RNA–Protein interactions for RNA: ENST00000375661.5

LSM2-208, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM2, Length 876 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-208ENST00000375661 FGFR1P11362 822 aa13.69□□□□□ -0.22
LSM2-208ENST00000375661 XBP1P17861 261 aa13.69□□□□□ -0.22
LSM2-208ENST00000375661 ZNF76P36508 570 aa13.69□□□□□ -0.22
LSM2-208ENST00000375661 FOXK2Q01167 660 aa13.69□□□□□ -0.22
LSM2-208ENST00000375661 MTMR3Q13615 1198 aa13.69□□□□□ -0.22
LSM2-208ENST00000375661 BMS1Q14692 1282 aaKnown RBP13.69□□□□□ -0.22
LSM2-208ENST00000375661 KIZQ2M2Z5 673 aa13.69□□□□□ -0.22
LSM2-208ENST00000375661 MCTP2Q6DN12 878 aa13.69□□□□□ -0.22
LSM2-208ENST00000375661 GALNT17Q6IS24 598 aa13.69□□□□□ -0.22
LSM2-208ENST00000375661 CES5AQ6NT32 575 aa13.69□□□□□ -0.22
LSM2-208ENST00000375661 ZNF746Q6NUN9 644 aaPredicted RBP13.69□□□□□ -0.22
LSM2-208ENST00000375661 ABI1Q8IZP0 508 aa13.69□□□□□ -0.22
LSM2-208ENST00000375661 BLIDQ8IZY5 108 aa13.69□□□□□ -0.22
LSM2-208ENST00000375661 REXO1Q8N1G1 1221 aaKnown RBP13.69□□□□□ -0.22
LSM2-208ENST00000375661 OXER1Q8TDS5 423 aa13.69□□□□□ -0.22
LSM2-208ENST00000375661 RSPH1Q8WYR4 309 aa13.69□□□□□ -0.22
LSM2-208ENST00000375661 INTS4Q96HW7 963 aaKnown RBP13.69□□□□□ -0.22
LSM2-208ENST00000375661 CASD1Q96PB1 797 aa13.69□□□□□ -0.22
LSM2-208ENST00000375661 ADAM7Q9H2U9 754 aa13.69□□□□□ -0.22
LSM2-208ENST00000375661 TBC1D22BQ9NU19 505 aa13.69□□□□□ -0.22
LSM2-208ENST00000375661 HCSTQ9UBK5 93 aa13.69□□□□□ -0.22
LSM2-208ENST00000375661 SORCS3Q9UPU3 1222 aa13.69□□□□□ -0.22
LSM2-208ENST00000375661 MAFBQ9Y5Q3 323 aaPredicted RBP13.69□□□□□ -0.22
LSM2-208ENST00000375661 DENND4AQ7Z401 1863 aa13.68□□□□□ -0.22
LSM2-208ENST00000375661 DDX39AO00148 427 aaKnown RBP13.68□□□□□ -0.22
LSM2-208ENST00000375661 DHX15O43143 795 aaKnown RBP13.68□□□□□ -0.22
LSM2-208ENST00000375661 CYP3A4P08684 503 aa13.68□□□□□ -0.22
LSM2-208ENST00000375661 ZSCAN20P17040 1043 aaPredicted RBP13.68□□□□□ -0.22
LSM2-208ENST00000375661 ATP4AP20648 1035 aa13.68□□□□□ -0.22
LSM2-208ENST00000375661 SETQ01105 290 aaPredicted RBP13.68□□□□□ -0.22
LSM2-208ENST00000375661 GUCY1B3Q02153 619 aa13.68□□□□□ -0.22
LSM2-208ENST00000375661 SMC1AQ14683 1233 aaKnown RBP13.68□□□□□ -0.22
LSM2-208ENST00000375661 SWSAP1Q6NVH7 229 aa13.68□□□□□ -0.22
LSM2-208ENST00000375661 LRRC55Q6ZSA7 311 aa13.68□□□□□ -0.22
LSM2-208ENST00000375661 TMC7Q7Z402 723 aa13.68□□□□□ -0.22
LSM2-208ENST00000375661 PLA2G4DQ86XP0 818 aa13.68□□□□□ -0.22
LSM2-208ENST00000375661 CKAP2LQ8IYA6 745 aa13.68□□□□□ -0.22
LSM2-208ENST00000375661 SMAP1Q8IYB5 467 aaPredicted RBP13.68□□□□□ -0.22
LSM2-208ENST00000375661 FBXO18Q8NFZ0 1043 aa13.68□□□□□ -0.22
LSM2-208ENST00000375661 BICD2Q8TD16 824 aa13.68□□□□□ -0.22
LSM2-208ENST00000375661 C8orf76Q96K31 380 aa13.68□□□□□ -0.22
LSM2-208ENST00000375661 FOXD4L1Q9NU39 408 aa13.68□□□□□ -0.22
LSM2-208ENST00000375661 FAM86C1Q9NVL1 165 aa13.68□□□□□ -0.22
LSM2-208ENST00000375661 SPG21Q9NZD8 308 aa13.68□□□□□ -0.22
LSM2-208ENST00000375661 IGLV3-22A0A075B6J6 115 aa13.67□□□□□ -0.22
LSM2-208ENST00000375661 HIDE1A8MVS5 230 aa13.67□□□□□ -0.22
LSM2-208ENST00000375661 IPO5O00410 1097 aaKnown RBP13.67□□□□□ -0.22
LSM2-208ENST00000375661 EDIL3O43854 480 aa13.67□□□□□ -0.22
LSM2-208ENST00000375661 EOMESO95936 686 aa13.67□□□□□ -0.22
LSM2-208ENST00000375661 VTNP04004 478 aa13.67□□□□□ -0.22
LSM2-208ENST00000375661 TMOD1P28289 359 aa13.67□□□□□ -0.22
LSM2-208ENST00000375661 MTHFRP42898 656 aa13.67□□□□□ -0.22
LSM2-208ENST00000375661 LLGL2Q6P1M3 1020 aa13.67□□□□□ -0.22
LSM2-208ENST00000375661 ECHDC2Q86YB7 292 aa13.67□□□□□ -0.22
LSM2-208ENST00000375661 METTL13Q8N6R0 699 aa13.67□□□□□ -0.22
LSM2-208ENST00000375661 MRPL43Q8N983 215 aaKnown RBP13.67□□□□□ -0.22
LSM2-208ENST00000375661 KREMEN2Q8NCW0 462 aa13.67□□□□□ -0.22
LSM2-208ENST00000375661 CRYGNQ8WXF5 182 aa13.67□□□□□ -0.22
LSM2-208ENST00000375661 TNFRSF25Q93038 417 aa13.67□□□□□ -0.22
LSM2-208ENST00000375661 FAM167AQ96KS9 214 aa13.67□□□□□ -0.22
LSM2-208ENST00000375661 MAP7D2Q96T17 732 aa13.67□□□□□ -0.22
LSM2-208ENST00000375661 RNF19AQ9NV58 838 aa13.67□□□□□ -0.22
LSM2-208ENST00000375661 TCEAL9Q9UHQ7 104 aa13.67□□□□□ -0.22
LSM2-208ENST00000375661 HCFC2Q9Y5Z7 792 aa13.67□□□□□ -0.22
LSM2-208ENST00000375661 USP34Q70CQ2 3546 aa13.67□□□□□ -0.22
LSM2-208ENST00000375661 C2orf71A6NGG8 1288 aa13.66□□□□□ -0.22
LSM2-208ENST00000375661 BTBD18B2RXH4 712 aa13.66□□□□□ -0.22
LSM2-208ENST00000375661 FAM86B1E9PN63 330 aa13.66□□□□□ -0.22
LSM2-208ENST00000375661 PSAPP07602 524 aa13.66□□□□□ -0.22
LSM2-208ENST00000375661 FAM86B2P0C5J1 330 aa13.66□□□□□ -0.22
LSM2-208ENST00000375661 EIF4BP23588 611 aaKnown RBP13.66□□□□□ -0.22
LSM2-208ENST00000375661 KRT2P35908 639 aa13.66□□□□□ -0.22
LSM2-208ENST00000375661 NR5A1Q13285 461 aa13.66□□□□□ -0.22
LSM2-208ENST00000375661 TRIM29Q14134 588 aa13.66□□□□□ -0.22
LSM2-208ENST00000375661 GIT2Q14161 759 aa13.66□□□□□ -0.22
LSM2-208ENST00000375661 EARS2Q5JPH6 523 aaKnown RBP13.66□□□□□ -0.22
LSM2-208ENST00000375661 DIS3L2Q8IYB7 885 aaKnown RBP13.66□□□□□ -0.22
LSM2-208ENST00000375661 SLC39A11Q8N1S5 342 aa13.66□□□□□ -0.22
LSM2-208ENST00000375661 PLCD3Q8N3E9 789 aa13.66□□□□□ -0.22
LSM2-208ENST00000375661 LINC01465Q8N7H1 131 aa13.66□□□□□ -0.22
LSM2-208ENST00000375661 PPP1R16BQ96T49 567 aa13.66□□□□□ -0.22
LSM2-208ENST00000375661 ZNF577Q9BSK1 485 aa13.66□□□□□ -0.22
LSM2-208ENST00000375661 MRPL9Q9BYD2 267 aaKnown RBP13.66□□□□□ -0.22
LSM2-208ENST00000375661 ADAMTS10Q9H324 1103 aa13.66□□□□□ -0.22
LSM2-208ENST00000375661 DZANK1Q9NVP4 752 aa13.66□□□□□ -0.22
LSM2-208ENST00000375661 PCDHA10Q9Y5I2 948 aa13.66□□□□□ -0.22
LSM2-208ENST00000375661 CACNA1HO95180 2353 aa13.66□□□□□ -0.22
LSM2-208ENST00000375661 A0A0U1RQF3 1178 aa13.65□□□□□ -0.22
LSM2-208ENST00000375661 C2CD4DB7Z1M9 353 aa13.65□□□□□ -0.22
LSM2-208ENST00000375661 H0Y858 1186 aa13.65□□□□□ -0.22
LSM2-208ENST00000375661 PDGFBP01127 241 aaPredicted RBP13.65□□□□□ -0.22
LSM2-208ENST00000375661 NBL1P41271 181 aa13.65□□□□□ -0.22
LSM2-208ENST00000375661 NLRP11P59045 1033 aaKnown RBP13.65□□□□□ -0.22
LSM2-208ENST00000375661 EFCAB12Q6NXP0 572 aa13.65□□□□□ -0.22
LSM2-208ENST00000375661 ZDHHC14Q8IZN3 488 aa13.65□□□□□ -0.22
LSM2-208ENST00000375661 APOL5Q9BWW9 433 aa13.65□□□□□ -0.22
LSM2-208ENST00000375661 POMKQ9H5K3 350 aa13.65□□□□□ -0.22
LSM2-208ENST00000375661 TSHZ2Q9NRE2 1034 aa13.65□□□□□ -0.22
LSM2-208ENST00000375661 DACT1Q9NYF0 836 aa13.65□□□□□ -0.22
LSM2-208ENST00000375661 AKT3Q9Y243 479 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms