RNA–Protein interactions for RNA: ENST00000375703.7

MSH5-201, Transcript of mutS homolog 5, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MSH5, Length 2,708 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-201ENST00000375703 KIF13BQ9NQT8 1826 aa15.79■□□□□ 0.12
MSH5-201ENST00000375703 FAM170AA1A519 330 aa15.78■□□□□ 0.12
MSH5-201ENST00000375703 E7EVH7 732 aa15.78■□□□□ 0.12
MSH5-201ENST00000375703 DDX3YO15523 660 aaKnown RBP15.78■□□□□ 0.12
MSH5-201ENST00000375703 ECE2O60344 883 aa15.78■□□□□ 0.12
MSH5-201ENST00000375703 DHX9Q08211 1270 aaKnown RBP15.78■□□□□ 0.12
MSH5-201ENST00000375703 PLS1Q14651 629 aa15.78■□□□□ 0.12
MSH5-201ENST00000375703 SYCP3Q8IZU3 236 aa15.78■□□□□ 0.12
MSH5-201ENST00000375703 MYCBPAPQ8TBZ2 947 aa15.78■□□□□ 0.12
MSH5-201ENST00000375703 SEC14L1Q92503 715 aa15.78■□□□□ 0.12
MSH5-201ENST00000375703 SYT11Q9BT88 431 aa15.78■□□□□ 0.12
MSH5-201ENST00000375703 PPANQ9NQ55 473 aaKnown RBP15.78■□□□□ 0.12
MSH5-201ENST00000375703 NR2E1Q9Y466 385 aa15.78■□□□□ 0.12
MSH5-201ENST00000375703 MYO1FO00160 1098 aa15.78■□□□□ 0.12
MSH5-201ENST00000375703 MEFVO15553 781 aaPredicted RBP15.78■□□□□ 0.12
MSH5-201ENST00000375703 EXOC3O60645 756 aa15.78■□□□□ 0.12
MSH5-201ENST00000375703 TRIM37O94972 964 aa15.78■□□□□ 0.12
MSH5-201ENST00000375703 ZNF131P52739 623 aa15.78■□□□□ 0.12
MSH5-201ENST00000375703 POU5F1Q01860 360 aaKnown RBP15.78■□□□□ 0.12
MSH5-201ENST00000375703 CCDC174Q6PII3 467 aa15.78■□□□□ 0.12
MSH5-201ENST00000375703 TMC3Q7Z5M5 1100 aa15.78■□□□□ 0.12
MSH5-201ENST00000375703 TRIM31Q9BZY9 425 aa15.78■□□□□ 0.12
MSH5-201ENST00000375703 ODF2LQ9ULJ1 636 aa15.78■□□□□ 0.12
MSH5-201ENST00000375703 UBE4BO95155 1302 aa15.78■□□□□ 0.12
MSH5-201ENST00000375703 SPATA31A6Q5VVP1 1343 aa15.78■□□□□ 0.12
MSH5-201ENST00000375703 ECE1P42892 770 aa15.77■□□□□ 0.12
MSH5-201ENST00000375703 MYL7Q01449 175 aa15.77■□□□□ 0.12
MSH5-201ENST00000375703 PHLDB3Q6NSJ2 640 aa15.77■□□□□ 0.12
MSH5-201ENST00000375703 ARHGEF26Q96DR7 871 aa15.77■□□□□ 0.12
MSH5-201ENST00000375703 CSRNP1Q96S65 589 aa15.77■□□□□ 0.12
MSH5-201ENST00000375703 THAP2Q9H0W7 228 aa15.77■□□□□ 0.12
MSH5-201ENST00000375703 TAS2R14Q9NYV8 317 aa15.77■□□□□ 0.12
MSH5-201ENST00000375703 WRAP73Q9P2S5 460 aaPredicted RBP15.77■□□□□ 0.12
MSH5-201ENST00000375703 IGSF9BQ9UPX0 1349 aa15.77■□□□□ 0.12
MSH5-201ENST00000375703 ANKRD62A6NC57 917 aa15.77■□□□□ 0.11
MSH5-201ENST00000375703 SRRM3A6NNA2 597 aaPredicted RBP15.77■□□□□ 0.11
MSH5-201ENST00000375703 FOXN3O00409 490 aaPredicted RBP15.77■□□□□ 0.11
MSH5-201ENST00000375703 ENTPD3O75355 529 aa15.77■□□□□ 0.11
MSH5-201ENST00000375703 FAM107AO95990 144 aa15.77■□□□□ 0.11
MSH5-201ENST00000375703 MUTP22033 750 aa15.77■□□□□ 0.11
MSH5-201ENST00000375703 PPARDQ03181 441 aa15.77■□□□□ 0.11
MSH5-201ENST00000375703 CEP55Q53EZ4 464 aa15.77■□□□□ 0.11
MSH5-201ENST00000375703 DCAF12L1Q5VU92 463 aa15.77■□□□□ 0.11
MSH5-201ENST00000375703 ADAT2Q7Z6V5 191 aaKnown RBP15.77■□□□□ 0.11
MSH5-201ENST00000375703 HOOK2Q96ED9 719 aa15.77■□□□□ 0.11
MSH5-201ENST00000375703 NAP1L3Q99457 506 aaPredicted RBP15.77■□□□□ 0.11
MSH5-201ENST00000375703 ZNF577Q9BSK1 485 aa15.77■□□□□ 0.11
MSH5-201ENST00000375703 KCND2Q9NZV8 630 aa15.77■□□□□ 0.11
MSH5-201ENST00000375703 FRMPD4Q14CM0 1322 aa15.77■□□□□ 0.11
MSH5-201ENST00000375703 BFSP1Q12934 665 aa15.76■□□□□ 0.11
MSH5-201ENST00000375703 AGBL2Q5U5Z8 902 aa15.76■□□□□ 0.11
MSH5-201ENST00000375703 TRIM51Q9BSJ1 452 aa15.76■□□□□ 0.11
MSH5-201ENST00000375703 PAGR1Q9BTK6 254 aa15.76■□□□□ 0.11
MSH5-201ENST00000375703 RAB17Q9H0T7 212 aa15.76■□□□□ 0.11
MSH5-201ENST00000375703 CARD9Q9H257 536 aa15.76■□□□□ 0.11
MSH5-201ENST00000375703 UNC45AQ9H3U1 944 aa15.76■□□□□ 0.11
MSH5-201ENST00000375703 NOVA2Q9UNW9 492 aaKnown RBP15.76■□□□□ 0.11
MSH5-201ENST00000375703 ATXN2Q99700 1313 aaKnown RBP15.76■□□□□ 0.11
MSH5-201ENST00000375703 ARP10275 920 aa15.76■□□□□ 0.11
MSH5-201ENST00000375703 PTENP60484 403 aa15.76■□□□□ 0.11
MSH5-201ENST00000375703 PPP2R5EQ16537 467 aa15.76■□□□□ 0.11
MSH5-201ENST00000375703 KIAA1755Q5JYT7 1200 aa15.76■□□□□ 0.11
MSH5-201ENST00000375703 WDR11Q9BZH6 1224 aa15.76■□□□□ 0.11
MSH5-201ENST00000375703 XPO5Q9HAV4 1204 aaKnown RBP eCLIP15.76■□□□□ 0.11
MSH5-201ENST00000375703 ARHGEF10LQ9HCE6 1279 aa15.76■□□□□ 0.11
MSH5-201ENST00000375703 ZNF219Q9P2Y4 722 aaPredicted RBP15.76■□□□□ 0.11
MSH5-201ENST00000375703 ARHGEF35A5YM69 484 aa15.75■□□□□ 0.11
MSH5-201ENST00000375703 LRRN2O75325 713 aa15.75■□□□□ 0.11
MSH5-201ENST00000375703 DR1Q01658 176 aa15.75■□□□□ 0.11
MSH5-201ENST00000375703 ZNF211Q13398 564 aaPredicted RBP15.75■□□□□ 0.11
MSH5-201ENST00000375703 ACER1Q8TDN7 264 aa15.75■□□□□ 0.11
MSH5-201ENST00000375703 KAT2BQ92831 832 aa15.75■□□□□ 0.11
MSH5-201ENST00000375703 PRMT6Q96LA8 375 aaPredicted RBP15.75■□□□□ 0.11
MSH5-201ENST00000375703 AGPAT1Q99943 283 aa15.75■□□□□ 0.11
MSH5-201ENST00000375703 EHMT1Q9H9B1 1298 aa15.75■□□□□ 0.11
MSH5-201ENST00000375703 ANKRD31Q8N7Z5 1873 aa15.75■□□□□ 0.11
MSH5-201ENST00000375703 GOLGA6L10A0A0M3HER8 536 aa15.75■□□□□ 0.11
MSH5-201ENST00000375703 GMNCA6NCL1 334 aa15.75■□□□□ 0.11
MSH5-201ENST00000375703 HIP1RO75146 1068 aa15.75■□□□□ 0.11
MSH5-201ENST00000375703 VIL1P09327 827 aaKnown RBP15.75■□□□□ 0.11
MSH5-201ENST00000375703 BCRP11274 1271 aa15.75■□□□□ 0.11
MSH5-201ENST00000375703 KRT13P13646 458 aa15.75■□□□□ 0.11
MSH5-201ENST00000375703 TMOD1P28289 359 aa15.75■□□□□ 0.11
MSH5-201ENST00000375703 AFF2P51816 1311 aa15.75■□□□□ 0.11
MSH5-201ENST00000375703 PPP2R2AP63151 447 aa15.75■□□□□ 0.11
MSH5-201ENST00000375703 KIF22Q14807 665 aa15.75■□□□□ 0.11
MSH5-201ENST00000375703 COL23A1Q86Y22 540 aaPredicted RBP15.75■□□□□ 0.11
MSH5-201ENST00000375703 PALB2Q86YC2 1186 aa15.75■□□□□ 0.11
MSH5-201ENST00000375703 SLC9A9Q8IVB4 645 aa15.75■□□□□ 0.11
MSH5-201ENST00000375703 TEX2Q8IWB9 1127 aa15.75■□□□□ 0.11
MSH5-201ENST00000375703 BANK1Q8NDB2 785 aa15.75■□□□□ 0.11
MSH5-201ENST00000375703 FMO2Q99518 471 aa15.75■□□□□ 0.11
MSH5-201ENST00000375703 UBE2TQ9NPD8 197 aaPredicted RBP15.75■□□□□ 0.11
MSH5-201ENST00000375703 SLC12A6Q9UHW9 1150 aa15.75■□□□□ 0.11
MSH5-201ENST00000375703 SYNPO2Q9UMS6 1093 aa15.75■□□□□ 0.11
MSH5-201ENST00000375703 COG5Q9UP83 839 aa15.75■□□□□ 0.11
MSH5-201ENST00000375703 ATP8A1Q9Y2Q0 1164 aa15.75■□□□□ 0.11
MSH5-201ENST00000375703 DAAM1Q9Y4D1 1078 aa15.75■□□□□ 0.11
MSH5-201ENST00000375703 CAPN7Q9Y6W3 813 aa15.75■□□□□ 0.11
MSH5-201ENST00000375703 ATRNL1Q5VV63 1379 aa15.74■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms