RNA–Protein interactions for RNA: ENST00000378821.3

TMEM88B-201, Transcript of transmembrane protein 88B, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TMEM88B, Length 492 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88B-201ENST00000378821 SLFN12Q8IYM2 578 aa21.18■□□□□ 0.98
TMEM88B-201ENST00000378821 COLGALT1Q8NBJ5 622 aa21.18■□□□□ 0.98
TMEM88B-201ENST00000378821 ZNF668Q96K58 619 aaPredicted RBP21.18■□□□□ 0.98
TMEM88B-201ENST00000378821 SH2D3AQ9BRG2 576 aa21.18■□□□□ 0.98
TMEM88B-201ENST00000378821 EPHX3Q9H6B9 360 aa21.18■□□□□ 0.98
TMEM88B-201ENST00000378821 DHX33Q9H6R0 707 aaKnown RBP21.18■□□□□ 0.98
TMEM88B-201ENST00000378821 DACT1Q9NYF0 836 aa21.18■□□□□ 0.98
TMEM88B-201ENST00000378821 SUCLA2Q9P2R7 463 aaPredicted RBP21.18■□□□□ 0.98
TMEM88B-201ENST00000378821 HCSTQ9UBK5 93 aa21.18■□□□□ 0.98
TMEM88B-201ENST00000378821 FAM50BQ9Y247 325 aa21.18■□□□□ 0.98
TMEM88B-201ENST00000378821 LZTS1Q9Y250 596 aa21.18■□□□□ 0.98
TMEM88B-201ENST00000378821 A0A087WZ62 844 aa21.17■□□□□ 0.98
TMEM88B-201ENST00000378821 PI4K2BG5E9Z4 385 aa21.17■□□□□ 0.98
TMEM88B-201ENST00000378821 TBX10O75333 385 aa21.17■□□□□ 0.98
TMEM88B-201ENST00000378821 ATF7P17544 494 aaPredicted RBP21.17■□□□□ 0.98
TMEM88B-201ENST00000378821 LAG3P18627 525 aa21.17■□□□□ 0.98
TMEM88B-201ENST00000378821 PLCB3Q01970 1234 aa21.17■□□□□ 0.98
TMEM88B-201ENST00000378821 PLA2G4FQ68DD2 849 aa21.17■□□□□ 0.98
TMEM88B-201ENST00000378821 PDE12Q6L8Q7 609 aaKnown RBP21.17■□□□□ 0.98
TMEM88B-201ENST00000378821 ADGRD2Q7Z7M1 963 aa21.17■□□□□ 0.98
TMEM88B-201ENST00000378821 EFHBQ8N7U6 833 aa21.17■□□□□ 0.98
TMEM88B-201ENST00000378821 PPP2R3CQ969Q6 453 aa21.17■□□□□ 0.98
TMEM88B-201ENST00000378821 MSLNLQ96KJ4 702 aa21.17■□□□□ 0.98
TMEM88B-201ENST00000378821 FDXACB1Q9BRP7 624 aaPredicted RBP21.17■□□□□ 0.98
TMEM88B-201ENST00000378821 INO80BQ9C086 356 aaPredicted RBP21.17■□□□□ 0.98
TMEM88B-201ENST00000378821 IFT122Q9HBG6 1241 aa21.17■□□□□ 0.98
TMEM88B-201ENST00000378821 C19orf67A6NJJ6 358 aa21.16■□□□□ 0.98
TMEM88B-201ENST00000378821 FSCN2O14926 492 aa21.16■□□□□ 0.98
TMEM88B-201ENST00000378821 FGF18O76093 207 aa21.16■□□□□ 0.98
TMEM88B-201ENST00000378821 FGFR4P22455 802 aa21.16■□□□□ 0.98
TMEM88B-201ENST00000378821 NPEPPSP55786 919 aa21.16■□□□□ 0.98
TMEM88B-201ENST00000378821 SMAD2Q15796 467 aaKnown RBP21.16■□□□□ 0.98
TMEM88B-201ENST00000378821 CLLU1OSQ5K130 101 aa21.16■□□□□ 0.98
TMEM88B-201ENST00000378821 GJD3Q8N144 294 aa21.16■□□□□ 0.98
TMEM88B-201ENST00000378821 ZNF579Q8NAF0 562 aaKnown RBP21.16■□□□□ 0.98
TMEM88B-201ENST00000378821 FBXO18Q8NFZ0 1043 aa21.16■□□□□ 0.98
TMEM88B-201ENST00000378821 RSPH1Q8WYR4 309 aa21.16■□□□□ 0.98
TMEM88B-201ENST00000378821 ARID2Q68CP9 1835 aa21.15■□□□□ 0.98
TMEM88B-201ENST00000378821 LINC01565O15544 149 aa21.15■□□□□ 0.98
TMEM88B-201ENST00000378821 CSDE1O75534 798 aaKnown RBP21.15■□□□□ 0.98
TMEM88B-201ENST00000378821 BAG4O95429 457 aaKnown RBP21.15■□□□□ 0.98
TMEM88B-201ENST00000378821 EYA4O95677 639 aa21.15■□□□□ 0.98
TMEM88B-201ENST00000378821 RFC5P40937 340 aa21.15■□□□□ 0.98
TMEM88B-201ENST00000378821 ZP2Q05996 745 aa21.15■□□□□ 0.98
TMEM88B-201ENST00000378821 SAFBQ15424 915 aaKnown RBP eCLIP21.15■□□□□ 0.98
TMEM88B-201ENST00000378821 RHPN2Q8IUC4 686 aa21.15■□□□□ 0.98
TMEM88B-201ENST00000378821 LRRC43Q8N309 656 aa21.15■□□□□ 0.98
TMEM88B-201ENST00000378821 SCLT1Q96NL6 688 aa21.15■□□□□ 0.98
TMEM88B-201ENST00000378821 HSD17B14Q9BPX1 270 aa21.15■□□□□ 0.98
TMEM88B-201ENST00000378821 LXNQ9BS40 222 aa21.15■□□□□ 0.98
TMEM88B-201ENST00000378821 TLR9Q9NR96 1032 aa21.15■□□□□ 0.98
TMEM88B-201ENST00000378821 CLEC1BQ9P126 229 aa21.15■□□□□ 0.98
TMEM88B-201ENST00000378821 WNT7AO00755 349 aa21.14■□□□□ 0.97
TMEM88B-201ENST00000378821 MBTPS2O43462 519 aa21.14■□□□□ 0.97
TMEM88B-201ENST00000378821 GAS2O43903 313 aaKnown RBP21.14■□□□□ 0.97
TMEM88B-201ENST00000378821 ZNF623O75123 536 aa21.14■□□□□ 0.97
TMEM88B-201ENST00000378821 SLITRK3O94933 977 aa21.14■□□□□ 0.97
TMEM88B-201ENST00000378821 LYPLA2O95372 231 aa21.14■□□□□ 0.97
TMEM88B-201ENST00000378821 IBSPP21815 317 aaPredicted RBP21.14■□□□□ 0.97
TMEM88B-201ENST00000378821 SFPQP23246 707 aaKnown RBP eCLIP21.14■□□□□ 0.97
TMEM88B-201ENST00000378821 GJB2P29033 226 aa21.14■□□□□ 0.97
TMEM88B-201ENST00000378821 YWHABP31946 246 aaKnown RBP21.14■□□□□ 0.97
TMEM88B-201ENST00000378821 PHKA2P46019 1235 aa21.14■□□□□ 0.97
TMEM88B-201ENST00000378821 SPOUT1Q5T280 376 aaKnown RBP21.14■□□□□ 0.97
TMEM88B-201ENST00000378821 KSR1Q8IVT5 923 aa21.14■□□□□ 0.97
TMEM88B-201ENST00000378821 ADHFE1Q8IWW8 467 aa21.14■□□□□ 0.97
TMEM88B-201ENST00000378821 SLC7A3Q8WY07 619 aa21.14■□□□□ 0.97
TMEM88B-201ENST00000378821 CEP170P1Q96L14 293 aa21.14■□□□□ 0.97
TMEM88B-201ENST00000378821 MTMR9Q96QG7 549 aa21.14■□□□□ 0.97
TMEM88B-201ENST00000378821 ZSWIM4Q9H7M6 989 aa21.14■□□□□ 0.97
TMEM88B-201ENST00000378821 RGL1Q9NZL6 768 aa21.14■□□□□ 0.97
TMEM88B-201ENST00000378821 GLP2RO95838 553 aa21.13■□□□□ 0.97
TMEM88B-201ENST00000378821 SKIP12755 728 aa21.13■□□□□ 0.97
TMEM88B-201ENST00000378821 COL9A1P20849 921 aa21.13■□□□□ 0.97
TMEM88B-201ENST00000378821 ERVFC1P60507 584 aa21.13■□□□□ 0.97
TMEM88B-201ENST00000378821 COASYQ13057 564 aa21.13■□□□□ 0.97
TMEM88B-201ENST00000378821 SMAD4Q13485 552 aaKnown RBP21.13■□□□□ 0.97
TMEM88B-201ENST00000378821 KCNC3Q14003 757 aa21.13■□□□□ 0.97
TMEM88B-201ENST00000378821 KCNT2Q6UVM3 1135 aa21.13■□□□□ 0.97
TMEM88B-201ENST00000378821 EP400NLQ6ZTU2 488 aa21.13■□□□□ 0.97
TMEM88B-201ENST00000378821 OTUD6AQ7L8S5 288 aa21.13■□□□□ 0.97
TMEM88B-201ENST00000378821 THNSL1Q8IYQ7 743 aa21.13■□□□□ 0.97
TMEM88B-201ENST00000378821 MRPS27Q92552 414 aaKnown RBP21.13■□□□□ 0.97
TMEM88B-201ENST00000378821 DYDC2Q96IM9 177 aa21.13■□□□□ 0.97
TMEM88B-201ENST00000378821 CDCA3Q99618 268 aaPredicted RBP21.13■□□□□ 0.97
TMEM88B-201ENST00000378821 IGFLR1Q9H665 355 aa21.13■□□□□ 0.97
TMEM88B-201ENST00000378821 C11orf16Q9NQ32 467 aa21.13■□□□□ 0.97
TMEM88B-201ENST00000378821 CD207Q9UJ71 328 aa21.13■□□□□ 0.97
TMEM88B-201ENST00000378821 PCDHA12Q9UN75 941 aa21.13■□□□□ 0.97
TMEM88B-201ENST00000378821 COL4A3BPQ9Y5P4 624 aa21.13■□□□□ 0.97
TMEM88B-201ENST00000378821 FSD2A1L4K1 749 aa21.12■□□□□ 0.97
TMEM88B-201ENST00000378821 GPR37L1O60883 481 aa21.12■□□□□ 0.97
TMEM88B-201ENST00000378821 NRIP1P48552 1158 aa21.12■□□□□ 0.97
TMEM88B-201ENST00000378821 CUL4AQ13619 759 aa21.12■□□□□ 0.97
TMEM88B-201ENST00000378821 NCAPH2Q6IBW4 605 aa21.12■□□□□ 0.97
TMEM88B-201ENST00000378821 ABI1Q8IZP0 508 aa21.12■□□□□ 0.97
TMEM88B-201ENST00000378821 PRPF31Q8WWY3 499 aaKnown RBP21.12■□□□□ 0.97
TMEM88B-201ENST00000378821 FOXP1Q9H334 677 aaPredicted RBP21.12■□□□□ 0.97
TMEM88B-201ENST00000378821 SMC3Q9UQE7 1217 aa21.12■□□□□ 0.97
TMEM88B-201ENST00000378821 KIF3AQ9Y496 699 aa21.12■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms