RNA–Protein interactions for RNA: ENST00000376545.7

ABCF1-202, Transcript of ATP binding cassette subfamily F member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ABCF1, Length 3,131 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF1-202ENST00000376545 DDX42Q86XP3 938 aaKnown RBP eCLIP11.59□□□□□ -0.55
ABCF1-202ENST00000376545 CCDC26Q8TAB7 109 aa11.59□□□□□ -0.55
ABCF1-202ENST00000376545 ATP8B4Q8TF62 1192 aa11.59□□□□□ -0.55
ABCF1-202ENST00000376545 AKT1S1Q96B36 256 aa11.59□□□□□ -0.55
ABCF1-202ENST00000376545 AMACRQ9UHK6 382 aa11.59□□□□□ -0.55
ABCF1-202ENST00000376545 TRPC5Q9UL62 973 aaPredicted RBP11.59□□□□□ -0.55
ABCF1-202ENST00000376545 PPP1R9AQ9ULJ8 1098 aa11.59□□□□□ -0.55
ABCF1-202ENST00000376545 TMX2Q9Y320 296 aa11.59□□□□□ -0.55
ABCF1-202ENST00000376545 NAA35Q5VZE5 725 aa11.59□□□□□ -0.55
ABCF1-202ENST00000376545 TMC3Q7Z5M5 1100 aa11.59□□□□□ -0.55
ABCF1-202ENST00000376545 COL23A1Q86Y22 540 aaPredicted RBP11.59□□□□□ -0.55
ABCF1-202ENST00000376545 GLYCTKQ8IVS8 523 aa11.59□□□□□ -0.55
ABCF1-202ENST00000376545 TPH2Q8IWU9 490 aa11.59□□□□□ -0.55
ABCF1-202ENST00000376545 C3orf20Q8ND61 904 aa11.59□□□□□ -0.55
ABCF1-202ENST00000376545 INTS2Q9H0H0 1204 aaKnown RBP11.59□□□□□ -0.55
ABCF1-202ENST00000376545 FAM114A2Q9NRY5 505 aa11.59□□□□□ -0.55
ABCF1-202ENST00000376545 HERC5Q9UII4 1024 aaKnown RBP11.59□□□□□ -0.55
ABCF1-202ENST00000376545 ANKRD62A6NC57 917 aa11.58□□□□□ -0.56
ABCF1-202ENST00000376545 MYO1FO00160 1098 aa11.58□□□□□ -0.56
ABCF1-202ENST00000376545 NDUFAB1O14561 156 aa11.58□□□□□ -0.56
ABCF1-202ENST00000376545 CCDC172P0C7W6 258 aa11.58□□□□□ -0.56
ABCF1-202ENST00000376545 PPP2R5EQ16537 467 aa11.58□□□□□ -0.56
ABCF1-202ENST00000376545 PHLDB3Q6NSJ2 640 aa11.58□□□□□ -0.56
ABCF1-202ENST00000376545 STXBP4Q6ZWJ1 553 aa11.58□□□□□ -0.56
ABCF1-202ENST00000376545 DAW1Q8N136 415 aa11.58□□□□□ -0.56
ABCF1-202ENST00000376545 TMCO5BA8MYB1 307 aa11.58□□□□□ -0.56
ABCF1-202ENST00000376545 GCOM1H8Y6P7 765 aaPredicted RBP11.58□□□□□ -0.56
ABCF1-202ENST00000376545 PPFIA2O75334 1257 aa11.58□□□□□ -0.56
ABCF1-202ENST00000376545 PAEPP09466 180 aa11.58□□□□□ -0.56
ABCF1-202ENST00000376545 MYZAPP0CAP1 466 aa11.58□□□□□ -0.56
ABCF1-202ENST00000376545 MAPTP10636 758 aaKnown RBP11.58□□□□□ -0.56
ABCF1-202ENST00000376545 BFSP1Q12934 665 aa11.58□□□□□ -0.56
ABCF1-202ENST00000376545 CEP55Q53EZ4 464 aa11.58□□□□□ -0.56
ABCF1-202ENST00000376545 C12orf56Q8IXR9 622 aa11.58□□□□□ -0.56
ABCF1-202ENST00000376545 ZNF473Q8WTR7 871 aaKnown RBP11.58□□□□□ -0.56
ABCF1-202ENST00000376545 WDR11Q9BZH6 1224 aa11.58□□□□□ -0.56
ABCF1-202ENST00000376545 UNC45AQ9H3U1 944 aa11.58□□□□□ -0.56
ABCF1-202ENST00000376545 TTI1O43156 1089 aa11.58□□□□□ -0.56
ABCF1-202ENST00000376545 DAPK3O43293 454 aa11.58□□□□□ -0.56
ABCF1-202ENST00000376545 POLR2MP0CAP2 368 aa11.58□□□□□ -0.56
ABCF1-202ENST00000376545 DRG2P55039 364 aaKnown RBP11.58□□□□□ -0.56
ABCF1-202ENST00000376545 SETQ01105 290 aaPredicted RBP11.58□□□□□ -0.56
ABCF1-202ENST00000376545 HLTFQ14527 1009 aaKnown RBP eCLIP11.58□□□□□ -0.565e-6■□□□□ 8.8
ABCF1-202ENST00000376545 CLUL1Q15846 466 aa11.58□□□□□ -0.56
ABCF1-202ENST00000376545 DUPD1Q68J44 220 aa11.58□□□□□ -0.56
ABCF1-202ENST00000376545 C6orf89Q6UWU4 347 aa11.58□□□□□ -0.56
ABCF1-202ENST00000376545 SLC30A10Q6XR72 485 aa11.58□□□□□ -0.56
ABCF1-202ENST00000376545 RUFY4Q6ZNE9 571 aa11.58□□□□□ -0.56
ABCF1-202ENST00000376545 KSR1Q8IVT5 923 aa11.58□□□□□ -0.56
ABCF1-202ENST00000376545 FAM178BQ8IXR5 827 aa11.58□□□□□ -0.56
ABCF1-202ENST00000376545 ARFGAP2Q8N6H7 521 aa11.58□□□□□ -0.56
ABCF1-202ENST00000376545 VTI1AQ96AJ9 217 aa11.58□□□□□ -0.56
ABCF1-202ENST00000376545 ARHGEF26Q96DR7 871 aa11.58□□□□□ -0.56
ABCF1-202ENST00000376545 TMX4Q9H1E5 349 aaPredicted RBP11.58□□□□□ -0.56
ABCF1-202ENST00000376545 TDRD3Q9H7E2 651 aaKnown RBP11.58□□□□□ -0.56
ABCF1-202ENST00000376545 ZDHHC18Q9NUE0 388 aa11.58□□□□□ -0.56
ABCF1-202ENST00000376545 COG5Q9UP83 839 aa11.58□□□□□ -0.56
ABCF1-202ENST00000376545 FRMD4BQ9Y2L6 1034 aa11.58□□□□□ -0.56
ABCF1-202ENST00000376545 PMM2O15305 246 aa11.57□□□□□ -0.56
ABCF1-202ENST00000376545 P4HA2O15460 535 aa11.57□□□□□ -0.56
ABCF1-202ENST00000376545 FAM107AO95990 144 aa11.57□□□□□ -0.56
ABCF1-202ENST00000376545 ECE1P42892 770 aa11.57□□□□□ -0.56
ABCF1-202ENST00000376545 RBM5P52756 815 aaKnown RBP eCLIP11.57□□□□□ -0.566e-7■■□□□ 11.4
ABCF1-202ENST00000376545 IKQ13123 557 aaPredicted RBP11.57□□□□□ -0.56
ABCF1-202ENST00000376545 HS2ST1Q7LGA3 356 aa11.57□□□□□ -0.56
ABCF1-202ENST00000376545 NLRP14Q86W24 1093 aa11.57□□□□□ -0.56
ABCF1-202ENST00000376545 MYCBPAPQ8TBZ2 947 aa11.57□□□□□ -0.56
ABCF1-202ENST00000376545 CCT8L2Q96SF2 557 aa11.57□□□□□ -0.56
ABCF1-202ENST00000376545 NR2E1Q9Y466 385 aa11.57□□□□□ -0.56
ABCF1-202ENST00000376545 SAMM50Q9Y512 469 aa11.57□□□□□ -0.56
ABCF1-202ENST00000376545 MEFVO15553 781 aaPredicted RBP11.57□□□□□ -0.56
ABCF1-202ENST00000376545 GAS7O60861 476 aa11.57□□□□□ -0.56
ABCF1-202ENST00000376545 TRIM37O94972 964 aa11.57□□□□□ -0.56
ABCF1-202ENST00000376545 FGGP02679 453 aa11.57□□□□□ -0.56
ABCF1-202ENST00000376545 VCAM1P19320 739 aa11.57□□□□□ -0.56
ABCF1-202ENST00000376545 CTNNA1P35221 906 aaKnown RBP11.57□□□□□ -0.56
ABCF1-202ENST00000376545 FNTAP49354 379 aa11.57□□□□□ -0.56
ABCF1-202ENST00000376545 STYK1Q6J9G0 422 aa11.57□□□□□ -0.56
ABCF1-202ENST00000376545 C11orf63Q6NUN7 778 aa11.57□□□□□ -0.56
ABCF1-202ENST00000376545 SAMD1Q6SPF0 538 aaPredicted RBP11.57□□□□□ -0.56
ABCF1-202ENST00000376545 NEK9Q8TD19 979 aa11.57□□□□□ -0.56
ABCF1-202ENST00000376545 CTNNBL1Q8WYA6 563 aaPredicted RBP11.57□□□□□ -0.56
ABCF1-202ENST00000376545 RIT2Q99578 217 aa11.57□□□□□ -0.56
ABCF1-202ENST00000376545 SLTMQ9NWH9 1034 aaKnown RBP eCLIP11.57□□□□□ -0.56
ABCF1-202ENST00000376545 TAS2R14Q9NYV8 317 aa11.57□□□□□ -0.56
ABCF1-202ENST00000376545 ZNF536O15090 1300 aa11.57□□□□□ -0.56
ABCF1-202ENST00000376545 MAPK13O15264 365 aa11.56□□□□□ -0.56
ABCF1-202ENST00000376545 FSBPO95073 299 aa11.56□□□□□ -0.56
ABCF1-202ENST00000376545 ARP10275 920 aa11.56□□□□□ -0.56
ABCF1-202ENST00000376545 BCRP11274 1271 aa11.56□□□□□ -0.56
ABCF1-202ENST00000376545 MYL7Q01449 175 aa11.56□□□□□ -0.56
ABCF1-202ENST00000376545 PTPROQ16827 1216 aa11.56□□□□□ -0.56
ABCF1-202ENST00000376545 PALB2Q86YC2 1186 aa11.56□□□□□ -0.56
ABCF1-202ENST00000376545 PROCA1Q8NCQ7 364 aaPredicted RBP11.56□□□□□ -0.56
ABCF1-202ENST00000376545 OR2W6PQ8NHA6 318 aa11.56□□□□□ -0.56
ABCF1-202ENST00000376545 PRMT6Q96LA8 375 aaPredicted RBP11.56□□□□□ -0.56
ABCF1-202ENST00000376545 AGPAT1Q99943 283 aa11.56□□□□□ -0.56
ABCF1-202ENST00000376545 THAP2Q9H0W7 228 aa11.56□□□□□ -0.56
ABCF1-202ENST00000376545 UTP11Q9Y3A2 253 aaKnown RBP11.56□□□□□ -0.56
ABCF1-202ENST00000376545 FAM187AA6NFU0 413 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms