RNA–Protein interactions for RNA: ENST00000376570.8

DDR1-227, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene DDR1, Length 3,820 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-227ENST00000376570 ZNF507Q8TCN5 953 aa12.63□□□□□ -0.39
DDR1-227ENST00000376570 ELP3Q9H9T3 547 aa12.63□□□□□ -0.39
DDR1-227ENST00000376570 TYW1Q9NV66 732 aaKnown RBP12.63□□□□□ -0.39
DDR1-227ENST00000376570 PCDHB4Q9Y5E5 795 aa12.63□□□□□ -0.39
DDR1-227ENST00000376570 NUP98P52948 1817 aa12.63□□□□□ -0.39
DDR1-227ENST00000376570 MAP3K6O95382 1288 aa12.63□□□□□ -0.39
DDR1-227ENST00000376570 VIMP08670 466 aaKnown RBP12.63□□□□□ -0.39
DDR1-227ENST00000376570 FAM153BP0C7A2 387 aa12.63□□□□□ -0.39
DDR1-227ENST00000376570 PIK3CAP42336 1068 aa12.63□□□□□ -0.39
DDR1-227ENST00000376570 QARSP47897 775 aaKnown RBP12.63□□□□□ -0.39
DDR1-227ENST00000376570 CNTN2Q02246 1040 aa12.63□□□□□ -0.39
DDR1-227ENST00000376570 PSMD2Q13200 908 aa12.63□□□□□ -0.39
DDR1-227ENST00000376570 FAM153CQ494X1 144 aa12.63□□□□□ -0.39
DDR1-227ENST00000376570 RNF169Q8NCN4 708 aa12.63□□□□□ -0.39
DDR1-227ENST00000376570 FAM151AQ8WW52 585 aa12.63□□□□□ -0.39
DDR1-227ENST00000376570 FAM20AQ96MK3 541 aa12.63□□□□□ -0.39
DDR1-227ENST00000376570 DNAJC7Q99615 494 aa12.63□□□□□ -0.39
DDR1-227ENST00000376570 IMPG2Q9BZV3 1241 aa12.63□□□□□ -0.39
DDR1-227ENST00000376570 FAM153AQ9UHL3 310 aa12.63□□□□□ -0.39
DDR1-227ENST00000376570 SERPINA10Q9UK55 444 aa12.63□□□□□ -0.39
DDR1-227ENST00000376570 ACSL3O95573 720 aa12.62□□□□□ -0.39
DDR1-227ENST00000376570 CAP2P40123 477 aa12.62□□□□□ -0.39
DDR1-227ENST00000376570 GUCY1A3Q02108 690 aa12.62□□□□□ -0.39
DDR1-227ENST00000376570 TNFAIP1Q13829 316 aa12.62□□□□□ -0.39
DDR1-227ENST00000376570 SEL1L2Q5TEA6 688 aa12.62□□□□□ -0.39
DDR1-227ENST00000376570 RTKN2Q8IZC4 609 aa12.62□□□□□ -0.39
DDR1-227ENST00000376570 CCDC33Q8N5R6 958 aa12.62□□□□□ -0.39
DDR1-227ENST00000376570 RNF25Q96BH1 459 aaPredicted RBP12.62□□□□□ -0.39
DDR1-227ENST00000376570 THAP2Q9H0W7 228 aa12.62□□□□□ -0.39
DDR1-227ENST00000376570 PRM3Q9NNZ6 103 aa12.62□□□□□ -0.39
DDR1-227ENST00000376570 STIM2Q9P246 746 aa12.62□□□□□ -0.39
DDR1-227ENST00000376570 UTP11Q9Y3A2 253 aaKnown RBP12.62□□□□□ -0.39
DDR1-227ENST00000376570 CAPN7Q9Y6W3 813 aa12.62□□□□□ -0.39
DDR1-227ENST00000376570 CRYBG1Q9Y4K1 1723 aa12.62□□□□□ -0.39
DDR1-227ENST00000376570 GOLGA8MH3BSY2 632 aa12.62□□□□□ -0.39
DDR1-227ENST00000376570 TRPC3Q13507 836 aa12.62□□□□□ -0.39
DDR1-227ENST00000376570 ZKSCAN8Q15776 578 aaPredicted RBP12.62□□□□□ -0.39
DDR1-227ENST00000376570 BSPRYQ5W0U4 402 aa12.62□□□□□ -0.39
DDR1-227ENST00000376570 LRRC55Q6ZSA7 311 aa12.62□□□□□ -0.39
DDR1-227ENST00000376570 LMBR1Q8WVP7 490 aa12.62□□□□□ -0.39
DDR1-227ENST00000376570 FAM49AQ9H0Q0 323 aaPredicted RBP12.62□□□□□ -0.39
DDR1-227ENST00000376570 METTL14Q9HCE5 456 aaKnown RBP12.62□□□□□ -0.39
DDR1-227ENST00000376570 RIPK3Q9Y572 518 aa12.62□□□□□ -0.39
DDR1-227ENST00000376570 GOLGA6L7A0A1B0GV03 622 aa12.62□□□□□ -0.39
DDR1-227ENST00000376570 GLI1P08151 1106 aa12.62□□□□□ -0.39
DDR1-227ENST00000376570 SPATA31C1P0DKV0 1188 aa12.62□□□□□ -0.39
DDR1-227ENST00000376570 VAMP7P51809 220 aa12.62□□□□□ -0.39
DDR1-227ENST00000376570 PAK2Q13177 524 aa12.62□□□□□ -0.39
DDR1-227ENST00000376570 BEND6Q5SZJ8 279 aaPredicted RBP12.62□□□□□ -0.39
DDR1-227ENST00000376570 CPLX4Q7Z7G2 160 aa12.62□□□□□ -0.39
DDR1-227ENST00000376570 CSADQ9Y600 493 aa12.62□□□□□ -0.39
DDR1-227ENST00000376570 RAD51CO43502 376 aa12.61□□□□□ -0.39
DDR1-227ENST00000376570 FMO5P49326 533 aa12.61□□□□□ -0.39
DDR1-227ENST00000376570 NNTQ13423 1086 aa12.61□□□□□ -0.39
DDR1-227ENST00000376570 GJC2Q5T442 439 aaPredicted RBP12.61□□□□□ -0.39
DDR1-227ENST00000376570 TMEM270Q6UE05 265 aa12.61□□□□□ -0.39
DDR1-227ENST00000376570 SRLQ86TD4 932 aa12.61□□□□□ -0.39
DDR1-227ENST00000376570 SIAH1Q8IUQ4 282 aa12.61□□□□□ -0.39
DDR1-227ENST00000376570 ARL8AQ96BM9 186 aa12.61□□□□□ -0.39
DDR1-227ENST00000376570 FAM163AQ96GL9 167 aaPredicted RBP12.61□□□□□ -0.39
DDR1-227ENST00000376570 AZI2Q9H6S1 392 aa12.61□□□□□ -0.39
DDR1-227ENST00000376570 TELO2Q9Y4R8 837 aa12.61□□□□□ -0.39
DDR1-227ENST00000376570 ZRANB2O95218 330 aaKnown RBP eCLIP12.61□□□□□ -0.39
DDR1-227ENST00000376570 NR3C2P08235 984 aa12.61□□□□□ -0.39
DDR1-227ENST00000376570 CCDC172P0C7W6 258 aa12.61□□□□□ -0.39
DDR1-227ENST00000376570 ITGB5P18084 799 aa12.61□□□□□ -0.39
DDR1-227ENST00000376570 PPP2R5DQ14738 602 aa12.61□□□□□ -0.39
DDR1-227ENST00000376570 KLHDC7AQ5VTJ3 777 aa12.61□□□□□ -0.39
DDR1-227ENST00000376570 SCYL2Q6P3W7 929 aa12.61□□□□□ -0.39
DDR1-227ENST00000376570 CPNE8Q86YQ8 564 aa12.61□□□□□ -0.39
DDR1-227ENST00000376570 SYT2Q8N9I0 419 aaPredicted RBP12.61□□□□□ -0.39
DDR1-227ENST00000376570 SLC35G2Q8TBE7 412 aa12.61□□□□□ -0.39
DDR1-227ENST00000376570 TRAPPC12Q8WVT3 735 aa12.61□□□□□ -0.39
DDR1-227ENST00000376570 ANKS1AQ92625 1134 aa12.61□□□□□ -0.39
DDR1-227ENST00000376570 ZBTB45Q96K62 511 aaPredicted RBP12.61□□□□□ -0.39
DDR1-227ENST00000376570 ACCSQ96QU6 501 aa12.61□□□□□ -0.39
DDR1-227ENST00000376570 ERGIC2Q96RQ1 377 aa12.61□□□□□ -0.39
DDR1-227ENST00000376570 LBHD1Q9BQE6 289 aaPredicted RBP12.61□□□□□ -0.39
DDR1-227ENST00000376570 WRAP73Q9P2S5 460 aaPredicted RBP12.61□□□□□ -0.39
DDR1-227ENST00000376570 NOVA2Q9UNW9 492 aaKnown RBP12.61□□□□□ -0.39
DDR1-227ENST00000376570 ESYT2A0FGR8 921 aa12.61□□□□□ -0.39
DDR1-227ENST00000376570 hCG_1984214I3L0E3 225 aa12.61□□□□□ -0.39
DDR1-227ENST00000376570 OPA1O60313 960 aa12.61□□□□□ -0.39
DDR1-227ENST00000376570 POTEJP0CG39 1038 aa12.61□□□□□ -0.39
DDR1-227ENST00000376570 PBX1P40424 430 aa12.61□□□□□ -0.39
DDR1-227ENST00000376570 SLC18A3Q16572 532 aa12.61□□□□□ -0.39
DDR1-227ENST00000376570 POTEAQ6S8J7 498 aa12.61□□□□□ -0.39
DDR1-227ENST00000376570 PALB2Q86YC2 1186 aa12.61□□□□□ -0.39
DDR1-227ENST00000376570 ZNF713Q8N859 430 aaPredicted RBP12.61□□□□□ -0.39
DDR1-227ENST00000376570 XXYLT1Q8NBI6 393 aa12.61□□□□□ -0.39
DDR1-227ENST00000376570 AGPAT3Q9NRZ7 376 aa12.61□□□□□ -0.39
DDR1-227ENST00000376570 HSPBP1Q9NZL4 362 aa12.61□□□□□ -0.39
DDR1-227ENST00000376570 ITIH6Q6UXX5 1313 aa12.61□□□□□ -0.39
DDR1-227ENST00000376570 PARP4Q9UKK3 1724 aaKnown RBP12.6□□□□□ -0.39
DDR1-227ENST00000376570 FRMD3A2A2Y4 597 aa12.6□□□□□ -0.39
DDR1-227ENST00000376570 THAP12O43422 761 aa12.6□□□□□ -0.39
DDR1-227ENST00000376570 TLR2O60603 784 aa12.6□□□□□ -0.39
DDR1-227ENST00000376570 PIAS1O75925 651 aa12.6□□□□□ -0.39
DDR1-227ENST00000376570 DDNO94850 711 aaPredicted RBP12.6□□□□□ -0.39
DDR1-227ENST00000376570 TRAF1Q13077 416 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms