RNA–Protein interactions for RNA: ENST00000378078.4

RGP1-201, Transcript of RGP1 homolog, RAB6A GEF complex partner 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RGP1, Length 7,018 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGP1-201ENST00000378078 CA4P22748 312 aa17.39■□□□□ 0.37
RGP1-201ENST00000378078 NFKBIAP25963 317 aa17.39■□□□□ 0.37
RGP1-201ENST00000378078 PRAMEP78395 509 aa17.39■□□□□ 0.37
RGP1-201ENST00000378078 EN1Q05925 392 aaPredicted RBP17.39■□□□□ 0.37
RGP1-201ENST00000378078 SGO1Q5FBB7 561 aa17.39■□□□□ 0.37
RGP1-201ENST00000378078 ELAC2Q9BQ52 826 aaKnown RBP17.39■□□□□ 0.37
RGP1-201ENST00000378078 DHX35Q9H5Z1 703 aaKnown RBP17.39■□□□□ 0.37
RGP1-201ENST00000378078 TMEM161AQ9NX61 479 aa17.39■□□□□ 0.37
RGP1-201ENST00000378078 ZBTB12Q9Y330 459 aaPredicted RBP17.39■□□□□ 0.37
RGP1-201ENST00000378078 TRAPPC8Q9Y2L5 1435 aa17.39■□□□□ 0.37
RGP1-201ENST00000378078 ZC3H18Q86VM9 953 aaKnown RBP17.39■□□□□ 0.37
RGP1-201ENST00000378078 TRIM42Q8IWZ5 723 aa17.39■□□□□ 0.37
RGP1-201ENST00000378078 NPHP3-ACAD11A0A0J9YXS1 232 aa17.39■□□□□ 0.37
RGP1-201ENST00000378078 POTEMA6NI47 508 aa17.39■□□□□ 0.37
RGP1-201ENST00000378078 A6NNZ2 444 aa17.39■□□□□ 0.37
RGP1-201ENST00000378078 USP17L15C9J2P7 530 aa17.39■□□□□ 0.37
RGP1-201ENST00000378078 USP17L13C9JLJ4 530 aa17.39■□□□□ 0.37
RGP1-201ENST00000378078 USP17L11C9JVI0 530 aa17.39■□□□□ 0.37
RGP1-201ENST00000378078 USP17L18D6R9N7 530 aa17.39■□□□□ 0.37
RGP1-201ENST00000378078 USP17L22D6RA61 530 aa17.39■□□□□ 0.37
RGP1-201ENST00000378078 USP17L17D6RBQ6 530 aa17.39■□□□□ 0.37
RGP1-201ENST00000378078 USP17L19D6RCP7 530 aa17.39■□□□□ 0.37
RGP1-201ENST00000378078 USP17L20D6RJB6 530 aa17.39■□□□□ 0.37
RGP1-201ENST00000378078 TADA2AO75478 443 aa17.39■□□□□ 0.37
RGP1-201ENST00000378078 USP17L24Q0WX57 530 aa17.39■□□□□ 0.37
RGP1-201ENST00000378078 DMC1Q14565 340 aa17.39■□□□□ 0.37
RGP1-201ENST00000378078 TUBB8Q3ZCM7 444 aa17.39■□□□□ 0.37
RGP1-201ENST00000378078 USP17L6PQ6QN14 398 aa17.39■□□□□ 0.37
RGP1-201ENST00000378078 CHMP1BQ7LBR1 199 aa17.39■□□□□ 0.37
RGP1-201ENST00000378078 TJP3O95049 919 aa17.39■□□□□ 0.37
RGP1-201ENST00000378078 SLFN14P0C7P3 912 aa17.39■□□□□ 0.37
RGP1-201ENST00000378078 SYNE4Q8N205 404 aa17.39■□□□□ 0.37
RGP1-201ENST00000378078 RGL1Q9NZL6 768 aa17.39■□□□□ 0.37
RGP1-201ENST00000378078 STX18Q9P2W9 335 aaKnown RBP17.39■□□□□ 0.37
RGP1-201ENST00000378078 HOXD10P28358 340 aa17.38■□□□□ 0.37
RGP1-201ENST00000378078 NNTQ13423 1086 aa17.38■□□□□ 0.37
RGP1-201ENST00000378078 EFTUD2Q15029 972 aaKnown RBP eCLIP17.38■□□□□ 0.376e-6■■■□□ 18.7
RGP1-201ENST00000378078 ATP11CQ8NB49 1132 aa17.38■□□□□ 0.37
RGP1-201ENST00000378078 SERPINI1Q99574 410 aa17.38■□□□□ 0.37
RGP1-201ENST00000378078 GABBR1Q9UBS5 961 aa17.38■□□□□ 0.37
RGP1-201ENST00000378078 NFU1Q9UMS0 254 aa17.38■□□□□ 0.37
RGP1-201ENST00000378078 ANKRD65E5RJM6 399 aa17.38■□□□□ 0.37
RGP1-201ENST00000378078 SNAP23O00161 211 aa17.38■□□□□ 0.37
RGP1-201ENST00000378078 PRRG1O14668 218 aa17.38■□□□□ 0.37
RGP1-201ENST00000378078 SERPING1P05155 500 aa17.38■□□□□ 0.37
RGP1-201ENST00000378078 ETFBP38117 255 aa17.38■□□□□ 0.37
RGP1-201ENST00000378078 GFPT1Q06210 699 aaPredicted RBP17.38■□□□□ 0.37
RGP1-201ENST00000378078 POLR3FQ9H1D9 316 aaPredicted RBP17.38■□□□□ 0.37
RGP1-201ENST00000378078 MED4Q9NPJ6 270 aa17.38■□□□□ 0.37
RGP1-201ENST00000378078 ARHGAP26Q9UNA1 814 aa17.38■□□□□ 0.37
RGP1-201ENST00000378078 ZNF518AQ6AHZ1 1483 aa17.38■□□□□ 0.37
RGP1-201ENST00000378078 SPATA2LQ8IUW3 424 aaPredicted RBP17.38■□□□□ 0.37
RGP1-201ENST00000378078 ANKS3Q6ZW76 656 aa17.38■□□□□ 0.37
RGP1-201ENST00000378078 EIF2AQ9BY44 585 aaKnown RBP17.38■□□□□ 0.37
RGP1-201ENST00000378078 TJP2Q9UDY2 1190 aa17.38■□□□□ 0.37
RGP1-201ENST00000378078 PIN4Q9Y237 131 aaKnown RBP17.38■□□□□ 0.37
RGP1-201ENST00000378078 PRAG1Q86YV5 1406 aa17.38■□□□□ 0.37
RGP1-201ENST00000378078 AOX1Q06278 1338 aa17.38■□□□□ 0.37
RGP1-201ENST00000378078 TRIM49BA6NDI0 452 aa17.38■□□□□ 0.37
RGP1-201ENST00000378078 SULT1E1P49888 294 aa17.38■□□□□ 0.37
RGP1-201ENST00000378078 MAPK6Q16659 721 aa17.38■□□□□ 0.37
RGP1-201ENST00000378078 MAN2A1Q16706 1144 aa17.38■□□□□ 0.37
RGP1-201ENST00000378078 RUBCNLQ9H714 662 aa17.38■□□□□ 0.37
RGP1-201ENST00000378078 ZSWIM5Q9P217 1185 aa17.38■□□□□ 0.37
RGP1-201ENST00000378078 A8MXQ7 604 aa17.37■□□□□ 0.37
RGP1-201ENST00000378078 ORC4O43929 436 aa17.37■□□□□ 0.37
RGP1-201ENST00000378078 FGGP02679 453 aa17.37■□□□□ 0.37
RGP1-201ENST00000378078 MAP4P27816 1152 aaKnown RBP17.37■□□□□ 0.37
RGP1-201ENST00000378078 CCHCR1Q8TD31 782 aa17.37■□□□□ 0.37
RGP1-201ENST00000378078 CDHR1Q96JP9 859 aa17.37■□□□□ 0.37
RGP1-201ENST00000378078 CCDC17Q96LX7 622 aa17.37■□□□□ 0.37
RGP1-201ENST00000378078 ZNF212Q9UDV6 495 aa17.37■□□□□ 0.37
RGP1-201ENST00000378078 V9GYQ6 96 aa17.37■□□□□ 0.37
RGP1-201ENST00000378078 KIAA0232Q92628 1395 aa17.37■□□□□ 0.37
RGP1-201ENST00000378078 CHL1O00533 1208 aa17.37■□□□□ 0.37
RGP1-201ENST00000378078 PALMO75781 387 aa17.37■□□□□ 0.37
RGP1-201ENST00000378078 HSPA8P11142 646 aaKnown RBP17.37■□□□□ 0.37
RGP1-201ENST00000378078 IMPDH2P12268 514 aa17.37■□□□□ 0.37
RGP1-201ENST00000378078 PHKA2P46019 1235 aa17.37■□□□□ 0.37
RGP1-201ENST00000378078 RPAINQ86UA6 219 aa17.37■□□□□ 0.37
RGP1-201ENST00000378078 ANKMY2Q8IV38 441 aa17.37■□□□□ 0.37
RGP1-201ENST00000378078 MYO1GB0I1T2 1018 aa17.37■□□□□ 0.37
RGP1-201ENST00000378078 SOAT1P35610 550 aa17.37■□□□□ 0.37
RGP1-201ENST00000378078 PDCLQ13371 301 aa17.37■□□□□ 0.37
RGP1-201ENST00000378078 UNC45AQ9H3U1 944 aa17.37■□□□□ 0.37
RGP1-201ENST00000378078 ADAM22Q9P0K1 906 aa17.37■□□□□ 0.37
RGP1-201ENST00000378078 THEGQ9P2T0 379 aa17.37■□□□□ 0.37
RGP1-201ENST00000378078 PNMA6FA0A0J9YX94 578 aa17.37■□□□□ 0.37
RGP1-201ENST00000378078 SKOR1P84550 965 aa17.37■□□□□ 0.37
RGP1-201ENST00000378078 GTF2H3Q13889 308 aa17.37■□□□□ 0.37
RGP1-201ENST00000378078 BTBD8Q5XKL5 378 aa17.37■□□□□ 0.37
RGP1-201ENST00000378078 MFN1Q8IWA4 741 aa17.37■□□□□ 0.37
RGP1-201ENST00000378078 PPM1NQ8N819 430 aa17.37■□□□□ 0.37
RGP1-201ENST00000378078 GJB4Q9NTQ9 266 aa17.37■□□□□ 0.37
RGP1-201ENST00000378078 AURKCQ9UQB9 309 aa17.37■□□□□ 0.37
RGP1-201ENST00000378078 AARSP49588 968 aaKnown RBP eCLIP17.37■□□□□ 0.37
RGP1-201ENST00000378078 WASHC5Q12768 1159 aa17.37■□□□□ 0.37
RGP1-201ENST00000378078 TRIM55Q9BYV6 548 aa17.37■□□□□ 0.37
RGP1-201ENST00000378078 UGGT2Q9NYU1 1516 aa17.37■□□□□ 0.37
RGP1-201ENST00000378078 EDC4Q6P2E9 1401 aaKnown RBP17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms