RNA–Protein interactions for RNA: ENST00000373672.7

COL16A1-203, Transcript of collagen type XVI alpha 1 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL16A1, Length 5,736 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-203ENST00000373672 DRP2Q13474 957 aa19.24■□□□□ 0.67
COL16A1-203ENST00000373672 SLFNL1Q499Z3 407 aa19.24■□□□□ 0.67
COL16A1-203ENST00000373672 ENAHQ8N8S7 591 aaPredicted RBP19.24■□□□□ 0.67
COL16A1-203ENST00000373672 ZFP69BQ9UJL9 534 aa19.24■□□□□ 0.67
COL16A1-203ENST00000373672 CASP1P29466 404 aa19.24■□□□□ 0.67
COL16A1-203ENST00000373672 HLFQ16534 295 aa19.24■□□□□ 0.67
COL16A1-203ENST00000373672 ZNF772Q68DY9 489 aaPredicted RBP19.24■□□□□ 0.67
COL16A1-203ENST00000373672 PRPF38AQ8NAV1 312 aaKnown RBP19.24■□□□□ 0.67
COL16A1-203ENST00000373672 FAM213AQ9BRX8 229 aa19.24■□□□□ 0.67
COL16A1-203ENST00000373672 MYO3BQ8WXR4 1341 aa19.24■□□□□ 0.67
COL16A1-203ENST00000373672 SLC16A4O15374 487 aa19.24■□□□□ 0.67
COL16A1-203ENST00000373672 TRIML2Q8N7C3 387 aa19.24■□□□□ 0.67
COL16A1-203ENST00000373672 OSBPL9Q96SU4 736 aa19.24■□□□□ 0.67
COL16A1-203ENST00000373672 FSD1LQ9BXM9 530 aa19.24■□□□□ 0.67
COL16A1-203ENST00000373672 GCOM2Q9BZD3 368 aaPredicted RBP19.24■□□□□ 0.67
COL16A1-203ENST00000373672 SAMD9LQ8IVG5 1584 aa19.24■□□□□ 0.67
COL16A1-203ENST00000373672 SFNP31947 248 aa19.24■□□□□ 0.67
COL16A1-203ENST00000373672 VAMP7P51809 220 aa19.24■□□□□ 0.67
COL16A1-203ENST00000373672 POLE2P56282 527 aa19.24■□□□□ 0.67
COL16A1-203ENST00000373672 LCA5Q86VQ0 697 aa19.24■□□□□ 0.67
COL16A1-203ENST00000373672 CYTH2Q99418 400 aa19.24■□□□□ 0.67
COL16A1-203ENST00000373672 CDHR2Q9BYE9 1310 aa19.24■□□□□ 0.67
COL16A1-203ENST00000373672 SNX2O60749 519 aa19.24■□□□□ 0.67
COL16A1-203ENST00000373672 ARHGDIAP52565 204 aa19.24■□□□□ 0.67
COL16A1-203ENST00000373672 ZNF568Q3ZCX4 644 aa19.24■□□□□ 0.67
COL16A1-203ENST00000373672 SEL1LQ9UBV2 794 aa19.24■□□□□ 0.67
COL16A1-203ENST00000373672 IP6K2Q9UHH9 426 aa19.24■□□□□ 0.67
COL16A1-203ENST00000373672 CHRNA3P32297 505 aa19.23■□□□□ 0.67
COL16A1-203ENST00000373672 COPS2P61201 443 aa19.23■□□□□ 0.67
COL16A1-203ENST00000373672 SEMA3FQ13275 785 aa19.23■□□□□ 0.67
COL16A1-203ENST00000373672 BUD13Q9BRD0 619 aaKnown RBP eCLIP19.23■□□□□ 0.672e-6■■■■■ 30.7
COL16A1-203ENST00000373672 GNAT1P11488 350 aa19.23■□□□□ 0.67
COL16A1-203ENST00000373672 EPHA10Q5JZY3 1008 aa19.23■□□□□ 0.67
COL16A1-203ENST00000373672 C11orf70Q9BRQ4 267 aa19.23■□□□□ 0.67
COL16A1-203ENST00000373672 KIFC3Q9BVG8 833 aa19.23■□□□□ 0.67
COL16A1-203ENST00000373672 MRPL40Q9NQ50 206 aaKnown RBP19.23■□□□□ 0.67
COL16A1-203ENST00000373672 HOXC10Q9NYD6 342 aa19.23■□□□□ 0.67
COL16A1-203ENST00000373672 PRKAG2Q9UGJ0 569 aa19.23■□□□□ 0.67
COL16A1-203ENST00000373672 USP17L10C9JJH3 530 aa19.23■□□□□ 0.67
COL16A1-203ENST00000373672 RPS6KA4O75676 772 aa19.23■□□□□ 0.67
COL16A1-203ENST00000373672 TTLL6Q8N841 843 aa19.23■□□□□ 0.67
COL16A1-203ENST00000373672 N4BP2L2Q92802 583 aaPredicted RBP19.23■□□□□ 0.67
COL16A1-203ENST00000373672 ALKBH8Q96BT7 664 aaKnown RBP19.23■□□□□ 0.67
COL16A1-203ENST00000373672 CEP19Q96LK0 163 aa19.23■□□□□ 0.67
COL16A1-203ENST00000373672 TRIM33Q9UPN9 1127 aa19.23■□□□□ 0.67
COL16A1-203ENST00000373672 POTEB3A0JP26 581 aa19.22■□□□□ 0.67
COL16A1-203ENST00000373672 POTECB2RU33 542 aa19.22■□□□□ 0.67
COL16A1-203ENST00000373672 USP17L15C9J2P7 530 aa19.22■□□□□ 0.67
COL16A1-203ENST00000373672 USP17L13C9JLJ4 530 aa19.22■□□□□ 0.67
COL16A1-203ENST00000373672 USP17L11C9JVI0 530 aa19.22■□□□□ 0.67
COL16A1-203ENST00000373672 USP17L18D6R9N7 530 aa19.22■□□□□ 0.67
COL16A1-203ENST00000373672 USP17L22D6RA61 530 aa19.22■□□□□ 0.67
COL16A1-203ENST00000373672 USP17L17D6RBQ6 530 aa19.22■□□□□ 0.67
COL16A1-203ENST00000373672 USP17L19D6RCP7 530 aa19.22■□□□□ 0.67
COL16A1-203ENST00000373672 USP17L20D6RJB6 530 aa19.22■□□□□ 0.67
COL16A1-203ENST00000373672 NSUN2Q08J23 767 aaKnown RBP eCLIP19.22■□□□□ 0.67
COL16A1-203ENST00000373672 USP17L24Q0WX57 530 aa19.22■□□□□ 0.67
COL16A1-203ENST00000373672 USP17L6PQ6QN14 398 aa19.22■□□□□ 0.67
COL16A1-203ENST00000373672 POTEBQ6S5H4 581 aa19.22■□□□□ 0.67
COL16A1-203ENST00000373672 BEST2Q8NFU1 509 aa19.22■□□□□ 0.67
COL16A1-203ENST00000373672 NCLNQ969V3 563 aa19.22■□□□□ 0.67
COL16A1-203ENST00000373672 RAVER2Q9HCJ3 691 aaKnown RBP19.22■□□□□ 0.67
COL16A1-203ENST00000373672 ZNF302Q9NR11 478 aa19.22■□□□□ 0.67
COL16A1-203ENST00000373672 HUS1O60921 280 aa19.22■□□□□ 0.67
COL16A1-203ENST00000373672 IGKV5-2P06315 115 aa19.22■□□□□ 0.67
COL16A1-203ENST00000373672 ALX1Q15699 326 aa19.22■□□□□ 0.67
COL16A1-203ENST00000373672 SLC10A4Q96EP9 437 aa19.22■□□□□ 0.67
COL16A1-203ENST00000373672 IFT43Q96FT9 208 aa19.22■□□□□ 0.67
COL16A1-203ENST00000373672 THOC1Q96FV9 657 aaKnown RBP19.22■□□□□ 0.67
COL16A1-203ENST00000373672 IRAK4Q9NWZ3 460 aa19.22■□□□□ 0.67
COL16A1-203ENST00000373672 BARHL2Q9NY43 387 aa19.22■□□□□ 0.67
COL16A1-203ENST00000373672 L3MBTL1Q9Y468 752 aa19.22■□□□□ 0.67
COL16A1-203ENST00000373672 ZNF335Q9H4Z2 1342 aaPredicted RBP19.22■□□□□ 0.67
COL16A1-203ENST00000373672 TMEM247A6NEH6 219 aa19.22■□□□□ 0.67
COL16A1-203ENST00000373672 KIAA1755Q5JYT7 1200 aa19.22■□□□□ 0.67
COL16A1-203ENST00000373672 C2orf40Q9H1Z8 148 aa19.22■□□□□ 0.67
COL16A1-203ENST00000373672 TMEM260Q9NX78 707 aa19.22■□□□□ 0.67
COL16A1-203ENST00000373672 DDX56Q9NY93 547 aaKnown RBP19.22■□□□□ 0.67
COL16A1-203ENST00000373672 MINPP1Q9UNW1 487 aa19.22■□□□□ 0.67
COL16A1-203ENST00000373672 INPP5FQ9Y2H2 1132 aa19.22■□□□□ 0.67
COL16A1-203ENST00000373672 PLEKHG2Q9H7P9 1386 aa19.22■□□□□ 0.67
COL16A1-203ENST00000373672 P4HBP07237 508 aaKnown RBP19.22■□□□□ 0.67
COL16A1-203ENST00000373672 MAGOHP61326 146 aaKnown RBP19.22■□□□□ 0.67
COL16A1-203ENST00000373672 PPP2R2AP63151 447 aa19.22■□□□□ 0.67
COL16A1-203ENST00000373672 ZBTB41Q5SVQ8 909 aa19.22■□□□□ 0.67
COL16A1-203ENST00000373672 BEND6Q5SZJ8 279 aaPredicted RBP19.22■□□□□ 0.67
COL16A1-203ENST00000373672 ELMSAN1Q6PJG2 1045 aa19.22■□□□□ 0.67
COL16A1-203ENST00000373672 HEY1Q9Y5J3 304 aa19.22■□□□□ 0.67
COL16A1-203ENST00000373672 DENND3A2RUS2 1198 aa19.22■□□□□ 0.67
COL16A1-203ENST00000373672 FAM187AA6NFU0 413 aa19.22■□□□□ 0.67
COL16A1-203ENST00000373672 SMARCA1P28370 1054 aa19.22■□□□□ 0.67
COL16A1-203ENST00000373672 PRDX5P30044 214 aa19.22■□□□□ 0.67
COL16A1-203ENST00000373672 TXNRD1Q16881 649 aa19.22■□□□□ 0.67
COL16A1-203ENST00000373672 RNF217Q8TC41 542 aa19.22■□□□□ 0.67
COL16A1-203ENST00000373672 NSUN6Q8TEA1 469 aaKnown RBP19.22■□□□□ 0.67
COL16A1-203ENST00000373672 POLR3CQ9BUI4 534 aaPredicted RBP19.22■□□□□ 0.67
COL16A1-203ENST00000373672 MROH7-TTC4A0A0A0MT08 1334 aa19.21■□□□□ 0.67
COL16A1-203ENST00000373672 PI4K2BG5E9Z4 385 aa19.21■□□□□ 0.67
COL16A1-203ENST00000373672 M0QYV0 167 aa19.21■□□□□ 0.67
COL16A1-203ENST00000373672 FAM47EQ6ZV65 393 aa19.21■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms