RNA–Protein interactions for RNA: ENST00000378572.7

PRPF18-202, Transcript of pre-mRNA processing factor 18, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF18, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF18-202ENST00000378572 BTBD18B2RXH4 712 aa15.39■□□□□ 0.05
PRPF18-202ENST00000378572 C9IYK1 514 aa15.39■□□□□ 0.05
PRPF18-202ENST00000378572 MSH4O15457 936 aa15.39■□□□□ 0.05
PRPF18-202ENST00000378572 FGF18O76093 207 aa15.39■□□□□ 0.05
PRPF18-202ENST00000378572 LAG3P18627 525 aa15.39■□□□□ 0.05
PRPF18-202ENST00000378572 PTMSP20962 102 aa15.39■□□□□ 0.05
PRPF18-202ENST00000378572 CIITAP33076 1130 aa15.39■□□□□ 0.05
PRPF18-202ENST00000378572 CA8P35219 290 aa15.39■□□□□ 0.05
PRPF18-202ENST00000378572 TBC1D8BQ0IIM8 1120 aa15.39■□□□□ 0.05
PRPF18-202ENST00000378572 GNL2Q13823 731 aaKnown RBP15.39■□□□□ 0.05
PRPF18-202ENST00000378572 PLPP4Q5VZY2 271 aa15.39■□□□□ 0.05
PRPF18-202ENST00000378572 NOSTRINQ8IVI9 506 aa15.39■□□□□ 0.05
PRPF18-202ENST00000378572 NLRP7Q8WX94 980 aa15.39■□□□□ 0.05
PRPF18-202ENST00000378572 ZNF396Q96N95 335 aaPredicted RBP15.39■□□□□ 0.05
PRPF18-202ENST00000378572 ENTPD7Q9NQZ7 604 aa15.39■□□□□ 0.05
PRPF18-202ENST00000378572 MUTYHQ9UIF7 546 aa15.39■□□□□ 0.05
PRPF18-202ENST00000378572 FNDC1Q4ZHG4 1894 aaPredicted RBP15.38■□□□□ 0.05
PRPF18-202ENST00000378572 PER2O15055 1255 aa15.38■□□□□ 0.05
PRPF18-202ENST00000378572 HOXA2O43364 376 aa15.38■□□□□ 0.05
PRPF18-202ENST00000378572 GPR32O75388 356 aa15.38■□□□□ 0.05
PRPF18-202ENST00000378572 JAK3P52333 1124 aa15.38■□□□□ 0.05
PRPF18-202ENST00000378572 UBE3AQ05086 875 aa15.38■□□□□ 0.05
PRPF18-202ENST00000378572 DNM1Q05193 864 aaKnown RBP15.38■□□□□ 0.05
PRPF18-202ENST00000378572 FAM43BQ6ZT52 329 aaPredicted RBP15.38■□□□□ 0.05
PRPF18-202ENST00000378572 MIER3Q7Z3K6 550 aa15.38■□□□□ 0.05
PRPF18-202ENST00000378572 BLIDQ8IZY5 108 aa15.38■□□□□ 0.05
PRPF18-202ENST00000378572 TMEM87AQ8NBN3 555 aa15.38■□□□□ 0.05
PRPF18-202ENST00000378572 TBCKQ8TEA7 893 aa15.38■□□□□ 0.05
PRPF18-202ENST00000378572 TNFRSF25Q93038 417 aa15.38■□□□□ 0.05
PRPF18-202ENST00000378572 GJA10Q969M2 543 aa15.38■□□□□ 0.05
PRPF18-202ENST00000378572 LENG9Q96B70 501 aa15.38■□□□□ 0.05
PRPF18-202ENST00000378572 UNC45AQ9H3U1 944 aa15.38■□□□□ 0.05
PRPF18-202ENST00000378572 C19orf67A6NJJ6 358 aa15.37■□□□□ 0.05
PRPF18-202ENST00000378572 M0R2N6 131 aa15.37■□□□□ 0.05
PRPF18-202ENST00000378572 SRGAP2BP0DMP2 458 aa15.37■□□□□ 0.05
PRPF18-202ENST00000378572 SFNP31947 248 aa15.37■□□□□ 0.05
PRPF18-202ENST00000378572 UGCGQ16739 394 aa15.37■□□□□ 0.05
PRPF18-202ENST00000378572 MTERF2Q49AM1 385 aa15.37■□□□□ 0.05
PRPF18-202ENST00000378572 FAM173BQ6P4H8 233 aa15.37■□□□□ 0.05
PRPF18-202ENST00000378572 LRRC43Q8N309 656 aa15.37■□□□□ 0.05
PRPF18-202ENST00000378572 SCAND2PQ9GZW5 306 aaPredicted RBP15.37■□□□□ 0.05
PRPF18-202ENST00000378572 TMEM117Q9H0C3 514 aa15.37■□□□□ 0.05
PRPF18-202ENST00000378572 PUF60Q9UHX1 559 aaKnown RBP15.37■□□□□ 0.05
PRPF18-202ENST00000378572 CFAP45Q9UL16 551 aa15.37■□□□□ 0.05
PRPF18-202ENST00000378572 FGFR4P22455 802 aa15.37■□□□□ 0.05
PRPF18-202ENST00000378572 USP11P51784 963 aa15.37■□□□□ 0.05
PRPF18-202ENST00000378572 NR5A1Q13285 461 aa15.37■□□□□ 0.05
PRPF18-202ENST00000378572 RNF135Q8IUD6 432 aa15.37■□□□□ 0.05
PRPF18-202ENST00000378572 OXER1Q8TDS5 423 aa15.37■□□□□ 0.05
PRPF18-202ENST00000378572 ZNF558Q96NG5 402 aa15.37■□□□□ 0.05
PRPF18-202ENST00000378572 RIT2Q99578 217 aa15.37■□□□□ 0.05
PRPF18-202ENST00000378572 ELAC1Q9H777 363 aaKnown RBP15.37■□□□□ 0.05
PRPF18-202ENST00000378572 CLEC1BQ9P126 229 aa15.37■□□□□ 0.05
PRPF18-202ENST00000378572 ZNF862O60290 1169 aa15.36■□□□□ 0.05
PRPF18-202ENST00000378572 TDP2O95551 362 aa15.36■□□□□ 0.05
PRPF18-202ENST00000378572 EIF4BP23588 611 aaKnown RBP15.36■□□□□ 0.05
PRPF18-202ENST00000378572 PBX3P40426 434 aa15.36■□□□□ 0.05
PRPF18-202ENST00000378572 FOXD4L6Q3SYB3 417 aaPredicted RBP15.36■□□□□ 0.05
PRPF18-202ENST00000378572 RILPL1Q5EBL4 403 aa15.36■□□□□ 0.05
PRPF18-202ENST00000378572 LLGL2Q6P1M3 1020 aa15.36■□□□□ 0.05
PRPF18-202ENST00000378572 FOXD4L3Q6VB84 417 aaPredicted RBP15.36■□□□□ 0.05
PRPF18-202ENST00000378572 SLC5A5Q92911 643 aa15.36■□□□□ 0.05
PRPF18-202ENST00000378572 MSLNLQ96KJ4 702 aa15.36■□□□□ 0.05
PRPF18-202ENST00000378572 TCF25Q9BQ70 676 aa15.36■□□□□ 0.05
PRPF18-202ENST00000378572 USP15Q9Y4E8 981 aaPredicted RBP15.36■□□□□ 0.05
PRPF18-202ENST00000378572 ARIH1Q9Y4X5 557 aaPredicted RBP15.36■□□□□ 0.05
PRPF18-202ENST00000378572 FSD2A1L4K1 749 aa15.35■□□□□ 0.05
PRPF18-202ENST00000378572 GLP2RO95838 553 aa15.35■□□□□ 0.05
PRPF18-202ENST00000378572 GPC3P51654 580 aa15.35■□□□□ 0.05
PRPF18-202ENST00000378572 RBM10P98175 930 aaKnown RBP15.35■□□□□ 0.05
PRPF18-202ENST00000378572 DSC3Q14574 896 aa15.35■□□□□ 0.05
PRPF18-202ENST00000378572 SMRP1Q8NCR6 262 aa15.35■□□□□ 0.05
PRPF18-202ENST00000378572 CHAMP1Q96JM3 812 aa15.35■□□□□ 0.05
PRPF18-202ENST00000378572 ADAMTS10Q9H324 1103 aa15.35■□□□□ 0.05
PRPF18-202ENST00000378572 PPM1AP35813 382 aa15.34■□□□□ 0.05
PRPF18-202ENST00000378572 TRAPPC10P48553 1259 aa15.34■□□□□ 0.05
PRPF18-202ENST00000378572 DNM2P50570 870 aa15.34■□□□□ 0.05
PRPF18-202ENST00000378572 ERVFC1P60507 584 aa15.34■□□□□ 0.05
PRPF18-202ENST00000378572 KRT17Q04695 432 aa15.34■□□□□ 0.05
PRPF18-202ENST00000378572 COASYQ13057 564 aa15.34■□□□□ 0.05
PRPF18-202ENST00000378572 PDE12Q6L8Q7 609 aaKnown RBP15.34■□□□□ 0.05
PRPF18-202ENST00000378572 ECHDC2Q86YB7 292 aa15.34■□□□□ 0.05
PRPF18-202ENST00000378572 ZNF710Q8N1W2 664 aa15.34■□□□□ 0.05
PRPF18-202ENST00000378572 MRPS27Q92552 414 aaKnown RBP15.34■□□□□ 0.05
PRPF18-202ENST00000378572 RPGRIP1Q96KN7 1286 aa15.34■□□□□ 0.05
PRPF18-202ENST00000378572 USP28Q96RU2 1077 aa15.34■□□□□ 0.05
PRPF18-202ENST00000378572 CDCA3Q99618 268 aaPredicted RBP15.34■□□□□ 0.05
PRPF18-202ENST00000378572 SH2D3AQ9BRG2 576 aa15.34■□□□□ 0.05
PRPF18-202ENST00000378572 APOL5Q9BWW9 433 aa15.34■□□□□ 0.05
PRPF18-202ENST00000378572 GCOM2Q9BZD3 368 aaPredicted RBP15.34■□□□□ 0.05
PRPF18-202ENST00000378572 CWH43Q9H720 699 aa15.34■□□□□ 0.05
PRPF18-202ENST00000378572 WDR81Q562E7 1941 aa15.34■□□□□ 0.05
PRPF18-202ENST00000378572 TMEM150BA6NC51 233 aa15.34■□□□□ 0.05
PRPF18-202ENST00000378572 CSDE1O75534 798 aaKnown RBP15.34■□□□□ 0.05
PRPF18-202ENST00000378572 EYA4O95677 639 aa15.34■□□□□ 0.05
PRPF18-202ENST00000378572 DARSP14868 501 aaKnown RBP15.34■□□□□ 0.05
PRPF18-202ENST00000378572 NCLP19338 710 aaKnown RBP15.34■□□□□ 0.05
PRPF18-202ENST00000378572 TECP42680 631 aa15.34■□□□□ 0.05
PRPF18-202ENST00000378572 NASPP49321 788 aaPredicted RBP15.34■□□□□ 0.05
PRPF18-202ENST00000378572 FAM189BP81408 668 aa15.34■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms