RNA–Protein interactions for RNA: ENST00000375755.7

MSH5-204, Transcript of mutS homolog 5, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene MSH5, Length 3,094 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-204ENST00000375755 KCNMB3Q9NPA1 279 aa14.01□□□□□ -0.17
MSH5-204ENST00000375755 LUC7LQ9NQ29 371 aaKnown RBP14.01□□□□□ -0.17
MSH5-204ENST00000375755 TMOD2Q9NZR1 351 aa14.01□□□□□ -0.17
MSH5-204ENST00000375755 ADAMTS1Q9UHI8 967 aa14.01□□□□□ -0.17
MSH5-204ENST00000375755 AMACRQ9UHK6 382 aa14.01□□□□□ -0.17
MSH5-204ENST00000375755 HDAC9Q9UKV0 1011 aa14.01□□□□□ -0.17
MSH5-204ENST00000375755 CAND2O75155 1236 aa14.01□□□□□ -0.17
MSH5-204ENST00000375755 ITGA4P13612 1032 aa14.01□□□□□ -0.17
MSH5-204ENST00000375755 CHN1P15882 459 aa14.01□□□□□ -0.17
MSH5-204ENST00000375755 HOXA13P31271 388 aaPredicted RBP14.01□□□□□ -0.17
MSH5-204ENST00000375755 ECM1Q16610 540 aa14.01□□□□□ -0.17
MSH5-204ENST00000375755 SAMD7Q7Z3H4 446 aa14.01□□□□□ -0.17
MSH5-204ENST00000375755 PIGWQ7Z7B1 504 aa14.01□□□□□ -0.17
MSH5-204ENST00000375755 DCAF4Q8WV16 495 aa14.01□□□□□ -0.17
MSH5-204ENST00000375755 CENPTQ96BT3 561 aa14.01□□□□□ -0.17
MSH5-204ENST00000375755 CEP72Q9P209 647 aa14.01□□□□□ -0.17
MSH5-204ENST00000375755 FER1L6Q2WGJ9 1857 aa14.01□□□□□ -0.17
MSH5-204ENST00000375755 POLR2FP61218 127 aaKnown RBP14.01□□□□□ -0.17
MSH5-204ENST00000375755 SLC30A10Q6XR72 485 aa14.01□□□□□ -0.17
MSH5-204ENST00000375755 LRRC34Q8IZ02 419 aa14.01□□□□□ -0.17
MSH5-204ENST00000375755 ANKS4BQ8N8V4 417 aa14.01□□□□□ -0.17
MSH5-204ENST00000375755 CALR3Q96L12 384 aaKnown RBP14.01□□□□□ -0.17
MSH5-204ENST00000375755 MTFR1LQ9H019 292 aa14.01□□□□□ -0.17
MSH5-204ENST00000375755 TAOK3Q9H2K8 898 aa14.01□□□□□ -0.17
MSH5-204ENST00000375755 ABCB11O95342 1321 aa14□□□□□ -0.17
MSH5-204ENST00000375755 CES2O00748 559 aa14□□□□□ -0.17
MSH5-204ENST00000375755 MEIS2O14770 477 aa14□□□□□ -0.17
MSH5-204ENST00000375755 MMEP08473 750 aa14□□□□□ -0.17
MSH5-204ENST00000375755 USP11P51784 963 aa14□□□□□ -0.17
MSH5-204ENST00000375755 ACTRT1Q8TDG2 376 aa14□□□□□ -0.17
MSH5-204ENST00000375755 HAS1Q92839 578 aa14□□□□□ -0.17
MSH5-204ENST00000375755 MYOZ2Q9NPC6 264 aa14□□□□□ -0.17
MSH5-204ENST00000375755 NOC2LQ9Y3T9 749 aaKnown RBP14□□□□□ -0.17
MSH5-204ENST00000375755 TTI1O43156 1089 aa14□□□□□ -0.17
MSH5-204ENST00000375755 DIAPH2O60879 1101 aa14□□□□□ -0.17
MSH5-204ENST00000375755 BMP3P12645 472 aa14□□□□□ -0.17
MSH5-204ENST00000375755 KCNJ2P63252 427 aa14□□□□□ -0.17
MSH5-204ENST00000375755 ZNF268Q14587 947 aaPredicted RBP14□□□□□ -0.17
MSH5-204ENST00000375755 ITIH4Q14624 930 aa14□□□□□ -0.17
MSH5-204ENST00000375755 DNAAF5Q86Y56 855 aa14□□□□□ -0.17
MSH5-204ENST00000375755 GLIS3Q8NEA6 775 aa14□□□□□ -0.17
MSH5-204ENST00000375755 NLGN2Q8NFZ4 835 aa14□□□□□ -0.17
MSH5-204ENST00000375755 ATXN2LQ8WWM7 1075 aaKnown RBP14□□□□□ -0.17
MSH5-204ENST00000375755 SYN2Q92777 582 aaPredicted RBP14□□□□□ -0.17
MSH5-204ENST00000375755 PBKQ96KB5 322 aa14□□□□□ -0.17
MSH5-204ENST00000375755 ELAC2Q9BQ52 826 aaKnown RBP14□□□□□ -0.17
MSH5-204ENST00000375755 LSM14BQ9BX40 385 aaKnown RBP14□□□□□ -0.17
MSH5-204ENST00000375755 CELF4Q9BZC1 486 aaKnown RBP14□□□□□ -0.17
MSH5-204ENST00000375755 DPH5Q9H2P9 285 aa14□□□□□ -0.17
MSH5-204ENST00000375755 ABCF3Q9NUQ8 709 aa14□□□□□ -0.17
MSH5-204ENST00000375755 ZBTB21Q9ULJ3 1066 aa14□□□□□ -0.17
MSH5-204ENST00000375755 ASAP2O43150 1006 aa13.99□□□□□ -0.17
MSH5-204ENST00000375755 SMNDC1O75940 238 aaKnown RBP eCLIP13.99□□□□□ -0.171e-8■■□□□ 12
MSH5-204ENST00000375755 ZBTB48P10074 688 aaPredicted RBP13.99□□□□□ -0.17
MSH5-204ENST00000375755 PRPHP41219 470 aa13.99□□□□□ -0.17
MSH5-204ENST00000375755 CIAPIN1Q6FI81 312 aa13.99□□□□□ -0.17
MSH5-204ENST00000375755 CAPRIN2Q6IMN6 1127 aaKnown RBP13.99□□□□□ -0.17
MSH5-204ENST00000375755 KCNK18Q7Z418 384 aa13.99□□□□□ -0.17
MSH5-204ENST00000375755 METTL13Q8N6R0 699 aa13.99□□□□□ -0.17
MSH5-204ENST00000375755 CCHCR1Q8TD31 782 aa13.99□□□□□ -0.17
MSH5-204ENST00000375755 ADAM7Q9H2U9 754 aa13.99□□□□□ -0.17
MSH5-204ENST00000375755 SPATS2LQ9NUQ6 558 aaKnown RBP13.99□□□□□ -0.17
MSH5-204ENST00000375755 FBXO28Q9NVF7 368 aa13.99□□□□□ -0.17
MSH5-204ENST00000375755 NOP53Q9NZM5 478 aaKnown RBP13.99□□□□□ -0.17
MSH5-204ENST00000375755 PGAP2Q9UHJ9 254 aa13.99□□□□□ -0.17
MSH5-204ENST00000375755 CFAP73A6NFT4 308 aa13.99□□□□□ -0.17
MSH5-204ENST00000375755 PGRMC1O00264 195 aaKnown RBP13.99□□□□□ -0.17
MSH5-204ENST00000375755 KRIT1O00522 736 aa13.99□□□□□ -0.17
MSH5-204ENST00000375755 SHBGP04278 402 aa13.99□□□□□ -0.17
MSH5-204ENST00000375755 TGFB2P61812 414 aa13.99□□□□□ -0.17
MSH5-204ENST00000375755 RAPGEF1Q13905 1077 aa13.99□□□□□ -0.17
MSH5-204ENST00000375755 SYDE2Q5VT97 1194 aa13.99□□□□□ -0.17
MSH5-204ENST00000375755 PRAMEF18Q5VWM3 479 aa13.99□□□□□ -0.17
MSH5-204ENST00000375755 MIS18BP1Q6P0N0 1132 aa13.99□□□□□ -0.17
MSH5-204ENST00000375755 TRPM8Q7Z2W7 1104 aa13.99□□□□□ -0.17
MSH5-204ENST00000375755 GMCL1P1Q8NEA9 526 aa13.99□□□□□ -0.17
MSH5-204ENST00000375755 SELENOSQ9BQE4 189 aa13.99□□□□□ -0.17
MSH5-204ENST00000375755 DDX25Q9UHL0 483 aaKnown RBP13.99□□□□□ -0.17
MSH5-204ENST00000375755 PRR12Q9ULL5 1215 aa13.99□□□□□ -0.17
MSH5-204ENST00000375755 ATP8A1Q9Y2Q0 1164 aa13.99□□□□□ -0.17
MSH5-204ENST00000375755 GJA3Q9Y6H8 435 aa13.99□□□□□ -0.17
MSH5-204ENST00000375755 MYMKA6NI61 221 aa13.99□□□□□ -0.17
MSH5-204ENST00000375755 hCG_1984214I3L0E3 225 aa13.99□□□□□ -0.17
MSH5-204ENST00000375755 FGFR1OPO95684 399 aaKnown RBP13.99□□□□□ -0.17
MSH5-204ENST00000375755 ALADP13716 330 aa13.99□□□□□ -0.17
MSH5-204ENST00000375755 AMPD3Q01432 767 aa13.99□□□□□ -0.17
MSH5-204ENST00000375755 GRB10Q13322 594 aa13.99□□□□□ -0.17
MSH5-204ENST00000375755 LRRC41Q15345 812 aa13.99□□□□□ -0.17
MSH5-204ENST00000375755 TBC1D10BQ4KMP7 808 aaPredicted RBP13.99□□□□□ -0.17
MSH5-204ENST00000375755 CCDC174Q6PII3 467 aa13.99□□□□□ -0.17
MSH5-204ENST00000375755 DYMQ7RTS9 669 aa13.99□□□□□ -0.17
MSH5-204ENST00000375755 ZNF713Q8N859 430 aaPredicted RBP13.99□□□□□ -0.17
MSH5-204ENST00000375755 FAM133AQ8N9E0 248 aa13.99□□□□□ -0.17
MSH5-204ENST00000375755 PRCCQ92733 491 aaPredicted RBP13.99□□□□□ -0.17
MSH5-204ENST00000375755 PNMA5Q96PV4 448 aa13.99□□□□□ -0.17
MSH5-204ENST00000375755 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.99□□□□□ -0.171e-7■■□□□ 13.4
MSH5-204ENST00000375755 WDR3Q9UNX4 943 aaKnown RBP eCLIP13.99□□□□□ -0.17
MSH5-204ENST00000375755 ENO4A6NNW6 628 aa13.98□□□□□ -0.17
MSH5-204ENST00000375755 LAD1O00515 517 aa13.98□□□□□ -0.17
MSH5-204ENST00000375755 NQO1P15559 274 aaKnown RBP13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms