RNA–Protein interactions for RNA: ENST00000378676.1

SHROOM1-202, Transcript of shroom family member 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHROOM1, Length 2,352 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-202ENST00000378676 SYCE1Q8N0S2 351 aa21.2■□□□□ 0.98
SHROOM1-202ENST00000378676 RDH13Q8NBN7 331 aa21.2■□□□□ 0.98
SHROOM1-202ENST00000378676 SLC35G2Q8TBE7 412 aa21.2■□□□□ 0.98
SHROOM1-202ENST00000378676 RNPC3Q96LT9 517 aaKnown RBP21.2■□□□□ 0.98
SHROOM1-202ENST00000378676 STRA6Q9BX79 667 aa21.2■□□□□ 0.98
SHROOM1-202ENST00000378676 TEKT3Q9BXF9 490 aa21.2■□□□□ 0.98
SHROOM1-202ENST00000378676 GLIS2Q9BZE0 524 aaPredicted RBP21.2■□□□□ 0.98
SHROOM1-202ENST00000378676 WDR11Q9BZH6 1224 aa21.2■□□□□ 0.98
SHROOM1-202ENST00000378676 PKD2L1Q9P0L9 805 aa21.2■□□□□ 0.98
SHROOM1-202ENST00000378676 APEX2Q9UBZ4 518 aa21.2■□□□□ 0.98
SHROOM1-202ENST00000378676 TISP43B9A030 160 aa21.19■□□□□ 0.98
SHROOM1-202ENST00000378676 EN1Q05925 392 aaPredicted RBP21.19■□□□□ 0.98
SHROOM1-202ENST00000378676 TRAF1Q13077 416 aa21.19■□□□□ 0.98
SHROOM1-202ENST00000378676 DCAF12L1Q5VU92 463 aa21.19■□□□□ 0.98
SHROOM1-202ENST00000378676 KDM7AQ6ZMT4 941 aa21.19■□□□□ 0.98
SHROOM1-202ENST00000378676 RFFLQ8WZ73 363 aa21.19■□□□□ 0.98
SHROOM1-202ENST00000378676 AMACRQ9UHK6 382 aa21.19■□□□□ 0.98
SHROOM1-202ENST00000378676 PPP1R9AQ9ULJ8 1098 aa21.19■□□□□ 0.98
SHROOM1-202ENST00000378676 MRPL11Q9Y3B7 192 aaKnown RBP21.19■□□□□ 0.98
SHROOM1-202ENST00000378676 TMEM253P0C7T8 217 aa21.19■□□□□ 0.98
SHROOM1-202ENST00000378676 MUTP22033 750 aa21.19■□□□□ 0.98
SHROOM1-202ENST00000378676 GUCY2CP25092 1073 aa21.19■□□□□ 0.98
SHROOM1-202ENST00000378676 HSD17B3P37058 310 aa21.19■□□□□ 0.98
SHROOM1-202ENST00000378676 BFSP1Q12934 665 aa21.19■□□□□ 0.98
SHROOM1-202ENST00000378676 CUL1Q13616 776 aa21.19■□□□□ 0.98
SHROOM1-202ENST00000378676 PPP2R5AQ15172 486 aa21.19■□□□□ 0.98
SHROOM1-202ENST00000378676 PHLDB3Q6NSJ2 640 aa21.19■□□□□ 0.98
SHROOM1-202ENST00000378676 MAATS1Q7Z4T9 603 aa21.19■□□□□ 0.98
SHROOM1-202ENST00000378676 PLCD3Q8N3E9 789 aa21.19■□□□□ 0.98
SHROOM1-202ENST00000378676 VCPKMTQ9H867 229 aa21.19■□□□□ 0.98
SHROOM1-202ENST00000378676 TMOD2Q9NZR1 351 aa21.19■□□□□ 0.98
SHROOM1-202ENST00000378676 ARHGEF35A5YM69 484 aa21.18■□□□□ 0.98
SHROOM1-202ENST00000378676 CCDC188H7C350 402 aa21.18■□□□□ 0.98
SHROOM1-202ENST00000378676 IPO5O00410 1097 aaKnown RBP21.18■□□□□ 0.98
SHROOM1-202ENST00000378676 DDX3YO15523 660 aaKnown RBP21.18■□□□□ 0.98
SHROOM1-202ENST00000378676 DLG4P78352 724 aa21.18■□□□□ 0.98
SHROOM1-202ENST00000378676 PPATQ06203 517 aa21.18■□□□□ 0.98
SHROOM1-202ENST00000378676 STXBP4Q6ZWJ1 553 aa21.18■□□□□ 0.98
SHROOM1-202ENST00000378676 MAEAQ7L5Y9 396 aa21.18■□□□□ 0.98
SHROOM1-202ENST00000378676 LDHDQ86WU2 507 aa21.18■□□□□ 0.98
SHROOM1-202ENST00000378676 CHURC1Q8WUH1 139 aa21.18■□□□□ 0.98
SHROOM1-202ENST00000378676 HOOK2Q96ED9 719 aa21.18■□□□□ 0.98
SHROOM1-202ENST00000378676 CELF4Q9BZC1 486 aaKnown RBP21.18■□□□□ 0.98
SHROOM1-202ENST00000378676 EHMT1Q9H9B1 1298 aa21.18■□□□□ 0.98
SHROOM1-202ENST00000378676 ZNF70Q9UC06 446 aaPredicted RBP21.18■□□□□ 0.98
SHROOM1-202ENST00000378676 AMFRQ9UKV5 643 aa21.18■□□□□ 0.98
SHROOM1-202ENST00000378676 TTI1O43156 1089 aa21.18■□□□□ 0.98
SHROOM1-202ENST00000378676 EXOC3O60645 756 aa21.18■□□□□ 0.98
SHROOM1-202ENST00000378676 LRRN2O75325 713 aa21.18■□□□□ 0.98
SHROOM1-202ENST00000378676 FLT3P36888 993 aa21.18■□□□□ 0.98
SHROOM1-202ENST00000378676 SETQ01105 290 aaPredicted RBP21.18■□□□□ 0.98
SHROOM1-202ENST00000378676 CEP85LQ5SZL2 805 aa21.18■□□□□ 0.98
SHROOM1-202ENST00000378676 EIF1ADQ8N9N8 165 aaKnown RBP21.18■□□□□ 0.98
SHROOM1-202ENST00000378676 OR2W6PQ8NHA6 318 aa21.18■□□□□ 0.98
SHROOM1-202ENST00000378676 LMO3Q8TAP4 145 aa21.18■□□□□ 0.98
SHROOM1-202ENST00000378676 ATP6V1G3Q96LB4 118 aa21.18■□□□□ 0.98
SHROOM1-202ENST00000378676 KCND2Q9NZV8 630 aa21.18■□□□□ 0.98
SHROOM1-202ENST00000378676 NR2E1Q9Y466 385 aa21.18■□□□□ 0.98
SHROOM1-202ENST00000378676 K7ENM7 598 aa21.17■□□□□ 0.98
SHROOM1-202ENST00000378676 ITGB5P18084 799 aa21.17■□□□□ 0.98
SHROOM1-202ENST00000378676 GRIPAP1Q4V328 841 aa21.17■□□□□ 0.98
SHROOM1-202ENST00000378676 SYCP3Q8IZU3 236 aa21.17■□□□□ 0.98
SHROOM1-202ENST00000378676 FAM151AQ8WW52 585 aa21.17■□□□□ 0.98
SHROOM1-202ENST00000378676 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP21.17■□□□□ 0.98
SHROOM1-202ENST00000378676 THAP2Q9H0W7 228 aa21.17■□□□□ 0.98
SHROOM1-202ENST00000378676 COL20A1Q9P218 1284 aa21.17■□□□□ 0.98
SHROOM1-202ENST00000378676 COL4A5P29400 1685 aa21.17■□□□□ 0.98
SHROOM1-202ENST00000378676 DAPK3O43293 454 aa21.17■□□□□ 0.98
SHROOM1-202ENST00000378676 NR1D1P20393 614 aa21.17■□□□□ 0.98
SHROOM1-202ENST00000378676 NAA35Q5VZE5 725 aa21.17■□□□□ 0.98
SHROOM1-202ENST00000378676 TEX2Q8IWB9 1127 aa21.17■□□□□ 0.98
SHROOM1-202ENST00000378676 IL31RAQ8NI17 732 aa21.17■□□□□ 0.98
SHROOM1-202ENST00000378676 SLC20A1Q8WUM9 679 aa21.17■□□□□ 0.98
SHROOM1-202ENST00000378676 CTNNBL1Q8WYA6 563 aaPredicted RBP21.17■□□□□ 0.98
SHROOM1-202ENST00000378676 CNKSR1Q969H4 720 aa21.17■□□□□ 0.98
SHROOM1-202ENST00000378676 MXRA8Q9BRK3 442 aa21.17■□□□□ 0.98
SHROOM1-202ENST00000378676 PCIF1Q9H4Z3 704 aa21.17■□□□□ 0.98
SHROOM1-202ENST00000378676 SEPT11Q9NVA2 429 aaKnown RBP21.17■□□□□ 0.98
SHROOM1-202ENST00000378676 COG5Q9UP83 839 aa21.17■□□□□ 0.98
SHROOM1-202ENST00000378676 H0YGN5 161 aa21.16■□□□□ 0.98
SHROOM1-202ENST00000378676 GUCY1A3Q02108 690 aa21.16■□□□□ 0.98
SHROOM1-202ENST00000378676 SF3B2Q13435 895 aaKnown RBP21.16■□□□□ 0.98
SHROOM1-202ENST00000378676 SLC9A9Q8IVB4 645 aa21.16■□□□□ 0.98
SHROOM1-202ENST00000378676 SLITRK6Q9H5Y7 841 aa21.16■□□□□ 0.98
SHROOM1-202ENST00000378676 NFS1Q9Y697 457 aa21.16■□□□□ 0.98
SHROOM1-202ENST00000378676 FER1L6Q2WGJ9 1857 aa21.16■□□□□ 0.98
SHROOM1-202ENST00000378676 WDR81Q562E7 1941 aa21.16■□□□□ 0.98
SHROOM1-202ENST00000378676 FOXN3O00409 490 aaPredicted RBP21.16■□□□□ 0.98
SHROOM1-202ENST00000378676 FGGP02679 453 aa21.16■□□□□ 0.98
SHROOM1-202ENST00000378676 MAGEA9P43362 315 aa21.16■□□□□ 0.98
SHROOM1-202ENST00000378676 KIF22Q14807 665 aa21.16■□□□□ 0.98
SHROOM1-202ENST00000378676 PADI6Q6TGC4 694 aa21.16■□□□□ 0.98
SHROOM1-202ENST00000378676 ARHGEF19Q8IW93 802 aa21.16■□□□□ 0.98
SHROOM1-202ENST00000378676 AGBL1Q96MI9 1066 aa21.16■□□□□ 0.98
SHROOM1-202ENST00000378676 TMBIM4Q9HC24 238 aa21.16■□□□□ 0.98
SHROOM1-202ENST00000378676 SAMM50Q9Y512 469 aa21.16■□□□□ 0.98
SHROOM1-202ENST00000378676 EMSYQ7Z589 1322 aa21.15■□□□□ 0.98
SHROOM1-202ENST00000378676 TNFAIP3P21580 790 aa21.15■□□□□ 0.98
SHROOM1-202ENST00000378676 POU5F1Q01860 360 aaKnown RBP21.15■□□□□ 0.98
SHROOM1-202ENST00000378676 MIGA2Q7L4E1 593 aa21.15■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms