RNA–Protein interactions for RNA: ENST00000375740.7

MSH5-202, Transcript of mutS homolog 5, humanhuman

TSL 1 (best) BASIC

Gene MSH5, Length 2,669 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-202ENST00000375740 CXCR5P32302 372 aa15.22■□□□□ 0.03
MSH5-202ENST00000375740 QARSP47897 775 aaKnown RBP15.22■□□□□ 0.03
MSH5-202ENST00000375740 C2orf54Q08AI8 447 aa15.22■□□□□ 0.03
MSH5-202ENST00000375740 KIAA0753Q2KHM9 967 aa15.22■□□□□ 0.03
MSH5-202ENST00000375740 NSMFQ6X4W1 530 aa15.22■□□□□ 0.03
MSH5-202ENST00000375740 SYCP3Q8IZU3 236 aa15.22■□□□□ 0.03
MSH5-202ENST00000375740 ATG4CQ96DT6 458 aa15.22■□□□□ 0.03
MSH5-202ENST00000375740 RMDN3Q96TC7 470 aa15.22■□□□□ 0.03
MSH5-202ENST00000375740 SH2D3AQ9BRG2 576 aa15.22■□□□□ 0.03
MSH5-202ENST00000375740 TBC1D22BQ9NU19 505 aa15.22■□□□□ 0.03
MSH5-202ENST00000375740 FZD1Q9UP38 647 aa15.22■□□□□ 0.03
MSH5-202ENST00000375740 RIPK3Q9Y572 518 aa15.22■□□□□ 0.03
MSH5-202ENST00000375740 PPP1R37O75864 691 aa15.21■□□□□ 0.03
MSH5-202ENST00000375740 RARRES1P49788 294 aa15.21■□□□□ 0.03
MSH5-202ENST00000375740 IQCEQ6IPM2 695 aa15.21■□□□□ 0.03
MSH5-202ENST00000375740 SAMD3Q8N6K7 520 aa15.21■□□□□ 0.03
MSH5-202ENST00000375740 FAM76AQ8TAV0 307 aa15.21■□□□□ 0.03
MSH5-202ENST00000375740 JPH2Q9BR39 696 aaPredicted RBP15.21■□□□□ 0.03
MSH5-202ENST00000375740 PDCD2LQ9BRP1 358 aa15.21■□□□□ 0.03
MSH5-202ENST00000375740 TLR10Q9BXR5 811 aa15.21■□□□□ 0.03
MSH5-202ENST00000375740 DBR1Q9UK59 544 aaKnown RBP15.21■□□□□ 0.03
MSH5-202ENST00000375740 FBXL5Q9UKA1 691 aa15.21■□□□□ 0.03
MSH5-202ENST00000375740 FRMD4BQ9Y2L6 1034 aa15.21■□□□□ 0.03
MSH5-202ENST00000375740 HYOU1Q9Y4L1 999 aa15.21■□□□□ 0.03
MSH5-202ENST00000375740 BZW2Q9Y6E2 419 aaKnown RBP15.21■□□□□ 0.03
MSH5-202ENST00000375740 GRIN2DO15399 1336 aa15.21■□□□□ 0.03
MSH5-202ENST00000375740 FZD9O00144 591 aa15.21■□□□□ 0.03
MSH5-202ENST00000375740 TCP1P17987 556 aaKnown RBP15.21■□□□□ 0.03
MSH5-202ENST00000375740 BACE1P56817 501 aa15.21■□□□□ 0.03
MSH5-202ENST00000375740 JAM2P57087 298 aa15.21■□□□□ 0.03
MSH5-202ENST00000375740 TRMT1LQ7Z2T5 733 aaKnown RBP15.21■□□□□ 0.03
MSH5-202ENST00000375740 SCYL3Q8IZE3 742 aa15.21■□□□□ 0.03
MSH5-202ENST00000375740 SELENOOQ9BVL4 669 aa15.21■□□□□ 0.03
MSH5-202ENST00000375740 MTFR1LQ9H019 292 aa15.21■□□□□ 0.03
MSH5-202ENST00000375740 PXMP2Q9NR77 195 aa15.21■□□□□ 0.03
MSH5-202ENST00000375740 DONSONQ9NYP3 566 aa15.21■□□□□ 0.03
MSH5-202ENST00000375740 TMEM150BA6NC51 233 aa15.2■□□□□ 0.02
MSH5-202ENST00000375740 GOLGA6CA6NDK9 693 aa15.2■□□□□ 0.02
MSH5-202ENST00000375740 K7ENM7 598 aa15.2■□□□□ 0.02
MSH5-202ENST00000375740 PALMO75781 387 aa15.2■□□□□ 0.02
MSH5-202ENST00000375740 GOLGA6DP0CG33 693 aa15.2■□□□□ 0.02
MSH5-202ENST00000375740 FMO5P49326 533 aa15.2■□□□□ 0.02
MSH5-202ENST00000375740 MRPS25P82663 173 aaKnown RBP15.2■□□□□ 0.02
MSH5-202ENST00000375740 ARHGEF16Q5VV41 709 aa15.2■□□□□ 0.02
MSH5-202ENST00000375740 DCAF15Q66K64 600 aa15.2■□□□□ 0.02
MSH5-202ENST00000375740 RDH13Q8NBN7 331 aa15.2■□□□□ 0.02
MSH5-202ENST00000375740 GOLGA6AQ9NYA3 693 aa15.2■□□□□ 0.02
MSH5-202ENST00000375740 CAPN7Q9Y6W3 813 aa15.2■□□□□ 0.02
MSH5-202ENST00000375740 PRKCIP41743 596 aa15.2■□□□□ 0.02
MSH5-202ENST00000375740 BAATQ14032 418 aaPredicted RBP15.2■□□□□ 0.02
MSH5-202ENST00000375740 UGCGQ16739 394 aa15.2■□□□□ 0.02
MSH5-202ENST00000375740 LARSQ9P2J5 1176 aaKnown RBP15.2■□□□□ 0.02
MSH5-202ENST00000375740 ZNF112Q9UJU3 913 aa15.2■□□□□ 0.02
MSH5-202ENST00000375740 EXOC3O60645 756 aa15.2■□□□□ 0.02
MSH5-202ENST00000375740 LYPLA2O95372 231 aa15.2■□□□□ 0.02
MSH5-202ENST00000375740 TRIM49P0CI25 452 aa15.2■□□□□ 0.02
MSH5-202ENST00000375740 TRIM49CP0CI26 452 aa15.2■□□□□ 0.02
MSH5-202ENST00000375740 PTPRAP18433 802 aa15.2■□□□□ 0.02
MSH5-202ENST00000375740 YWHABP31946 246 aaKnown RBP15.2■□□□□ 0.02
MSH5-202ENST00000375740 GNGT1P63211 74 aa15.2■□□□□ 0.02
MSH5-202ENST00000375740 CBWD6Q4V339 395 aa15.2■□□□□ 0.02
MSH5-202ENST00000375740 CBWD3Q5JTY5 395 aa15.2■□□□□ 0.02
MSH5-202ENST00000375740 CBWD5Q5RIA9 395 aa15.2■□□□□ 0.02
MSH5-202ENST00000375740 ZNF280CQ8ND82 737 aa15.2■□□□□ 0.02
MSH5-202ENST00000375740 WRNIP1Q96S55 665 aa15.2■□□□□ 0.02
MSH5-202ENST00000375740 RNF146Q9NTX7 359 aa15.2■□□□□ 0.02
MSH5-202ENST00000375740 SMARCAL1Q9NZC9 954 aa15.2■□□□□ 0.02
MSH5-202ENST00000375740 EHD2Q9NZN4 543 aa15.2■□□□□ 0.02
MSH5-202ENST00000375740 PNMA2Q9UL42 364 aa15.2■□□□□ 0.02
MSH5-202ENST00000375740 TARSL2A2RTX5 802 aaKnown RBP15.19■□□□□ 0.02
MSH5-202ENST00000375740 TESPA1A2RU30 521 aaPredicted RBP15.19■□□□□ 0.02
MSH5-202ENST00000375740 FDX1P10109 184 aa15.19■□□□□ 0.02
MSH5-202ENST00000375740 C10orf76Q5T2E6 689 aa15.19■□□□□ 0.02
MSH5-202ENST00000375740 ANGEL2Q5VTE6 544 aaKnown RBP15.19■□□□□ 0.02
MSH5-202ENST00000375740 DNAAF5Q86Y56 855 aa15.19■□□□□ 0.02
MSH5-202ENST00000375740 SLC9A9Q8IVB4 645 aa15.19■□□□□ 0.02
MSH5-202ENST00000375740 CAPS2Q9BXY5 557 aa15.19■□□□□ 0.02
MSH5-202ENST00000375740 AS3MTQ9HBK9 375 aa15.19■□□□□ 0.02
MSH5-202ENST00000375740 PICK1Q9NRD5 415 aa15.19■□□□□ 0.02
MSH5-202ENST00000375740 NAGPAQ9UK23 515 aa15.19■□□□□ 0.02
MSH5-202ENST00000375740 CCNE2O96020 404 aa15.19■□□□□ 0.02
MSH5-202ENST00000375740 PLS3P13797 630 aa15.19■□□□□ 0.02
MSH5-202ENST00000375740 ZNF572Q7Z3I7 529 aaPredicted RBP15.19■□□□□ 0.02
MSH5-202ENST00000375740 MMGT1Q8N4V1 131 aa15.19■□□□□ 0.02
MSH5-202ENST00000375740 SPATA4Q8NEY3 305 aa15.19■□□□□ 0.02
MSH5-202ENST00000375740 PCIF1Q9H4Z3 704 aa15.19■□□□□ 0.02
MSH5-202ENST00000375740 CD248Q9HCU0 757 aa15.19■□□□□ 0.02
MSH5-202ENST00000375740 DOCK1Q14185 1865 aa15.18■□□□□ 0.02
MSH5-202ENST00000375740 TISP43B9A030 160 aa15.18■□□□□ 0.02
MSH5-202ENST00000375740 GFPT2O94808 682 aa15.18■□□□□ 0.02
MSH5-202ENST00000375740 FTCDO95954 541 aa15.18■□□□□ 0.02
MSH5-202ENST00000375740 MAPTP10636 758 aaKnown RBP15.18■□□□□ 0.02
MSH5-202ENST00000375740 PPP2R5AQ15172 486 aa15.18■□□□□ 0.02
MSH5-202ENST00000375740 C4orf19Q8IY42 314 aa15.18■□□□□ 0.02
MSH5-202ENST00000375740 PARP14Q460N5 1801 aa15.18■□□□□ 0.02
MSH5-202ENST00000375740 ZNF541Q9H0D2 1346 aa15.18■□□□□ 0.02
MSH5-202ENST00000375740 LTBP3Q9NS15 1303 aa15.18■□□□□ 0.02
MSH5-202ENST00000375740 BACH1O14867 736 aa15.18■□□□□ 0.02
MSH5-202ENST00000375740 EIF3HO15372 352 aaKnown RBP eCLIP15.18■□□□□ 0.02
MSH5-202ENST00000375740 MCM3P25205 808 aa15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms