RNA–Protein interactions for RNA: ENST00000374949.2

HLA-DQA1-202, Transcript of major histocompatibility complex, class II, DQ alpha 1, humanhuman

APPRIS P1 BASIC

Gene HLA-DQA1, Length 1,060 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1-202ENST00000374949 SETQ01105 290 aaPredicted RBP12.19□□□□□ -0.46
HLA-DQA1-202ENST00000374949 PPFIA1Q13136 1202 aa12.19□□□□□ -0.46
HLA-DQA1-202ENST00000374949 BTG3Q14201 252 aaPredicted RBP12.19□□□□□ -0.46
HLA-DQA1-202ENST00000374949 SMAD2Q15796 467 aaKnown RBP12.19□□□□□ -0.46
HLA-DQA1-202ENST00000374949 CTC1Q2NKJ3 1217 aa12.19□□□□□ -0.46
HLA-DQA1-202ENST00000374949 RRAGBQ5VZM2 374 aa12.19□□□□□ -0.46
HLA-DQA1-202ENST00000374949 KRT79Q5XKE5 535 aa12.19□□□□□ -0.46
HLA-DQA1-202ENST00000374949 SASS6Q6UVJ0 657 aa12.19□□□□□ -0.46
HLA-DQA1-202ENST00000374949 RASSF8Q8NHQ8 419 aa12.19□□□□□ -0.46
HLA-DQA1-202ENST00000374949 LINC01599Q8WXQ3 324 aa12.19□□□□□ -0.46
HLA-DQA1-202ENST00000374949 DHX58Q96C10 678 aa12.19□□□□□ -0.46
HLA-DQA1-202ENST00000374949 ZBTB10Q96DT7 871 aa12.19□□□□□ -0.46
HLA-DQA1-202ENST00000374949 CALML4Q96GE6 196 aa12.19□□□□□ -0.46
HLA-DQA1-202ENST00000374949 LMAN2LQ9H0V9 348 aa12.19□□□□□ -0.46
HLA-DQA1-202ENST00000374949 TSPY26PQ9H489 355 aa12.19□□□□□ -0.46
HLA-DQA1-202ENST00000374949 IGFLR1Q9H665 355 aa12.19□□□□□ -0.46
HLA-DQA1-202ENST00000374949 JADE2Q9NQC1 790 aa12.19□□□□□ -0.46
HLA-DQA1-202ENST00000374949 PKD2L1Q9P0L9 805 aa12.19□□□□□ -0.46
HLA-DQA1-202ENST00000374949 TUBE1Q9UJT0 475 aa12.19□□□□□ -0.46
HLA-DQA1-202ENST00000374949 RWDD3Q9Y3V2 267 aa12.19□□□□□ -0.46
HLA-DQA1-202ENST00000374949 STK24Q9Y6E0 443 aa12.19□□□□□ -0.46
HLA-DQA1-202ENST00000374949 PLXNA4Q9HCM2 1894 aa12.19□□□□□ -0.46
HLA-DQA1-202ENST00000374949 A0A087X0B3 334 aa12.18□□□□□ -0.46
HLA-DQA1-202ENST00000374949 GOLGA6L3A6NEY3 463 aa12.18□□□□□ -0.46
HLA-DQA1-202ENST00000374949 PP2D1A8MPX8 630 aa12.18□□□□□ -0.46
HLA-DQA1-202ENST00000374949 ACTN4O43707 911 aaKnown RBP12.18□□□□□ -0.46
HLA-DQA1-202ENST00000374949 RB1P06400 928 aa12.18□□□□□ -0.46
HLA-DQA1-202ENST00000374949 CCDC192P0DO97 292 aa12.18□□□□□ -0.46
HLA-DQA1-202ENST00000374949 ARP10275 920 aa12.18□□□□□ -0.46
HLA-DQA1-202ENST00000374949 SMAD4Q13485 552 aaKnown RBP12.18□□□□□ -0.46
HLA-DQA1-202ENST00000374949 KARSQ15046 597 aaKnown RBP12.18□□□□□ -0.46
HLA-DQA1-202ENST00000374949 GRIK4Q16099 956 aa12.18□□□□□ -0.46
HLA-DQA1-202ENST00000374949 FBXO47Q5MNV8 452 aa12.18□□□□□ -0.46
HLA-DQA1-202ENST00000374949 TAF2Q6P1X5 1199 aa12.18□□□□□ -0.46
HLA-DQA1-202ENST00000374949 NLRX1Q86UT6 975 aa12.18□□□□□ -0.46
HLA-DQA1-202ENST00000374949 DNAJB3Q8WWF6 145 aa12.18□□□□□ -0.46
HLA-DQA1-202ENST00000374949 SLC5A5Q92911 643 aa12.18□□□□□ -0.46
HLA-DQA1-202ENST00000374949 CLP1Q92989 425 aaKnown RBP12.18□□□□□ -0.46
HLA-DQA1-202ENST00000374949 GJA10Q969M2 543 aa12.18□□□□□ -0.46
HLA-DQA1-202ENST00000374949 POP1Q99575 1024 aaKnown RBP12.18□□□□□ -0.46
HLA-DQA1-202ENST00000374949 ZNF577Q9BSK1 485 aa12.18□□□□□ -0.46
HLA-DQA1-202ENST00000374949 ALG13Q9NP73 1137 aaKnown RBP12.18□□□□□ -0.46
HLA-DQA1-202ENST00000374949 KIAA1468Q9P260 1216 aa12.18□□□□□ -0.46
HLA-DQA1-202ENST00000374949 CDY2AQ9Y6F7 541 aa12.18□□□□□ -0.46
HLA-DQA1-202ENST00000374949 MRPL42Q9Y6G3 142 aaKnown RBP12.18□□□□□ -0.46
HLA-DQA1-202ENST00000374949 ENPP3O14638 875 aa12.17□□□□□ -0.46
HLA-DQA1-202ENST00000374949 MAFGO15525 162 aa12.17□□□□□ -0.46
HLA-DQA1-202ENST00000374949 NCK2O43639 380 aa12.17□□□□□ -0.46
HLA-DQA1-202ENST00000374949 ATP9AO75110 1047 aa12.17□□□□□ -0.46
HLA-DQA1-202ENST00000374949 DGKIO75912 1065 aa12.17□□□□□ -0.46
HLA-DQA1-202ENST00000374949 KCNA2P16389 499 aa12.17□□□□□ -0.46
HLA-DQA1-202ENST00000374949 ITGB5P18084 799 aa12.17□□□□□ -0.46
HLA-DQA1-202ENST00000374949 DNAJB1P25685 340 aa12.17□□□□□ -0.46
HLA-DQA1-202ENST00000374949 CD52P31358 61 aa12.17□□□□□ -0.46
HLA-DQA1-202ENST00000374949 STAT6P42226 847 aa12.17□□□□□ -0.46
HLA-DQA1-202ENST00000374949 IGBP1P78318 339 aa12.17□□□□□ -0.46
HLA-DQA1-202ENST00000374949 MRPS6P82932 125 aaKnown RBP12.17□□□□□ -0.46
HLA-DQA1-202ENST00000374949 ZRSR1Q15695 479 aaKnown RBP12.17□□□□□ -0.46
HLA-DQA1-202ENST00000374949 E2F4Q16254 413 aa12.17□□□□□ -0.46
HLA-DQA1-202ENST00000374949 MARCH8Q5T0T0 291 aa12.17□□□□□ -0.46
HLA-DQA1-202ENST00000374949 TSHZ1Q6ZSZ6 1077 aa12.17□□□□□ -0.46
HLA-DQA1-202ENST00000374949 ADGRD2Q7Z7M1 963 aa12.17□□□□□ -0.46
HLA-DQA1-202ENST00000374949 RSPH3Q86UC2 560 aa12.17□□□□□ -0.46
HLA-DQA1-202ENST00000374949 GAS2L3Q86XJ1 694 aa12.17□□□□□ -0.46
HLA-DQA1-202ENST00000374949 RNF135Q8IUD6 432 aa12.17□□□□□ -0.46
HLA-DQA1-202ENST00000374949 ERMNQ8TAM6 284 aa12.17□□□□□ -0.46
HLA-DQA1-202ENST00000374949 ZNF689Q96CS4 500 aaPredicted RBP12.17□□□□□ -0.46
HLA-DQA1-202ENST00000374949 PAGE5Q96GU1 130 aa12.17□□□□□ -0.46
HLA-DQA1-202ENST00000374949 CDK5RAP3Q96JB5 506 aa12.17□□□□□ -0.46
HLA-DQA1-202ENST00000374949 RIT2Q99578 217 aa12.17□□□□□ -0.46
HLA-DQA1-202ENST00000374949 SENP7Q9BQF6 1050 aa12.17□□□□□ -0.46
HLA-DQA1-202ENST00000374949 MMTAG2Q9BU76 263 aaKnown RBP12.17□□□□□ -0.46
HLA-DQA1-202ENST00000374949 FAM49AQ9H0Q0 323 aaPredicted RBP12.17□□□□□ -0.46
HLA-DQA1-202ENST00000374949 CUEDC2Q9H467 287 aa12.17□□□□□ -0.46
HLA-DQA1-202ENST00000374949 AGO3Q9H9G7 860 aaKnown RBP12.17□□□□□ -0.46
HLA-DQA1-202ENST00000374949 DISC1Q9NRI5 854 aa12.17□□□□□ -0.46
HLA-DQA1-202ENST00000374949 CD207Q9UJ71 328 aa12.17□□□□□ -0.46
HLA-DQA1-202ENST00000374949 ZDBF2Q9HCK1 2354 aa12.16□□□□□ -0.46
HLA-DQA1-202ENST00000374949 GSTTP1A0A1W2PQM5 241 aa12.16□□□□□ -0.46
HLA-DQA1-202ENST00000374949 MBLAC1A4D2B0 266 aaPredicted RBP12.16□□□□□ -0.46
HLA-DQA1-202ENST00000374949 POTEMA6NI47 508 aa12.16□□□□□ -0.46
HLA-DQA1-202ENST00000374949 IPO5O00410 1097 aaKnown RBP12.16□□□□□ -0.46
HLA-DQA1-202ENST00000374949 GAS7O60861 476 aa12.16□□□□□ -0.46
HLA-DQA1-202ENST00000374949 PSMD10O75832 226 aa12.16□□□□□ -0.46
HLA-DQA1-202ENST00000374949 NDUFV1P49821 464 aa12.16□□□□□ -0.46
HLA-DQA1-202ENST00000374949 TMEM62Q0P6H9 643 aa12.16□□□□□ -0.46
HLA-DQA1-202ENST00000374949 MTMR1Q13613 665 aa12.16□□□□□ -0.46
HLA-DQA1-202ENST00000374949 CAMK1Q14012 370 aa12.16□□□□□ -0.46
HLA-DQA1-202ENST00000374949 POSTNQ15063 836 aa12.16□□□□□ -0.46
HLA-DQA1-202ENST00000374949 PAN2Q504Q3 1202 aaKnown RBP12.16□□□□□ -0.46
HLA-DQA1-202ENST00000374949 HERC4Q5GLZ8 1057 aaPredicted RBP12.16□□□□□ -0.46
HLA-DQA1-202ENST00000374949 LRCH2Q5VUJ6 765 aa12.16□□□□□ -0.46
HLA-DQA1-202ENST00000374949 PDXDC2PQ6P474 469 aa12.16□□□□□ -0.46
HLA-DQA1-202ENST00000374949 GIMAP8Q8ND71 665 aaPredicted RBP12.16□□□□□ -0.46
HLA-DQA1-202ENST00000374949 SNX29Q8TEQ0 813 aa12.16□□□□□ -0.46
HLA-DQA1-202ENST00000374949 GLG1Q92896 1179 aa12.16□□□□□ -0.46
HLA-DQA1-202ENST00000374949 GPRASP2Q96D09 838 aa12.16□□□□□ -0.46
HLA-DQA1-202ENST00000374949 PLIN2Q99541 437 aa12.16□□□□□ -0.46
HLA-DQA1-202ENST00000374949 FUCA2Q9BTY2 467 aa12.16□□□□□ -0.46
HLA-DQA1-202ENST00000374949 MAGEF1Q9HAY2 307 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms