RNA–Protein interactions for RNA: ENST00000374358.4

TMEM50A-201, Transcript of transmembrane protein 50A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM50A, Length 2,683 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM50A-201ENST00000374358 PBKQ96KB5 322 aa16.92■□□□□ 0.3
TMEM50A-201ENST00000374358 WDR11Q9BZH6 1224 aa16.92■□□□□ 0.3
TMEM50A-201ENST00000374358 DPH5Q9H2P9 285 aa16.92■□□□□ 0.3
TMEM50A-201ENST00000374358 RANBP17Q9H2T7 1088 aaKnown RBP16.92■□□□□ 0.3
TMEM50A-201ENST00000374358 GOPCQ9HD26 462 aa16.92■□□□□ 0.3
TMEM50A-201ENST00000374358 ACP6Q9NPH0 428 aa16.92■□□□□ 0.3
TMEM50A-201ENST00000374358 NFIBO00712 420 aa16.92■□□□□ 0.3
TMEM50A-201ENST00000374358 FGGP02679 453 aa16.92■□□□□ 0.3
TMEM50A-201ENST00000374358 HPDP32754 393 aaPredicted RBP16.92■□□□□ 0.3
TMEM50A-201ENST00000374358 HSD17B3P37058 310 aa16.92■□□□□ 0.3
TMEM50A-201ENST00000374358 ZNF131P52739 623 aa16.92■□□□□ 0.3
TMEM50A-201ENST00000374358 IFI16Q16666 785 aaKnown RBP16.92■□□□□ 0.3
TMEM50A-201ENST00000374358 ZNF746Q6NUN9 644 aaPredicted RBP16.92■□□□□ 0.3
TMEM50A-201ENST00000374358 C7orf43Q8WVR3 580 aa16.92■□□□□ 0.3
TMEM50A-201ENST00000374358 TRIM51Q9BSJ1 452 aa16.92■□□□□ 0.3
TMEM50A-201ENST00000374358 STK33Q9BYT3 514 aa16.92■□□□□ 0.3
TMEM50A-201ENST00000374358 ISCUQ9H1K1 167 aa16.92■□□□□ 0.3
TMEM50A-201ENST00000374358 HOMER2Q9NSB8 354 aa16.92■□□□□ 0.3
TMEM50A-201ENST00000374358 COG5Q9UP83 839 aa16.92■□□□□ 0.3
TMEM50A-201ENST00000374358 ARHGEF35A5YM69 484 aa16.91■□□□□ 0.3
TMEM50A-201ENST00000374358 FOXN3O00409 490 aaPredicted RBP16.91■□□□□ 0.3
TMEM50A-201ENST00000374358 KAT5Q92993 513 aa16.91■□□□□ 0.3
TMEM50A-201ENST00000374358 NACC1Q96RE7 527 aa16.91■□□□□ 0.3
TMEM50A-201ENST00000374358 CBWD1Q9BRT8 395 aa16.91■□□□□ 0.3
TMEM50A-201ENST00000374358 APEX2Q9UBZ4 518 aa16.91■□□□□ 0.3
TMEM50A-201ENST00000374358 STK24Q9Y6E0 443 aa16.91■□□□□ 0.3
TMEM50A-201ENST00000374358 CNTNAP1P78357 1384 aa16.91■□□□□ 0.3
TMEM50A-201ENST00000374358 BFSP1Q12934 665 aa16.91■□□□□ 0.3
TMEM50A-201ENST00000374358 MREGQ8N565 214 aa16.91■□□□□ 0.3
TMEM50A-201ENST00000374358 WHAMMQ8TF30 809 aa16.91■□□□□ 0.3
TMEM50A-201ENST00000374358 HES6Q96HZ4 224 aa16.91■□□□□ 0.3
TMEM50A-201ENST00000374358 SYT11Q9BT88 431 aa16.91■□□□□ 0.3
TMEM50A-201ENST00000374358 DMAC2Q9NW81 257 aa16.91■□□□□ 0.3
TMEM50A-201ENST00000374358 TMOD4Q9NZQ9 345 aa16.91■□□□□ 0.3
TMEM50A-201ENST00000374358 TMOD2Q9NZR1 351 aa16.91■□□□□ 0.3
TMEM50A-201ENST00000374358 ZNF70Q9UC06 446 aaPredicted RBP16.91■□□□□ 0.3
TMEM50A-201ENST00000374358 HERC5Q9UII4 1024 aaKnown RBP16.91■□□□□ 0.3
TMEM50A-201ENST00000374358 STYK1Q6J9G0 422 aa16.9■□□□□ 0.3
TMEM50A-201ENST00000374358 PADI6Q6TGC4 694 aa16.9■□□□□ 0.3
TMEM50A-201ENST00000374358 ARHGEF19Q8IW93 802 aa16.9■□□□□ 0.3
TMEM50A-201ENST00000374358 ERVK-5Q9HDB9 667 aa16.9■□□□□ 0.3
TMEM50A-201ENST00000374358 SUCLA2Q9P2R7 463 aaPredicted RBP16.9■□□□□ 0.3
TMEM50A-201ENST00000374358 NR1D1P20393 614 aa16.9■□□□□ 0.3
TMEM50A-201ENST00000374358 HSPA9P38646 679 aaKnown RBP16.9■□□□□ 0.3
TMEM50A-201ENST00000374358 GCLMP48507 274 aa16.9■□□□□ 0.3
TMEM50A-201ENST00000374358 TEKT3Q9BXF9 490 aa16.9■□□□□ 0.3
TMEM50A-201ENST00000374358 VCPKMTQ9H867 229 aa16.9■□□□□ 0.3
TMEM50A-201ENST00000374358 GPRC5CQ9NQ84 441 aa16.9■□□□□ 0.3
TMEM50A-201ENST00000374358 EMSYQ7Z589 1322 aa16.9■□□□□ 0.3
TMEM50A-201ENST00000374358 CES2O00748 559 aa16.89■□□□□ 0.29
TMEM50A-201ENST00000374358 INPP5BP32019 993 aa16.89■□□□□ 0.29
TMEM50A-201ENST00000374358 CORO7P57737 925 aa16.89■□□□□ 0.29
TMEM50A-201ENST00000374358 PPP3CAQ08209 521 aa16.89■□□□□ 0.29
TMEM50A-201ENST00000374358 SPP2Q13103 211 aa16.89■□□□□ 0.29
TMEM50A-201ENST00000374358 CPXCR1Q8N123 301 aa16.89■□□□□ 0.29
TMEM50A-201ENST00000374358 CTNNBL1Q8WYA6 563 aaPredicted RBP16.89■□□□□ 0.29
TMEM50A-201ENST00000374358 RFFLQ8WZ73 363 aa16.89■□□□□ 0.29
TMEM50A-201ENST00000374358 KCNH7Q9NS40 1196 aa16.89■□□□□ 0.29
TMEM50A-201ENST00000374358 ATMINO43313 823 aaPredicted RBP16.89■□□□□ 0.29
TMEM50A-201ENST00000374358 USP8P40818 1118 aa16.89■□□□□ 0.29
TMEM50A-201ENST00000374358 MARCKSL1P49006 195 aa16.89■□□□□ 0.29
TMEM50A-201ENST00000374358 SEC24CP53992 1094 aa16.89■□□□□ 0.29
TMEM50A-201ENST00000374358 SKOR1P84550 965 aa16.89■□□□□ 0.29
TMEM50A-201ENST00000374358 B3GNT9Q6UX72 402 aa16.89■□□□□ 0.29
TMEM50A-201ENST00000374358 LMO3Q8TAP4 145 aa16.89■□□□□ 0.29
TMEM50A-201ENST00000374358 ALG3Q92685 438 aa16.89■□□□□ 0.29
TMEM50A-201ENST00000374358 UBE2TQ9NPD8 197 aaPredicted RBP16.89■□□□□ 0.29
TMEM50A-201ENST00000374358 AMFRQ9UKV5 643 aa16.89■□□□□ 0.29
TMEM50A-201ENST00000374358 MRPL11Q9Y3B7 192 aaKnown RBP16.89■□□□□ 0.29
TMEM50A-201ENST00000374358 A0A0A6YYK5 440 aaPredicted RBP16.88■□□□□ 0.29
TMEM50A-201ENST00000374358 GOLGA8IPA6NC78 632 aa16.88■□□□□ 0.29
TMEM50A-201ENST00000374358 GOLGA8JA6NMD2 632 aa16.88■□□□□ 0.29
TMEM50A-201ENST00000374358 TMEM110-MUSTN1A8MSY1 372 aa16.88■□□□□ 0.29
TMEM50A-201ENST00000374358 VGLL3A8MV65 326 aa16.88■□□□□ 0.29
TMEM50A-201ENST00000374358 DDX3YO15523 660 aaKnown RBP16.88■□□□□ 0.29
TMEM50A-201ENST00000374358 PPP1R37O75864 691 aa16.88■□□□□ 0.29
TMEM50A-201ENST00000374358 DLGAP5Q15398 846 aa16.88■□□□□ 0.29
TMEM50A-201ENST00000374358 CPNE8Q86YQ8 564 aa16.88■□□□□ 0.29
TMEM50A-201ENST00000374358 RASGEF1CQ8N431 466 aa16.88■□□□□ 0.29
TMEM50A-201ENST00000374358 PLEKHO2Q8TD55 490 aa16.88■□□□□ 0.29
TMEM50A-201ENST00000374358 UBLCP1Q8WVY7 318 aaPredicted RBP16.88■□□□□ 0.29
TMEM50A-201ENST00000374358 ATP6V1G3Q96LB4 118 aa16.88■□□□□ 0.29
TMEM50A-201ENST00000374358 MKNK1Q9BUB5 465 aa16.88■□□□□ 0.29
TMEM50A-201ENST00000374358 CCPG1Q9ULG6 757 aa16.88■□□□□ 0.29
TMEM50A-201ENST00000374358 LMNB1P20700 586 aa16.88■□□□□ 0.29
TMEM50A-201ENST00000374358 TNFAIP3P21580 790 aa16.88■□□□□ 0.29
TMEM50A-201ENST00000374358 CTNNA1P35221 906 aaKnown RBP16.88■□□□□ 0.29
TMEM50A-201ENST00000374358 ITGB3BPQ13352 177 aaPredicted RBP16.88■□□□□ 0.29
TMEM50A-201ENST00000374358 MIER3Q7Z3K6 550 aa16.88■□□□□ 0.29
TMEM50A-201ENST00000374358 CHURC1Q8WUH1 139 aa16.88■□□□□ 0.29
TMEM50A-201ENST00000374358 GLG1Q92896 1179 aa16.88■□□□□ 0.29
TMEM50A-201ENST00000374358 FAM84AQ96KN4 292 aa16.88■□□□□ 0.29
TMEM50A-201ENST00000374358 FAM107BQ9H098 131 aa16.88■□□□□ 0.29
TMEM50A-201ENST00000374358 ZNF277Q9NRM2 450 aaPredicted RBP16.88■□□□□ 0.29
TMEM50A-201ENST00000374358 ODF2LQ9ULJ1 636 aa16.88■□□□□ 0.29
TMEM50A-201ENST00000374358 ZHX2Q9Y6X8 837 aa16.88■□□□□ 0.29
TMEM50A-201ENST00000374358 COL4A5P29400 1685 aa16.87■□□□□ 0.29
TMEM50A-201ENST00000374358 DCDC2CA8MYV0 355 aa16.87■□□□□ 0.29
TMEM50A-201ENST00000374358 NDUFAB1O14561 156 aa16.87■□□□□ 0.29
TMEM50A-201ENST00000374358 TMEM253P0C7T8 217 aa16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms