□ -0.53
USP6NL-202ENST00000379237 ARHGEF38Q9NXL2 777 aa11.71□□□□□ -0.53
USP6NL-202ENST00000379237 KYNUQ16719 465 aa11.71□□□□□ -0.53
USP6NL-202ENST00000379237 ARHGAP44Q17R89 818 aa11.71□□□□□ -0.53
USP6NL-202ENST00000379237 PARP6Q2NL67 630 aa11.71□□□□□ -0.53
USP6NL-202ENST00000379237 LRRC8BQ6P9F7 803 aa11.71□□□□□ -0.53
USP6NL-202ENST00000379237 ZNF790Q6PG37 636 aa11.71□□□□□ -0.53
USP6NL-202ENST00000379237 ANKRD23Q86SG2 305 aa11.71□□□□□ -0.53
USP6NL-202ENST00000379237 TRIM50Q86XT4 487 aa11.71□□□□□ -0.53
USP6NL-202ENST00000379237 SLC26A7Q8TE54 656 aa11.71□□□□□ -0.53
USP6NL-202ENST00000379237 SNX29Q8TEQ0 813 aa11.71□□□□□ -0.53
USP6NL-202ENST00000379237 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.71□□□□□ -0.53
USP6NL-202ENST00000379237 MAML1Q92585 1016 aa11.71□□□□□ -0.53
USP6NL-202ENST00000379237 GFM2Q969S9 779 aaKnown RBP11.71□□□□□ -0.53
USP6NL-202ENST00000379237 ABHD8Q96I13 439 aa11.71□□□□□ -0.53
USP6NL-202ENST00000379237 SPATA16Q9BXB7 569 aa11.71□□□□□ -0.53
USP6NL-202ENST00000379237 TYW1Q9NV66 732 aaKnown RBP11.71□□□□□ -0.53
USP6NL-202ENST00000379237 PCDHGA4Q9Y5G9 962 aa11.71□□□□□ -0.53
USP6NL-202ENST00000379237 LYNP07948 512 aa11.71□□□□□ -0.54
USP6NL-202ENST00000379237 TMEM259Q4ZIN3 620 aa11.71□□□□□ -0.54
USP6NL-202ENST00000379237 C1QTNF12Q5T7M4 302 aa11.71□□□□□ -0.54
USP6NL-202ENST00000379237 NLRP9Q7RTR0 991 aa11.71□□□□□ -0.54
USP6NL-202ENST00000379237 TLCD1Q96CP7 247 aa11.71□□□□□ -0.54
USP6NL-202ENST00000379237 MAGEB18Q96M61 343 aa11.71□□□□□ -0.54
USP6NL-202ENST00000379237 UIMC1Q96RL1 719 aa11.71□□□□□ -0.54
USP6NL-202ENST00000379237 PFDN4Q9NQP4 134 aa11.71□□□□□ -0.54
USP6NL-202ENST00000379237 ANAPC5Q9UJX4 755 aa11.71□□□□□ -0.54
USP6NL-202ENST00000379237 PRKAB2O43741 272 aa11.7□□□□□ -0.54
USP6NL-202ENST00000379237 PGM3O95394 542 aa11.7□□□□□ -0.54
USP6NL-202ENST00000379237 PCYT1AP49585 367 aa11.7□□□□□ -0.54
USP6NL-202ENST00000379237 ARFIP2P53365 341 aa11.7□□□□□ -0.54
USP6NL-202ENST00000379237 PLCB3Q01970 1234 aa11.7□□□□□ -0.54
USP6NL-202ENST00000379237 DCTN2Q13561 401 aaKnown RBP11.7□□□□□ -0.54
USP6NL-202ENST00000379237 SCARF1Q14162 830 aa11.7□□□□□ -0.54
USP6NL-202ENST00000379237 EARS2Q5JPH6 523 aaKnown RBP11.7□□□□□ -0.54
USP6NL-202ENST00000379237 JDP2Q8WYK2 163 aa11.7□□□□□ -0.54
USP6NL-202ENST00000379237 INPP5DQ92835 1189 aa11.7□□□□□ -0.54
USP6NL-202ENST00000379237 FAM47DPA6NHR8 397 aa11.7□□□□□ -0.54
USP6NL-202ENST00000379237 HNRNPCL1O60812 293 aaKnown RBP11.7□□□□□ -0.54
USP6NL-202ENST00000379237 CCDC166P0CW27 439 aa11.7□□□□□ -0.54
USP6NL-202ENST00000379237 SKIV2L2P42285 1042 aaKnown RBP11.7□□□□□ -0.54
USP6NL-202ENST00000379237 SERPINB8P50452 374 aa11.7□□□□□ -0.54
USP6NL-202ENST00000379237 MDH1BQ5I0G3 518 aa11.7□□□□□ -0.54
USP6NL-202ENST00000379237 TMEM110Q86TL2 294 aa11.7□□□□□ -0.54
USP6NL-202ENST00000379237 CADPS2Q86UW7 1296 aa11.7□□□□□ -0.54
USP6NL-202ENST00000379237 CASP10Q92851 521 aa11.7□□□□□ -0.54
USP6NL-202ENST00000379237 ROPN1BQ9BZX4 212 aaPredicted RBP11.7□□□□□ -0.54
USP6NL-202ENST00000379237 ASCC2Q9H1I8 757 aaPredicted RBP11.7□□□□□ -0.54
USP6NL-202ENST00000379237 ROPN1Q9HAT0 212 aaPredicted RBP11.7□□□□□ -0.54
USP6NL-202ENST00000379237 STX8Q9UNK0 236 aa11.7□□□□□ -0.54
USP6NL-202ENST00000379237 H0YGN5 161 aa11.7□□□□□ -0.54
USP6NL-202ENST00000379237 PRPF3O43395 683 aaKnown RBP11.7□□□□□ -0.54
USP6NL-202ENST00000379237 PSMG1O95456 288 aa11.7□□□□□ -0.54
USP6NL-202ENST00000379237 GNA14O95837 355 aa11.7□□□□□ -0.54
USP6NL-202ENST00000379237 AFPP02771 609 aaKnown RBP11.7□□□□□ -0.54
USP6NL-202ENST00000379237 XRCC5P13010 732 aaKnown RBP11.7□□□□□ -0.54
USP6NL-202ENST00000379237 ALOX15P16050 662 aaPredicted RBP11.7□□□□□ -0.54
USP6NL-202ENST00000379237 EPHB1P54762 984 aa11.7□□□□□ -0.54
USP6NL-202ENST00000379237 KHDC1Q4VXA5 237 aaKnown RBP11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms