RNA–Protein interactions for RNA: ENST00000378169.7

NPHP4-203, Transcript of nephrocystin 4, humanhuman

TSL 1 (best)

Gene NPHP4, Length 4,213 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-203ENST00000378169 IL1R1P14778 569 aa14.19□□□□□ -0.14
NPHP4-203ENST00000378169 CYP11B2P19099 503 aa14.19□□□□□ -0.14
NPHP4-203ENST00000378169 RPS6P62753 249 aaKnown RBP14.19□□□□□ -0.14
NPHP4-203ENST00000378169 APBA1Q02410 837 aa14.19□□□□□ -0.14
NPHP4-203ENST00000378169 ZNF568Q3ZCX4 644 aa14.19□□□□□ -0.14
NPHP4-203ENST00000378169 LGSNQ5TDP6 509 aa14.19□□□□□ -0.14
NPHP4-203ENST00000378169 APOBEC3FQ8IUX4 373 aaKnown RBP14.19□□□□□ -0.14
NPHP4-203ENST00000378169 TMEM143Q96AN5 459 aa14.19□□□□□ -0.14
NPHP4-203ENST00000378169 RPS6KC1Q96S38 1066 aa14.19□□□□□ -0.14
NPHP4-203ENST00000378169 MYOZ2Q9NPC6 264 aa14.19□□□□□ -0.14
NPHP4-203ENST00000378169 NGRNQ9NPE2 291 aaKnown RBP14.19□□□□□ -0.14
NPHP4-203ENST00000378169 KCNH7Q9NS40 1196 aa14.19□□□□□ -0.14
NPHP4-203ENST00000378169 SLC9A2Q9UBY0 812 aa14.19□□□□□ -0.14
NPHP4-203ENST00000378169 ARHGAP25P42331 645 aa14.19□□□□□ -0.14
NPHP4-203ENST00000378169 ACOT2P49753 483 aa14.19□□□□□ -0.14
NPHP4-203ENST00000378169 PPP2R5CQ13362 524 aa14.19□□□□□ -0.14
NPHP4-203ENST00000378169 ZNF667Q5HYK9 610 aa14.19□□□□□ -0.14
NPHP4-203ENST00000378169 STYK1Q6J9G0 422 aa14.19□□□□□ -0.14
NPHP4-203ENST00000378169 LPAR1Q92633 364 aa14.19□□□□□ -0.14
NPHP4-203ENST00000378169 RUNDC3BQ96NL0 473 aa14.19□□□□□ -0.14
NPHP4-203ENST00000378169 MTRQ99707 1265 aa14.19□□□□□ -0.14
NPHP4-203ENST00000378169 ANAPC5Q9UJX4 755 aa14.19□□□□□ -0.14
NPHP4-203ENST00000378169 CYP26A1O43174 497 aa14.19□□□□□ -0.14
NPHP4-203ENST00000378169 TERF2Q15554 542 aa14.19□□□□□ -0.14
NPHP4-203ENST00000378169 SLC18A3Q16572 532 aa14.19□□□□□ -0.14
NPHP4-203ENST00000378169 GEN1Q17RS7 908 aa14.19□□□□□ -0.14
NPHP4-203ENST00000378169 ERICH1Q86X53 443 aa14.19□□□□□ -0.14
NPHP4-203ENST00000378169 MAP7D3Q8IWC1 876 aa14.19□□□□□ -0.14
NPHP4-203ENST00000378169 ZFPM1Q8IX07 1006 aa14.19□□□□□ -0.14
NPHP4-203ENST00000378169 FRMD4AQ9P2Q2 1039 aaPredicted RBP14.19□□□□□ -0.14
NPHP4-203ENST00000378169 CCDC188H7C350 402 aa14.18□□□□□ -0.14
NPHP4-203ENST00000378169 POLRMTO00411 1230 aaKnown RBP14.18□□□□□ -0.14
NPHP4-203ENST00000378169 CTNND1O60716 968 aaKnown RBP14.18□□□□□ -0.14
NPHP4-203ENST00000378169 BASP1P80723 227 aaKnown RBP14.18□□□□□ -0.14
NPHP4-203ENST00000378169 CATSPER4Q7RTX7 472 aa14.18□□□□□ -0.14
NPHP4-203ENST00000378169 REXO1L1PQ8IX06 675 aa14.18□□□□□ -0.14
NPHP4-203ENST00000378169 ZNF280CQ8ND82 737 aa14.18□□□□□ -0.14
NPHP4-203ENST00000378169 P3H4Q92791 437 aa14.18□□□□□ -0.14
NPHP4-203ENST00000378169 LRRC1Q9BTT6 524 aa14.18□□□□□ -0.14
NPHP4-203ENST00000378169 SNX12Q9UMY4 172 aa14.18□□□□□ -0.14
NPHP4-203ENST00000378169 SSX2IPQ9Y2D8 614 aa14.18□□□□□ -0.14
NPHP4-203ENST00000378169 CAPN7Q9Y6W3 813 aa14.18□□□□□ -0.14
NPHP4-203ENST00000378169 ZRANB2O95218 330 aaKnown RBP eCLIP14.18□□□□□ -0.14
NPHP4-203ENST00000378169 LDHAP00338 332 aaKnown RBP14.18□□□□□ -0.14
NPHP4-203ENST00000378169 SOX5P35711 763 aa14.18□□□□□ -0.14
NPHP4-203ENST00000378169 PMS1P54277 932 aaKnown RBP14.18□□□□□ -0.14
NPHP4-203ENST00000378169 CCDC125Q86Z20 511 aa14.18□□□□□ -0.14
NPHP4-203ENST00000378169 NOA1Q8NC60 698 aaKnown RBP14.18□□□□□ -0.14
NPHP4-203ENST00000378169 FBXL13Q8NEE6 735 aa14.18□□□□□ -0.14
NPHP4-203ENST00000378169 CYP2W1Q8TAV3 490 aa14.18□□□□□ -0.14
NPHP4-203ENST00000378169 EDEM3Q9BZQ6 932 aa14.18□□□□□ -0.14
NPHP4-203ENST00000378169 MIS12Q9H081 205 aa14.18□□□□□ -0.14
NPHP4-203ENST00000378169 RIOX1Q9H6W3 641 aa14.18□□□□□ -0.14
NPHP4-203ENST00000378169 ZWILCHQ9H900 591 aa14.18□□□□□ -0.14
NPHP4-203ENST00000378169 DUSP10Q9Y6W6 482 aa14.18□□□□□ -0.14
NPHP4-203ENST00000378169 NDC80O14777 642 aa14.18□□□□□ -0.14
NPHP4-203ENST00000378169 EVI5O60447 810 aa14.18□□□□□ -0.14
NPHP4-203ENST00000378169 SHMT1P34896 483 aa14.18□□□□□ -0.14
NPHP4-203ENST00000378169 ERVK-24P63145 666 aa14.18□□□□□ -0.14
NPHP4-203ENST00000378169 IFT88Q13099 833 aa14.18□□□□□ -0.14
NPHP4-203ENST00000378169 NEDD9Q14511 834 aa14.18□□□□□ -0.14
NPHP4-203ENST00000378169 TTI2Q6NXR4 508 aa14.18□□□□□ -0.14
NPHP4-203ENST00000378169 WHAMMQ8TF30 809 aa14.18□□□□□ -0.14
NPHP4-203ENST00000378169 ZKSCAN4Q969J2 545 aaPredicted RBP14.18□□□□□ -0.14
NPHP4-203ENST00000378169 RNF25Q96BH1 459 aaPredicted RBP14.18□□□□□ -0.14
NPHP4-203ENST00000378169 FAM81BQ96LP2 452 aa14.18□□□□□ -0.14
NPHP4-203ENST00000378169 AP5M1Q9H0R1 490 aa14.18□□□□□ -0.14
NPHP4-203ENST00000378169 RBAKQ9NYW8 714 aaPredicted RBP14.18□□□□□ -0.14
NPHP4-203ENST00000378169 AMACRQ9UHK6 382 aa14.18□□□□□ -0.14
NPHP4-203ENST00000378169 A6NJR5 290 aa14.17□□□□□ -0.14
NPHP4-203ENST00000378169 HSPA6P17066 643 aa14.17□□□□□ -0.14
NPHP4-203ENST00000378169 GGCXP38435 758 aa14.17□□□□□ -0.14
NPHP4-203ENST00000378169 NBPF9Q3BBW0 867 aa14.17□□□□□ -0.14
NPHP4-203ENST00000378169 ELP3Q9H9T3 547 aa14.17□□□□□ -0.14
NPHP4-203ENST00000378169 BAIAP2L1Q9UHR4 511 aa14.17□□□□□ -0.14
NPHP4-203ENST00000378169 AGO2Q9UKV8 859 aaKnown RBP14.17□□□□□ -0.14
NPHP4-203ENST00000378169 PABPN1LA6NDY0 278 aaKnown RBP14.17□□□□□ -0.14
NPHP4-203ENST00000378169 MYCP01106 439 aaPredicted RBP14.17□□□□□ -0.14
NPHP4-203ENST00000378169 FMO5P49326 533 aa14.17□□□□□ -0.14
NPHP4-203ENST00000378169 GTF2A1P52655 376 aaPredicted RBP14.17□□□□□ -0.14
NPHP4-203ENST00000378169 HDLBPQ00341 1268 aaKnown RBP14.17□□□□□ -0.14
NPHP4-203ENST00000378169 ANKRD20A3Q5VUR7 823 aa14.17□□□□□ -0.14
NPHP4-203ENST00000378169 GJB7Q6PEY0 223 aa14.17□□□□□ -0.14
NPHP4-203ENST00000378169 ELOA2Q8IYF1 753 aaPredicted RBP14.17□□□□□ -0.14
NPHP4-203ENST00000378169 ZNF564Q8TBZ8 553 aaPredicted RBP14.17□□□□□ -0.14
NPHP4-203ENST00000378169 EXOC4Q96A65 974 aa14.17□□□□□ -0.14
NPHP4-203ENST00000378169 KIFC3Q9BVG8 833 aa14.17□□□□□ -0.14
NPHP4-203ENST00000378169 LRRC4BQ9NT99 713 aa14.17□□□□□ -0.14
NPHP4-203ENST00000378169 HSPBP1Q9NZL4 362 aa14.17□□□□□ -0.14
NPHP4-203ENST00000378169 CHORDC1Q9UHD1 332 aaPredicted RBP14.17□□□□□ -0.14
NPHP4-203ENST00000378169 CD2APQ9Y5K6 639 aa14.17□□□□□ -0.14
NPHP4-203ENST00000378169 PDCLQ13371 301 aa14.17□□□□□ -0.14
NPHP4-203ENST00000378169 EDRF1Q3B7T1 1238 aa14.17□□□□□ -0.14
NPHP4-203ENST00000378169 RNF149Q8NC42 400 aa14.17□□□□□ -0.14
NPHP4-203ENST00000378169 PPM1EQ8WY54 764 aa14.17□□□□□ -0.14
NPHP4-203ENST00000378169 TAAR1Q96RJ0 339 aa14.17□□□□□ -0.14
NPHP4-203ENST00000378169 NUP85Q9BW27 656 aa14.17□□□□□ -0.14
NPHP4-203ENST00000378169 NR1D1P20393 614 aa14.17□□□□□ -0.14
NPHP4-203ENST00000378169 GALCP54803 685 aa14.17□□□□□ -0.14
NPHP4-203ENST00000378169 DMTNQ08495 405 aa14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms