RNA–Protein interactions for RNA: ENST00000378308.6

USP9X-202, Transcript of ubiquitin specific peptidase 9 X-linked, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP9X, Length 8,371 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP9X-202ENST00000378308 TMEM106CQ9BVX2 250 aa14.19□□□□□ -0.14
USP9X-202ENST00000378308 RNF103-CHMP3A0A140T963 221 aa14.19□□□□□ -0.14
USP9X-202ENST00000378308 MOCS2O96007 188 aaPredicted RBP14.19□□□□□ -0.14
USP9X-202ENST00000378308 LOC102724428A0A0B4J2F2 783 aa14.18□□□□□ -0.14
USP9X-202ENST00000378308 SIK1P57059 783 aa14.18□□□□□ -0.14
USP9X-202ENST00000378308 NCALDP61601 193 aa14.18□□□□□ -0.14
USP9X-202ENST00000378308 CCDC142Q17RM4 750 aa14.18□□□□□ -0.14
USP9X-202ENST00000378308 FOPNLQ96NB1 174 aa14.18□□□□□ -0.14
USP9X-202ENST00000378308 YY1AP1Q9H869 796 aa14.18□□□□□ -0.14
USP9X-202ENST00000378308 EML4Q9HC35 981 aaKnown RBP14.18□□□□□ -0.14
USP9X-202ENST00000378308 PHKA1P46020 1223 aa14.18□□□□□ -0.14
USP9X-202ENST00000378308 APBA1Q02410 837 aa14.18□□□□□ -0.14
USP9X-202ENST00000378308 MAPK6Q16659 721 aa14.18□□□□□ -0.14
USP9X-202ENST00000378308 PHKG1Q16816 387 aa14.18□□□□□ -0.14
USP9X-202ENST00000378308 TOGARAM2Q6ZUX3 1019 aa14.18□□□□□ -0.14
USP9X-202ENST00000378308 WDR75Q8IWA0 830 aaKnown RBP14.18□□□□□ -0.14
USP9X-202ENST00000378308 CAPN10Q9HC96 672 aa14.18□□□□□ -0.14
USP9X-202ENST00000378308 BABAM1Q9NWV8 329 aa14.18□□□□□ -0.14
USP9X-202ENST00000378308 DYNLL1P63167 89 aaKnown RBP14.18□□□□□ -0.14
USP9X-202ENST00000378308 ZNF658Q5TYW1 1059 aaPredicted RBP14.18□□□□□ -0.14
USP9X-202ENST00000378308 UBE4BO95155 1302 aa14.18□□□□□ -0.14
USP9X-202ENST00000378308 KPNA7A9QM74 516 aa14.18□□□□□ -0.14
USP9X-202ENST00000378308 C1orf146Q5VVC0 180 aa14.18□□□□□ -0.14
USP9X-202ENST00000378308 LRRC8EQ6NSJ5 796 aa14.18□□□□□ -0.14
USP9X-202ENST00000378308 MRFAP1L1Q96HT8 127 aa14.18□□□□□ -0.14
USP9X-202ENST00000378308 CYP26B1Q9NR63 512 aa14.18□□□□□ -0.14
USP9X-202ENST00000378308 PLCG1P19174 1290 aa14.18□□□□□ -0.14
USP9X-202ENST00000378308 CDC37Q16543 378 aaPredicted RBP14.18□□□□□ -0.14
USP9X-202ENST00000378308 FASTKD1Q53R41 847 aaKnown RBP14.18□□□□□ -0.14
USP9X-202ENST00000378308 PIGSQ96S52 555 aa14.18□□□□□ -0.14
USP9X-202ENST00000378308 ATP6V0A4Q9HBG4 840 aa14.18□□□□□ -0.14
USP9X-202ENST00000378308 ASNSD1Q9NWL6 643 aa14.18□□□□□ -0.14
USP9X-202ENST00000378308 TLR2O60603 784 aa14.18□□□□□ -0.14
USP9X-202ENST00000378308 CMA1P23946 247 aa14.18□□□□□ -0.14
USP9X-202ENST00000378308 ST8SIA6P61647 398 aa14.18□□□□□ -0.14
USP9X-202ENST00000378308 TNFAIP2Q03169 654 aa14.18□□□□□ -0.14
USP9X-202ENST00000378308 KCTD17Q8N5Z5 321 aa14.18□□□□□ -0.14
USP9X-202ENST00000378308 APPL2Q8NEU8 664 aa14.18□□□□□ -0.14
USP9X-202ENST00000378308 DDX50Q9BQ39 737 aaKnown RBP14.18□□□□□ -0.14
USP9X-202ENST00000378308 MAN1C1Q9NR34 630 aa14.18□□□□□ -0.14
USP9X-202ENST00000378308 PCDHA13Q9Y5I0 950 aa14.18□□□□□ -0.14
USP9X-202ENST00000378308 ABCC4O15439 1325 aa14.18□□□□□ -0.14
USP9X-202ENST00000378308 KRT37O76014 449 aa14.18□□□□□ -0.14
USP9X-202ENST00000378308 GCFC2P16383 781 aaKnown RBP14.18□□□□□ -0.14
USP9X-202ENST00000378308 SPARCL1Q14515 664 aa14.18□□□□□ -0.14
USP9X-202ENST00000378308 DDX42Q86XP3 938 aaKnown RBP eCLIP14.18□□□□□ -0.149e-7■□□□□ 10.4
USP9X-202ENST00000378308 PCDHA7Q9UN72 937 aa14.18□□□□□ -0.14
USP9X-202ENST00000378308 PIK3R2O00459 728 aa14.17□□□□□ -0.14
USP9X-202ENST00000378308 NBNO60934 754 aa14.17□□□□□ -0.14
USP9X-202ENST00000378308 LCP1P13796 627 aa14.17□□□□□ -0.14
USP9X-202ENST00000378308 AKT1P31749 480 aa14.17□□□□□ -0.14
USP9X-202ENST00000378308 RAD51Q06609 339 aa14.17□□□□□ -0.14
USP9X-202ENST00000378308 FOXP1Q9H334 677 aaPredicted RBP14.17□□□□□ -0.14
USP9X-202ENST00000378308 NR5A1Q13285 461 aa14.17□□□□□ -0.14
USP9X-202ENST00000378308 ANKRD49Q8WVL7 239 aa14.17□□□□□ -0.14
USP9X-202ENST00000378308 BTBD6Q96KE9 485 aa14.17□□□□□ -0.14
USP9X-202ENST00000378308 TTC7AQ9ULT0 858 aaPredicted RBP14.17□□□□□ -0.14
USP9X-202ENST00000378308 RALAP11233 206 aa14.17□□□□□ -0.14
USP9X-202ENST00000378308 ZNF235Q14590 738 aa14.17□□□□□ -0.14
USP9X-202ENST00000378308 FAM196AQ6ZSG2 479 aa14.17□□□□□ -0.14
USP9X-202ENST00000378308 ZMYM4Q5VZL5 1548 aa14.17□□□□□ -0.14
USP9X-202ENST00000378308 HDAC4P56524 1084 aa14.17□□□□□ -0.14
USP9X-202ENST00000378308 C6orf118Q5T5N4 469 aa14.17□□□□□ -0.14
USP9X-202ENST00000378308 KRT39Q6A163 491 aa14.17□□□□□ -0.14
USP9X-202ENST00000378308 SDE2Q6IQ49 451 aa14.17□□□□□ -0.14
USP9X-202ENST00000378308 TMEM270Q6UE05 265 aa14.17□□□□□ -0.14
USP9X-202ENST00000378308 BCL2L12Q9HB09 334 aa14.17□□□□□ -0.14
USP9X-202ENST00000378308 MRPL40Q9NQ50 206 aaKnown RBP14.17□□□□□ -0.14
USP9X-202ENST00000378308 KRT14P02533 472 aa14.17□□□□□ -0.14
USP9X-202ENST00000378308 HOXB7P09629 217 aa14.17□□□□□ -0.14
USP9X-202ENST00000378308 FAM182BQ5T319 152 aa14.17□□□□□ -0.14
USP9X-202ENST00000378308 GRAMD1CQ8IYS0 662 aa14.17□□□□□ -0.14
USP9X-202ENST00000378308 EFHBQ8N7U6 833 aa14.17□□□□□ -0.14
USP9X-202ENST00000378308 SYT2Q8N9I0 419 aaPredicted RBP14.17□□□□□ -0.14
USP9X-202ENST00000378308 ZNF229Q9UJW7 825 aa14.17□□□□□ -0.14
USP9X-202ENST00000378308 PARD3Q8TEW0 1356 aa14.17□□□□□ -0.14
USP9X-202ENST00000378308 RASA4BC9J798 803 aa14.17□□□□□ -0.14
USP9X-202ENST00000378308 RASA4O43374 803 aa14.17□□□□□ -0.14
USP9X-202ENST00000378308 LDHAP00338 332 aaKnown RBP14.17□□□□□ -0.14
USP9X-202ENST00000378308 CYBBP04839 570 aa14.17□□□□□ -0.14
USP9X-202ENST00000378308 ADORA2BP29275 332 aa14.17□□□□□ -0.14
USP9X-202ENST00000378308 C16orf72Q14CZ0 275 aa14.17□□□□□ -0.14
USP9X-202ENST00000378308 C11orf74Q86VG3 221 aa14.17□□□□□ -0.14
USP9X-202ENST00000378308 RMDN3Q96TC7 470 aa14.17□□□□□ -0.14
USP9X-202ENST00000378308 COPRSQ9NQ92 184 aa14.17□□□□□ -0.14
USP9X-202ENST00000378308 IKBKBO14920 756 aa14.16□□□□□ -0.14
USP9X-202ENST00000378308 UPP2O95045 317 aa14.16□□□□□ -0.14
USP9X-202ENST00000378308 PDHA1P08559 390 aa14.16□□□□□ -0.14
USP9X-202ENST00000378308 IRF1P10914 325 aa14.16□□□□□ -0.14
USP9X-202ENST00000378308 KCNQ4P56696 695 aa14.16□□□□□ -0.14
USP9X-202ENST00000378308 NAALADL2Q58DX5 795 aa14.16□□□□□ -0.14
USP9X-202ENST00000378308 ICA1LQ8NDH6 482 aa14.16□□□□□ -0.14
USP9X-202ENST00000378308 ARMC2Q8NEN0 867 aa14.16□□□□□ -0.14
USP9X-202ENST00000378308 ZNF668Q96K58 619 aaPredicted RBP14.16□□□□□ -0.14
USP9X-202ENST00000378308 ZHX2Q9Y6X8 837 aa14.16□□□□□ -0.14
USP9X-202ENST00000378308 ABCB11O95342 1321 aa14.16□□□□□ -0.14
USP9X-202ENST00000378308 KCNA2P16389 499 aa14.16□□□□□ -0.14
USP9X-202ENST00000378308 COBLL1Q53SF7 1204 aa14.16□□□□□ -0.14
USP9X-202ENST00000378308 PITPNM3Q9BZ71 974 aa14.16□□□□□ -0.14
USP9X-202ENST00000378308 SPTLC3Q9NUV7 552 aa14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms