RNA–Protein interactions for RNA: ENST00000378307.9

RAB4B-202, Transcript of RAB4B, member RAS oncogene family, humanhuman

TSL 1 (best)

Gene RAB4B, Length 890 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB4B-202ENST00000378307 FERMT3Q86UX7 667 aa17.16■□□□□ 0.34
RAB4B-202ENST00000378307 ZNF410Q86VK4 478 aa17.16■□□□□ 0.34
RAB4B-202ENST00000378307 MTRQ99707 1265 aa17.16■□□□□ 0.34
RAB4B-202ENST00000378307 POLR3CQ9BUI4 534 aaPredicted RBP17.16■□□□□ 0.34
RAB4B-202ENST00000378307 TMEM161AQ9NX61 479 aa17.16■□□□□ 0.34
RAB4B-202ENST00000378307 TBKBP1A7MCY6 615 aa17.15■□□□□ 0.34
RAB4B-202ENST00000378307 DLL1O00548 723 aa17.15■□□□□ 0.34
RAB4B-202ENST00000378307 ZSCAN20P17040 1043 aaPredicted RBP17.15■□□□□ 0.34
RAB4B-202ENST00000378307 FXR2P51116 673 aaKnown RBP eCLIP17.15■□□□□ 0.34
RAB4B-202ENST00000378307 CAMK1Q14012 370 aa17.15■□□□□ 0.34
RAB4B-202ENST00000378307 SKIV2LQ15477 1246 aaKnown RBP17.15■□□□□ 0.34
RAB4B-202ENST00000378307 POTEGQ6S5H5 508 aa17.15■□□□□ 0.34
RAB4B-202ENST00000378307 FAM43BQ6ZT52 329 aaPredicted RBP17.15■□□□□ 0.34
RAB4B-202ENST00000378307 ZNF598Q86UK7 904 aaKnown RBP17.15■□□□□ 0.34
RAB4B-202ENST00000378307 ECHDC2Q86YB7 292 aa17.15■□□□□ 0.34
RAB4B-202ENST00000378307 ASAP3Q8TDY4 903 aa17.15■□□□□ 0.34
RAB4B-202ENST00000378307 PSPC1Q8WXF1 523 aaKnown RBP17.15■□□□□ 0.34
RAB4B-202ENST00000378307 MRPL38Q96DV4 380 aaKnown RBP17.15■□□□□ 0.34
RAB4B-202ENST00000378307 CASD1Q96PB1 797 aa17.15■□□□□ 0.34
RAB4B-202ENST00000378307 ELAC1Q9H777 363 aaKnown RBP17.15■□□□□ 0.34
RAB4B-202ENST00000378307 TUFT1Q9NNX1 390 aa17.15■□□□□ 0.34
RAB4B-202ENST00000378307 ALG13Q9NP73 1137 aaKnown RBP17.15■□□□□ 0.34
RAB4B-202ENST00000378307 EIF4ENIF1Q9NRA8 985 aaKnown RBP17.15■□□□□ 0.34
RAB4B-202ENST00000378307 KIF3AQ9Y496 699 aa17.15■□□□□ 0.34
RAB4B-202ENST00000378307 PLXNA4Q9HCM2 1894 aa17.15■□□□□ 0.34
RAB4B-202ENST00000378307 TCF20Q9UGU0 1960 aaKnown RBP17.15■□□□□ 0.34
RAB4B-202ENST00000378307 CUL9Q8IWT3 2517 aa17.14■□□□□ 0.33
RAB4B-202ENST00000378307 A0A0U1RQF3 1178 aa17.14■□□□□ 0.33
RAB4B-202ENST00000378307 RB1P06400 928 aa17.14■□□□□ 0.33
RAB4B-202ENST00000378307 RPA1P27694 616 aa17.14■□□□□ 0.33
RAB4B-202ENST00000378307 ARL2P36404 184 aa17.14■□□□□ 0.33
RAB4B-202ENST00000378307 LARP1BQ659C4 914 aaKnown RBP17.14■□□□□ 0.33
RAB4B-202ENST00000378307 LRRC55Q6ZSA7 311 aa17.14■□□□□ 0.33
RAB4B-202ENST00000378307 EXOC8Q8IYI6 725 aa17.14■□□□□ 0.33
RAB4B-202ENST00000378307 RNF149Q8NC42 400 aa17.14■□□□□ 0.33
RAB4B-202ENST00000378307 ATP6V0A4Q9HBG4 840 aa17.14■□□□□ 0.33
RAB4B-202ENST00000378307 GPRC5CQ9NQ84 441 aa17.14■□□□□ 0.33
RAB4B-202ENST00000378307 THEGQ9P2T0 379 aa17.14■□□□□ 0.33
RAB4B-202ENST00000378307 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.14■□□□□ 0.33
RAB4B-202ENST00000378307 MEIS3P2A8K0S8 358 aa17.13■□□□□ 0.33
RAB4B-202ENST00000378307 PP2D1A8MPX8 630 aa17.13■□□□□ 0.33
RAB4B-202ENST00000378307 H3BQV1 296 aa17.13■□□□□ 0.33
RAB4B-202ENST00000378307 USO1O60763 962 aaKnown RBP17.13■□□□□ 0.33
RAB4B-202ENST00000378307 DGAT1O75907 488 aa17.13■□□□□ 0.33
RAB4B-202ENST00000378307 CSPG5O95196 566 aa17.13■□□□□ 0.33
RAB4B-202ENST00000378307 ITGB1P05556 798 aa17.13■□□□□ 0.33
RAB4B-202ENST00000378307 XRCC6P12956 609 aaKnown RBP eCLIP17.13■□□□□ 0.33
RAB4B-202ENST00000378307 SFPQP23246 707 aaKnown RBP eCLIP17.13■□□□□ 0.33
RAB4B-202ENST00000378307 DNAJB1P25685 340 aa17.13■□□□□ 0.33
RAB4B-202ENST00000378307 CDC25AP30304 524 aa17.13■□□□□ 0.33
RAB4B-202ENST00000378307 HOXA11P31270 313 aaPredicted RBP17.13■□□□□ 0.33
RAB4B-202ENST00000378307 LONRF3Q496Y0 759 aa17.13■□□□□ 0.33
RAB4B-202ENST00000378307 CLLU1OSQ5K130 101 aa17.13■□□□□ 0.33
RAB4B-202ENST00000378307 MAEAQ7L5Y9 396 aa17.13■□□□□ 0.33
RAB4B-202ENST00000378307 CATSPER4Q7RTX7 472 aa17.13■□□□□ 0.33
RAB4B-202ENST00000378307 IGSF22Q8N9C0 903 aa17.13■□□□□ 0.33
RAB4B-202ENST00000378307 KLHL23Q8NBE8 558 aa17.13■□□□□ 0.33
RAB4B-202ENST00000378307 TCP11Q8WWU5 503 aa17.13■□□□□ 0.33
RAB4B-202ENST00000378307 LPPQ93052 612 aa17.13■□□□□ 0.33
RAB4B-202ENST00000378307 CWH43Q9H720 699 aa17.13■□□□□ 0.33
RAB4B-202ENST00000378307 CHST12Q9NRB3 414 aa17.13■□□□□ 0.33
RAB4B-202ENST00000378307 TYW1Q9NV66 732 aaKnown RBP17.13■□□□□ 0.33
RAB4B-202ENST00000378307 LRWD1Q9UFC0 647 aa17.13■□□□□ 0.33
RAB4B-202ENST00000378307 PLAGL2Q9UPG8 496 aa17.13■□□□□ 0.33
RAB4B-202ENST00000378307 PIN4Q9Y237 131 aaKnown RBP17.13■□□□□ 0.33
RAB4B-202ENST00000378307 ASAP2O43150 1006 aa17.12■□□□□ 0.33
RAB4B-202ENST00000378307 GAS2O43903 313 aaKnown RBP17.12■□□□□ 0.33
RAB4B-202ENST00000378307 GLRA2P23416 452 aa17.12■□□□□ 0.33
RAB4B-202ENST00000378307 PHKA2P46019 1235 aa17.12■□□□□ 0.33
RAB4B-202ENST00000378307 CAPSQ13938 189 aa17.12■□□□□ 0.33
RAB4B-202ENST00000378307 SRGAP1Q7Z6B7 1085 aa17.12■□□□□ 0.33
RAB4B-202ENST00000378307 RNF169Q8NCN4 708 aa17.12■□□□□ 0.33
RAB4B-202ENST00000378307 SPPL3Q8TCT6 385 aa17.12■□□□□ 0.33
RAB4B-202ENST00000378307 ATXN2LQ8WWM7 1075 aaKnown RBP17.12■□□□□ 0.33
RAB4B-202ENST00000378307 ASB2Q96Q27 587 aa17.12■□□□□ 0.33
RAB4B-202ENST00000378307 NACC1Q96RE7 527 aa17.12■□□□□ 0.33
RAB4B-202ENST00000378307 C11orf84Q9BUA3 381 aaPredicted RBP17.12■□□□□ 0.33
RAB4B-202ENST00000378307 PLVAPQ9BX97 442 aa17.12■□□□□ 0.33
RAB4B-202ENST00000378307 INO80BQ9C086 356 aaPredicted RBP17.12■□□□□ 0.33
RAB4B-202ENST00000378307 POLD4Q9HCU8 107 aa17.12■□□□□ 0.33
RAB4B-202ENST00000378307 AGPAT5Q9NUQ2 364 aa17.12■□□□□ 0.33
RAB4B-202ENST00000378307 DBR1Q9UK59 544 aaKnown RBP17.12■□□□□ 0.33
RAB4B-202ENST00000378307 RWDD3Q9Y3V2 267 aa17.12■□□□□ 0.33
RAB4B-202ENST00000378307 CCT6AP40227 531 aaKnown RBP17.11■□□□□ 0.33
RAB4B-202ENST00000378307 KCNQ1P51787 676 aa17.11■□□□□ 0.33
RAB4B-202ENST00000378307 PTENP60484 403 aa17.11■□□□□ 0.33
RAB4B-202ENST00000378307 PDIA5Q14554 519 aa17.11■□□□□ 0.33
RAB4B-202ENST00000378307 RILPL1Q5EBL4 403 aa17.11■□□□□ 0.33
RAB4B-202ENST00000378307 TCEAL5Q5H9L2 206 aa17.11■□□□□ 0.33
RAB4B-202ENST00000378307 TWF2Q6IBS0 349 aaKnown RBP17.11■□□□□ 0.33
RAB4B-202ENST00000378307 ERMNQ8TAM6 284 aa17.11■□□□□ 0.33
RAB4B-202ENST00000378307 HELQQ8TDG4 1101 aa17.11■□□□□ 0.33
RAB4B-202ENST00000378307 P2RX5Q93086 422 aa17.11■□□□□ 0.33
RAB4B-202ENST00000378307 MMTAG2Q9BU76 263 aaKnown RBP17.11■□□□□ 0.33
RAB4B-202ENST00000378307 TRAIPQ9BWF2 469 aa17.11■□□□□ 0.33
RAB4B-202ENST00000378307 TMEM117Q9H0C3 514 aa17.11■□□□□ 0.33
RAB4B-202ENST00000378307 EOMESO95936 686 aa17.1■□□□□ 0.33
RAB4B-202ENST00000378307 IRS1P35568 1242 aa17.1■□□□□ 0.33
RAB4B-202ENST00000378307 PBX3P40426 434 aa17.1■□□□□ 0.33
RAB4B-202ENST00000378307 MRPS5P82675 430 aaKnown RBP17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms