RNA–Protein interactions for RNA: ENST00000376395.8

UBQLN1-202, Transcript of ubiquilin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBQLN1, Length 4,118 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN1-202ENST00000376395 ACTR5Q9H9F9 607 aaPredicted RBP15.93■□□□□ 0.14
UBQLN1-202ENST00000376395 SLC40A1Q9NP59 571 aa15.93■□□□□ 0.14
UBQLN1-202ENST00000376395 C1orf112Q9NSG2 853 aa15.93■□□□□ 0.14
UBQLN1-202ENST00000376395 CCPG1Q9ULG6 757 aa15.93■□□□□ 0.14
UBQLN1-202ENST00000376395 ALG6Q9Y672 507 aa15.93■□□□□ 0.14
UBQLN1-202ENST00000376395 RASSF10A6NK89 507 aa15.93■□□□□ 0.14
UBQLN1-202ENST00000376395 EIF3BP55884 814 aaKnown RBP15.93■□□□□ 0.14
UBQLN1-202ENST00000376395 TRAF3IP1Q8TDR0 691 aaPredicted RBP15.93■□□□□ 0.14
UBQLN1-202ENST00000376395 NT5C1BQ96P26 610 aa15.93■□□□□ 0.14
UBQLN1-202ENST00000376395 MYH8P13535 1937 aa15.93■□□□□ 0.14
UBQLN1-202ENST00000376395 MYH2Q9UKX2 1941 aa15.93■□□□□ 0.14
UBQLN1-202ENST00000376395 PDXKO00764 312 aa15.92■□□□□ 0.14
UBQLN1-202ENST00000376395 HIP1RO75146 1068 aa15.92■□□□□ 0.14
UBQLN1-202ENST00000376395 NSFP46459 744 aaKnown RBP15.92■□□□□ 0.14
UBQLN1-202ENST00000376395 FMO5P49326 533 aa15.92■□□□□ 0.14
UBQLN1-202ENST00000376395 ERFP50548 548 aa15.92■□□□□ 0.14
UBQLN1-202ENST00000376395 DYNLT1P63172 113 aa15.92■□□□□ 0.14
UBQLN1-202ENST00000376395 KIAA1755Q5JYT7 1200 aa15.92■□□□□ 0.14
UBQLN1-202ENST00000376395 FYB2Q5VWT5 728 aa15.92■□□□□ 0.14
UBQLN1-202ENST00000376395 MCUR1Q96AQ8 359 aa15.92■□□□□ 0.14
UBQLN1-202ENST00000376395 TTYH3Q9C0H2 523 aa15.92■□□□□ 0.14
UBQLN1-202ENST00000376395 POLLQ9UGP5 575 aa15.92■□□□□ 0.14
UBQLN1-202ENST00000376395 ABCB11O95342 1321 aa15.92■□□□□ 0.14
UBQLN1-202ENST00000376395 TRIM37O94972 964 aa15.92■□□□□ 0.14
UBQLN1-202ENST00000376395 PPP4CP60510 307 aa15.92■□□□□ 0.14
UBQLN1-202ENST00000376395 STRN3Q13033 797 aa15.92■□□□□ 0.14
UBQLN1-202ENST00000376395 SEMA3FQ13275 785 aa15.92■□□□□ 0.14
UBQLN1-202ENST00000376395 PARP9Q8IXQ6 854 aa15.92■□□□□ 0.14
UBQLN1-202ENST00000376395 ANAPC5Q9UJX4 755 aa15.92■□□□□ 0.14
UBQLN1-202ENST00000376395 MRPL11Q9Y3B7 192 aaKnown RBP15.92■□□□□ 0.14
UBQLN1-202ENST00000376395 SPATA31A1Q5TZJ5 1347 aa15.92■□□□□ 0.14
UBQLN1-202ENST00000376395 H0Y3Z8 333 aa15.92■□□□□ 0.14
UBQLN1-202ENST00000376395 FOXN3O00409 490 aaPredicted RBP15.92■□□□□ 0.14
UBQLN1-202ENST00000376395 SHROOM1Q2M3G4 852 aaPredicted RBP15.92■□□□□ 0.14
UBQLN1-202ENST00000376395 JAMLQ86YT9 394 aa15.92■□□□□ 0.14
UBQLN1-202ENST00000376395 HAS1Q92839 578 aa15.92■□□□□ 0.14
UBQLN1-202ENST00000376395 STMN2Q93045 179 aa15.92■□□□□ 0.14
UBQLN1-202ENST00000376395 NUP85Q9BW27 656 aa15.92■□□□□ 0.14
UBQLN1-202ENST00000376395 FLT3P36888 993 aa15.92■□□□□ 0.14
UBQLN1-202ENST00000376395 GIT2Q14161 759 aa15.92■□□□□ 0.14
UBQLN1-202ENST00000376395 CDC42EP5Q6NZY7 148 aa15.92■□□□□ 0.14
UBQLN1-202ENST00000376395 CTAGE3PQ8IX95 158 aa15.92■□□□□ 0.14
UBQLN1-202ENST00000376395 CAVIN3Q969G5 261 aa15.92■□□□□ 0.14
UBQLN1-202ENST00000376395 MTMR9Q96QG7 549 aa15.92■□□□□ 0.14
UBQLN1-202ENST00000376395 SLITRK6Q9H5Y7 841 aa15.92■□□□□ 0.14
UBQLN1-202ENST00000376395 CNOT8Q9UFF9 292 aaKnown RBP15.92■□□□□ 0.14
UBQLN1-202ENST00000376395 PPP1R9AQ9ULJ8 1098 aa15.92■□□□□ 0.14
UBQLN1-202ENST00000376395 CLDN3O15551 220 aa15.91■□□□□ 0.14
UBQLN1-202ENST00000376395 NDUFB10O96000 172 aa15.91■□□□□ 0.14
UBQLN1-202ENST00000376395 GPC5P78333 572 aa15.91■□□□□ 0.14
UBQLN1-202ENST00000376395 DLGAP5Q15398 846 aa15.91■□□□□ 0.14
UBQLN1-202ENST00000376395 PADI6Q6TGC4 694 aa15.91■□□□□ 0.14
UBQLN1-202ENST00000376395 VPS52Q8N1B4 723 aa15.91■□□□□ 0.14
UBQLN1-202ENST00000376395 SMC6Q96SB8 1091 aa15.91■□□□□ 0.14
UBQLN1-202ENST00000376395 BCAS3Q9H6U6 928 aa15.91■□□□□ 0.14
UBQLN1-202ENST00000376395 RIOX1Q9H6W3 641 aa15.91■□□□□ 0.14
UBQLN1-202ENST00000376395 TMBIM4Q9HC24 238 aa15.91■□□□□ 0.14
UBQLN1-202ENST00000376395 ACP6Q9NPH0 428 aa15.91■□□□□ 0.14
UBQLN1-202ENST00000376395 DDX4Q9NQI0 724 aaKnown RBP15.91■□□□□ 0.14
UBQLN1-202ENST00000376395 KLHL11Q9NVR0 708 aa15.91■□□□□ 0.14
UBQLN1-202ENST00000376395 ANKFY1Q9P2R3 1169 aa15.91■□□□□ 0.14
UBQLN1-202ENST00000376395 ABCC6O95255 1503 aa15.91■□□□□ 0.14
UBQLN1-202ENST00000376395 PPIP5K2O43314 1243 aa15.91■□□□□ 0.14
UBQLN1-202ENST00000376395 GCKP35557 465 aa15.91■□□□□ 0.14
UBQLN1-202ENST00000376395 MFAP3P55082 362 aa15.91■□□□□ 0.14
UBQLN1-202ENST00000376395 PRKG1Q13976 671 aa15.91■□□□□ 0.14
UBQLN1-202ENST00000376395 ZNF394Q53GI3 561 aa15.91■□□□□ 0.14
UBQLN1-202ENST00000376395 NLRX1Q86UT6 975 aa15.91■□□□□ 0.14
UBQLN1-202ENST00000376395 EPS8L3Q8TE67 593 aaKnown RBP15.91■□□□□ 0.14
UBQLN1-202ENST00000376395 LXNQ9BS40 222 aa15.91■□□□□ 0.14
UBQLN1-202ENST00000376395 TCP11X1B4DZS4 312 aa15.91■□□□□ 0.14
UBQLN1-202ENST00000376395 GOLGA8SH3BPF8 625 aa15.91■□□□□ 0.14
UBQLN1-202ENST00000376395 GOLGA8MH3BSY2 632 aa15.91■□□□□ 0.14
UBQLN1-202ENST00000376395 RAD17O75943 681 aa15.91■□□□□ 0.14
UBQLN1-202ENST00000376395 EDRF1Q3B7T1 1238 aa15.91■□□□□ 0.14
UBQLN1-202ENST00000376395 C6orf118Q5T5N4 469 aa15.91■□□□□ 0.14
UBQLN1-202ENST00000376395 PPP1R21Q6ZMI0 780 aa15.91■□□□□ 0.14
UBQLN1-202ENST00000376395 DNAJC19Q96DA6 116 aa15.91■□□□□ 0.14
UBQLN1-202ENST00000376395 XPO6Q96QU8 1125 aaKnown RBP15.91■□□□□ 0.14
UBQLN1-202ENST00000376395 SLC24A3Q9HC58 644 aa15.91■□□□□ 0.14
UBQLN1-202ENST00000376395 ATP2A2P16615 1042 aaKnown RBP15.9■□□□□ 0.14
UBQLN1-202ENST00000376395 ZNF844Q08AG5 666 aa15.9■□□□□ 0.14
UBQLN1-202ENST00000376395 PAXIP1Q6ZW49 1069 aaPredicted RBP15.9■□□□□ 0.14
UBQLN1-202ENST00000376395 ARMC9Q7Z3E5 817 aa15.9■□□□□ 0.14
UBQLN1-202ENST00000376395 RNF25Q96BH1 459 aaPredicted RBP15.9■□□□□ 0.14
UBQLN1-202ENST00000376395 C9orf72Q96LT7 481 aa15.9■□□□□ 0.14
UBQLN1-202ENST00000376395 LMO7Q8WWI1 1683 aa15.9■□□□□ 0.14
UBQLN1-202ENST00000376395 SLIT3O75094 1523 aa15.9■□□□□ 0.14
UBQLN1-202ENST00000376395 COMTP21964 271 aa15.9■□□□□ 0.14
UBQLN1-202ENST00000376395 RNF207Q6ZRF8 634 aa15.9■□□□□ 0.14
UBQLN1-202ENST00000376395 ZNF564Q8TBZ8 553 aaPredicted RBP15.9■□□□□ 0.14
UBQLN1-202ENST00000376395 SLC20A1Q8WUM9 679 aa15.9■□□□□ 0.14
UBQLN1-202ENST00000376395 ESYT2A0FGR8 921 aa15.9■□□□□ 0.14
UBQLN1-202ENST00000376395 SPAG7O75391 227 aa15.9■□□□□ 0.14
UBQLN1-202ENST00000376395 BRAFP15056 766 aa15.9■□□□□ 0.14
UBQLN1-202ENST00000376395 RWDD2BP57060 319 aa15.9■□□□□ 0.14
UBQLN1-202ENST00000376395 ANKRD20A3Q5VUR7 823 aa15.9■□□□□ 0.14
UBQLN1-202ENST00000376395 RHOT2Q8IXI1 618 aa15.9■□□□□ 0.14
UBQLN1-202ENST00000376395 CCDC89Q8N998 374 aa15.9■□□□□ 0.14
UBQLN1-202ENST00000376395 DDX3XO00571 662 aaKnown RBP eCLIP15.89■□□□□ 0.135e-9■■■□□ 16.9
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms