RNA–Protein interactions for RNA: ENST00000373887.7

TRAF1-201, Transcript of TNF receptor associated factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF1, Length 6,324 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF1-201ENST00000373887 OSBPL3Q9H4L5 887 aa15.31■□□□□ 0.04
TRAF1-201ENST00000373887 MAGEF1Q9HAY2 307 aa15.31■□□□□ 0.04
TRAF1-201ENST00000373887 E9PMD0 336 aa15.31■□□□□ 0.04
TRAF1-201ENST00000373887 F5H423 210 aaPredicted RBP15.31■□□□□ 0.04
TRAF1-201ENST00000373887 SSTR3P32745 418 aaPredicted RBP15.31■□□□□ 0.04
TRAF1-201ENST00000373887 PRELPP51888 382 aa15.31■□□□□ 0.04
TRAF1-201ENST00000373887 ZNF568Q3ZCX4 644 aa15.31■□□□□ 0.04
TRAF1-201ENST00000373887 PASD1Q8IV76 773 aa15.31■□□□□ 0.04
TRAF1-201ENST00000373887 TTC17Q96AE7 1141 aa15.31■□□□□ 0.04
TRAF1-201ENST00000373887 PAGE5Q96GU1 130 aa15.31■□□□□ 0.04
TRAF1-201ENST00000373887 YY1AP1Q9H869 796 aa15.31■□□□□ 0.04
TRAF1-201ENST00000373887 SAMSN1Q9NSI8 373 aaKnown RBP15.31■□□□□ 0.04
TRAF1-201ENST00000373887 RASGRF2O14827 1237 aa15.31■□□□□ 0.04
TRAF1-201ENST00000373887 SPAG7O75391 227 aa15.31■□□□□ 0.04
TRAF1-201ENST00000373887 MXI1P50539 228 aa15.31■□□□□ 0.04
TRAF1-201ENST00000373887 TRMT2AQ8IZ69 625 aaKnown RBP15.31■□□□□ 0.04
TRAF1-201ENST00000373887 MMTAG2Q9BU76 263 aaKnown RBP15.31■□□□□ 0.04
TRAF1-201ENST00000373887 CCDC90BQ9GZT6 254 aa15.31■□□□□ 0.04
TRAF1-201ENST00000373887 FBXO40Q9UH90 709 aa15.31■□□□□ 0.04
TRAF1-201ENST00000373887 JRKLQ9Y4A0 524 aa15.31■□□□□ 0.04
TRAF1-201ENST00000373887 ANP32DO95626 131 aa15.3■□□□□ 0.04
TRAF1-201ENST00000373887 JAK3P52333 1124 aa15.3■□□□□ 0.04
TRAF1-201ENST00000373887 PMS1P54277 932 aaKnown RBP15.3■□□□□ 0.04
TRAF1-201ENST00000373887 RGS9BPQ6ZS82 235 aa15.3■□□□□ 0.04
TRAF1-201ENST00000373887 MED7O43513 233 aa15.3■□□□□ 0.04
TRAF1-201ENST00000373887 MAN1A2O60476 641 aa15.3■□□□□ 0.04
TRAF1-201ENST00000373887 TMEM106CQ9BVX2 250 aa15.3■□□□□ 0.04
TRAF1-201ENST00000373887 ZMYND12Q9H0C1 365 aa15.3■□□□□ 0.04
TRAF1-201ENST00000373887 POLR3EQ9NVU0 708 aa15.3■□□□□ 0.04
TRAF1-201ENST00000373887 DR1Q01658 176 aa15.3■□□□□ 0.04
TRAF1-201ENST00000373887 FAM117BQ6P1L5 589 aa15.3■□□□□ 0.04
TRAF1-201ENST00000373887 C1orf228Q6PIY5 440 aa15.3■□□□□ 0.04
TRAF1-201ENST00000373887 SAMD7Q7Z3H4 446 aa15.3■□□□□ 0.04
TRAF1-201ENST00000373887 GSDMAQ96QA5 445 aa15.3■□□□□ 0.04
TRAF1-201ENST00000373887 STK17AQ9UEE5 414 aa15.3■□□□□ 0.04
TRAF1-201ENST00000373887 OCM2P0CE71 109 aa15.3■□□□□ 0.04
TRAF1-201ENST00000373887 OCMP0CE72 109 aaPredicted RBP15.3■□□□□ 0.04
TRAF1-201ENST00000373887 ANO4Q32M45 955 aa15.3■□□□□ 0.04
TRAF1-201ENST00000373887 DGKHQ86XP1 1220 aa15.3■□□□□ 0.04
TRAF1-201ENST00000373887 ENOX1Q8TC92 643 aaKnown RBP15.3■□□□□ 0.04
TRAF1-201ENST00000373887 PYROXD1Q8WU10 500 aa15.3■□□□□ 0.04
TRAF1-201ENST00000373887 FAM213AQ9BRX8 229 aa15.3■□□□□ 0.04
TRAF1-201ENST00000373887 ISCA1Q9BUE6 129 aa15.3■□□□□ 0.04
TRAF1-201ENST00000373887 SPATA31A6Q5VVP1 1343 aa15.29■□□□□ 0.04
TRAF1-201ENST00000373887 CDHR2Q9BYE9 1310 aa15.29■□□□□ 0.04
TRAF1-201ENST00000373887 LINC00301Q8NCQ3 95 aa15.29■□□□□ 0.04
TRAF1-201ENST00000373887 KCNV2Q8TDN2 545 aa15.29■□□□□ 0.04
TRAF1-201ENST00000373887 FAF2Q96CS3 445 aa15.29■□□□□ 0.04
TRAF1-201ENST00000373887 DHTKD1Q96HY7 919 aaPredicted RBP15.29■□□□□ 0.04
TRAF1-201ENST00000373887 NHEJ1Q9H9Q4 299 aaPredicted RBP15.29■□□□□ 0.04
TRAF1-201ENST00000373887 PIDD1Q9HB75 910 aa15.29■□□□□ 0.04
TRAF1-201ENST00000373887 KIF17Q9P2E2 1029 aa15.29■□□□□ 0.04
TRAF1-201ENST00000373887 C1orf167Q5SNV9 1468 aa15.29■□□□□ 0.04
TRAF1-201ENST00000373887 WDR64B1ANS9 1081 aa15.29■□□□□ 0.04
TRAF1-201ENST00000373887 MAFGO15525 162 aa15.29■□□□□ 0.04
TRAF1-201ENST00000373887 CLDN3O15551 220 aa15.29■□□□□ 0.04
TRAF1-201ENST00000373887 UPP2O95045 317 aa15.29■□□□□ 0.04
TRAF1-201ENST00000373887 CA4P22748 312 aa15.29■□□□□ 0.04
TRAF1-201ENST00000373887 TSC22D3Q99576 134 aa15.29■□□□□ 0.04
TRAF1-201ENST00000373887 TUBB6Q9BUF5 446 aa15.29■□□□□ 0.04
TRAF1-201ENST00000373887 STRIP2Q9ULQ0 834 aa15.29■□□□□ 0.04
TRAF1-201ENST00000373887 TMEM247A6NEH6 219 aa15.29■□□□□ 0.04
TRAF1-201ENST00000373887 CELF2O95319 508 aaKnown RBP15.29■□□□□ 0.04
TRAF1-201ENST00000373887 ZBED1O96006 694 aa15.29■□□□□ 0.04
TRAF1-201ENST00000373887 NR1D1P20393 614 aa15.29■□□□□ 0.04
TRAF1-201ENST00000373887 CYP2B6P20813 491 aa15.29■□□□□ 0.04
TRAF1-201ENST00000373887 OCA2Q04671 838 aa15.29■□□□□ 0.04
TRAF1-201ENST00000373887 QRICH1Q2TAL8 776 aa15.29■□□□□ 0.04
TRAF1-201ENST00000373887 ZBTB18Q99592 522 aa15.29■□□□□ 0.04
TRAF1-201ENST00000373887 ELAC2Q9BQ52 826 aaKnown RBP15.29■□□□□ 0.04
TRAF1-201ENST00000373887 ACAD9Q9H845 621 aa15.29■□□□□ 0.04
TRAF1-201ENST00000373887 L3MBTL1Q9Y468 752 aa15.29■□□□□ 0.04
TRAF1-201ENST00000373887 ZNF500O60304 480 aaPredicted RBP15.29■□□□□ 0.04
TRAF1-201ENST00000373887 PDHA1P08559 390 aa15.29■□□□□ 0.04
TRAF1-201ENST00000373887 CTSHP09668 335 aa15.29■□□□□ 0.04
TRAF1-201ENST00000373887 SLFN14P0C7P3 912 aa15.29■□□□□ 0.04
TRAF1-201ENST00000373887 LZICQ8WZA0 190 aa15.29■□□□□ 0.04
TRAF1-201ENST00000373887 GTSE1Q9NYZ3 720 aa15.29■□□□□ 0.04
TRAF1-201ENST00000373887 FAM95CA0A1B0GW59 222 aa15.29■□□□□ 0.04
TRAF1-201ENST00000373887 DNAJC6O75061 913 aa15.29■□□□□ 0.04
TRAF1-201ENST00000373887 HSPA6P17066 643 aa15.29■□□□□ 0.04
TRAF1-201ENST00000373887 SMAD1Q15797 465 aaKnown RBP15.29■□□□□ 0.04
TRAF1-201ENST00000373887 PADI6Q6TGC4 694 aa15.29■□□□□ 0.04
TRAF1-201ENST00000373887 ING2Q9H160 280 aa15.29■□□□□ 0.04
TRAF1-201ENST00000373887 hCG_2014768A0A024R1R8 64 aa15.28■□□□□ 0.04
TRAF1-201ENST00000373887 IQANK1A0A1B0GTG1 560 aa15.28■□□□□ 0.04
TRAF1-201ENST00000373887 POTEB3A0JP26 581 aa15.28■□□□□ 0.04
TRAF1-201ENST00000373887 POTECB2RU33 542 aa15.28■□□□□ 0.04
TRAF1-201ENST00000373887 POTEBQ6S5H4 581 aa15.28■□□□□ 0.04
TRAF1-201ENST00000373887 THEM5Q8N1Q8 247 aa15.28■□□□□ 0.04
TRAF1-201ENST00000373887 STAG2Q8N3U4 1231 aa15.28■□□□□ 0.04
TRAF1-201ENST00000373887 OR6J1Q8NGC5 347 aa15.28■□□□□ 0.04
TRAF1-201ENST00000373887 CNOT10Q9H9A5 744 aaKnown RBP15.28■□□□□ 0.04
TRAF1-201ENST00000373887 PPARGC1AQ9UBK2 798 aaKnown RBP15.28■□□□□ 0.04
TRAF1-201ENST00000373887 TULP4Q9NRJ4 1543 aa15.28■□□□□ 0.04
TRAF1-201ENST00000373887 ZNF233A6NK53 670 aa15.28■□□□□ 0.04
TRAF1-201ENST00000373887 MAPK13O15264 365 aa15.28■□□□□ 0.04
TRAF1-201ENST00000373887 EIF4A3P38919 411 aaKnown RBP15.28■□□□□ 0.04
TRAF1-201ENST00000373887 GMPSP49915 693 aaPredicted RBP15.28■□□□□ 0.04
TRAF1-201ENST00000373887 NUGGCQ68CJ6 796 aa15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms