RNA–Protein interactions for RNA: ENST00000373463.7

TMEM54-202, Transcript of transmembrane protein 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM54, Length 999 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM54-202ENST00000373463 KIAA1024Q9UPX6 916 aa23.66■■□□□ 1.38
TMEM54-202ENST00000373463 ADGRA3Q8IWK6 1321 aa23.65■■□□□ 1.38
TMEM54-202ENST00000373463 VWA3AA6NCI4 1184 aa23.65■■□□□ 1.38
TMEM54-202ENST00000373463 SRGAP2CP0DJJ0 459 aa23.65■■□□□ 1.38
TMEM54-202ENST00000373463 GLRA2P23416 452 aa23.65■■□□□ 1.38
TMEM54-202ENST00000373463 SF3A1Q15459 793 aaKnown RBP23.65■■□□□ 1.38
TMEM54-202ENST00000373463 ARL6IP4Q66PJ3 421 aaKnown RBP23.65■■□□□ 1.38
TMEM54-202ENST00000373463 C1orf112Q9NSG2 853 aa23.65■■□□□ 1.38
TMEM54-202ENST00000373463 DDX19AQ9NUU7 478 aaKnown RBP23.65■■□□□ 1.38
TMEM54-202ENST00000373463 RNF19AQ9NV58 838 aa23.65■■□□□ 1.38
TMEM54-202ENST00000373463 MYH15Q9Y2K3 1946 aa23.65■■□□□ 1.38
TMEM54-202ENST00000373463 STX6O43752 255 aa23.64■■□□□ 1.37
TMEM54-202ENST00000373463 IBSPP21815 317 aaPredicted RBP23.64■■□□□ 1.37
TMEM54-202ENST00000373463 CAPSQ13938 189 aa23.64■■□□□ 1.37
TMEM54-202ENST00000373463 PTPAQ15257 358 aa23.64■■□□□ 1.37
TMEM54-202ENST00000373463 RNF149Q8NC42 400 aa23.64■■□□□ 1.37
TMEM54-202ENST00000373463 MAFAQ8NHW3 353 aaPredicted RBP23.64■■□□□ 1.37
TMEM54-202ENST00000373463 PNMA5Q96PV4 448 aa23.64■■□□□ 1.37
TMEM54-202ENST00000373463 RAB34Q9BZG1 259 aa23.64■■□□□ 1.37
TMEM54-202ENST00000373463 POLR3FQ9H1D9 316 aaPredicted RBP23.64■■□□□ 1.37
TMEM54-202ENST00000373463 CLIC4Q9Y696 253 aa23.64■■□□□ 1.37
TMEM54-202ENST00000373463 E9PMD0 336 aa23.63■■□□□ 1.37
TMEM54-202ENST00000373463 ATF7P17544 494 aaPredicted RBP23.63■■□□□ 1.37
TMEM54-202ENST00000373463 GRB10Q13322 594 aa23.63■■□□□ 1.37
TMEM54-202ENST00000373463 PADI6Q6TGC4 694 aa23.63■■□□□ 1.37
TMEM54-202ENST00000373463 MAEAQ7L5Y9 396 aa23.63■■□□□ 1.37
TMEM54-202ENST00000373463 GDPD5Q8WTR4 605 aa23.63■■□□□ 1.37
TMEM54-202ENST00000373463 CCDC43Q96MW1 224 aaKnown RBP23.63■■□□□ 1.37
TMEM54-202ENST00000373463 GAS2L1Q99501 681 aaPredicted RBP23.63■■□□□ 1.37
TMEM54-202ENST00000373463 BHMT2Q9H2M3 363 aa23.63■■□□□ 1.37
TMEM54-202ENST00000373463 ASAP2O43150 1006 aa23.62■■□□□ 1.37
TMEM54-202ENST00000373463 STAG3L1P0CL83 205 aa23.62■■□□□ 1.37
TMEM54-202ENST00000373463 SFPQP23246 707 aaKnown RBP eCLIP23.62■■□□□ 1.37
TMEM54-202ENST00000373463 PTENP60484 403 aa23.62■■□□□ 1.37
TMEM54-202ENST00000373463 HYIQ5T013 277 aa23.62■■□□□ 1.37
TMEM54-202ENST00000373463 FAM102BQ5T8I3 360 aa23.62■■□□□ 1.37
TMEM54-202ENST00000373463 SRGAP1Q7Z6B7 1085 aa23.62■■□□□ 1.37
TMEM54-202ENST00000373463 IFNLR1Q8IU57 520 aaPredicted RBP23.62■■□□□ 1.37
TMEM54-202ENST00000373463 LRRC15Q8TF66 581 aa23.62■■□□□ 1.37
TMEM54-202ENST00000373463 BSNDQ8WZ55 320 aa23.62■■□□□ 1.37
TMEM54-202ENST00000373463 TMEM161AQ9NX61 479 aa23.62■■□□□ 1.37
TMEM54-202ENST00000373463 PRRC2BQ5JSZ5 2229 aaKnown RBP23.61■■□□□ 1.37
TMEM54-202ENST00000373463 ATG2AQ2TAZ0 1938 aa23.61■■□□□ 1.37
TMEM54-202ENST00000373463 REV3LO60673 3130 aa23.61■■□□□ 1.37
TMEM54-202ENST00000373463 ARHGEF35A5YM69 484 aa23.61■■□□□ 1.37
TMEM54-202ENST00000373463 FGFR1P11362 822 aa23.61■■□□□ 1.37
TMEM54-202ENST00000373463 CYP11B2P19099 503 aa23.61■■□□□ 1.37
TMEM54-202ENST00000373463 POU3F3P20264 500 aaPredicted RBP23.61■■□□□ 1.37
TMEM54-202ENST00000373463 HOXA11P31270 313 aaPredicted RBP23.61■■□□□ 1.37
TMEM54-202ENST00000373463 BTG3Q14201 252 aaPredicted RBP23.61■■□□□ 1.37
TMEM54-202ENST00000373463 MXD4Q14582 209 aaPredicted RBP23.61■■□□□ 1.37
TMEM54-202ENST00000373463 PAN2Q504Q3 1202 aaKnown RBP23.61■■□□□ 1.37
TMEM54-202ENST00000373463 EPC2Q52LR7 807 aa23.61■■□□□ 1.37
TMEM54-202ENST00000373463 KRT79Q5XKE5 535 aa23.61■■□□□ 1.37
TMEM54-202ENST00000373463 CATSPER4Q7RTX7 472 aa23.61■■□□□ 1.37
TMEM54-202ENST00000373463 ZNF598Q86UK7 904 aaKnown RBP23.61■■□□□ 1.37
TMEM54-202ENST00000373463 ECHDC2Q86YB7 292 aa23.61■■□□□ 1.37
TMEM54-202ENST00000373463 CMTR2Q8IYT2 770 aaKnown RBP23.61■■□□□ 1.37
TMEM54-202ENST00000373463 FIBCD1Q8N539 461 aa23.61■■□□□ 1.37
TMEM54-202ENST00000373463 CLP1Q92989 425 aaKnown RBP23.61■■□□□ 1.37
TMEM54-202ENST00000373463 INO80BQ9C086 356 aaPredicted RBP23.61■■□□□ 1.37
TMEM54-202ENST00000373463 ELAC1Q9H777 363 aaKnown RBP23.61■■□□□ 1.37
TMEM54-202ENST00000373463 POLD4Q9HCU8 107 aa23.61■■□□□ 1.37
TMEM54-202ENST00000373463 HCSTQ9UBK5 93 aa23.61■■□□□ 1.37
TMEM54-202ENST00000373463 PCDHB7Q9Y5E2 793 aa23.61■■□□□ 1.37
TMEM54-202ENST00000373463 MTCH2Q9Y6C9 303 aa23.61■■□□□ 1.37
TMEM54-202ENST00000373463 STK24Q9Y6E0 443 aa23.61■■□□□ 1.37
TMEM54-202ENST00000373463 MRPL42Q9Y6G3 142 aaKnown RBP23.61■■□□□ 1.37
TMEM54-202ENST00000373463 EYA4O95677 639 aa23.6■■□□□ 1.37
TMEM54-202ENST00000373463 ZSCAN20P17040 1043 aaPredicted RBP23.6■■□□□ 1.37
TMEM54-202ENST00000373463 IGFBP4P22692 258 aa23.6■■□□□ 1.37
TMEM54-202ENST00000373463 POU5F1BQ06416 359 aa23.6■■□□□ 1.37
TMEM54-202ENST00000373463 AMHR2Q16671 573 aa23.6■■□□□ 1.37
TMEM54-202ENST00000373463 TMEM192Q8IY95 271 aa23.6■■□□□ 1.37
TMEM54-202ENST00000373463 MCPH1Q8NEM0 835 aa23.6■■□□□ 1.37
TMEM54-202ENST00000373463 CHST12Q9NRB3 414 aa23.6■■□□□ 1.37
TMEM54-202ENST00000373463 AGPAT5Q9NUQ2 364 aa23.6■■□□□ 1.37
TMEM54-202ENST00000373463 LRFN2Q9ULH4 789 aa23.6■■□□□ 1.37
TMEM54-202ENST00000373463 PIN4Q9Y237 131 aaKnown RBP23.6■■□□□ 1.37
TMEM54-202ENST00000373463 A0A0U1RQF3 1178 aa23.59■■□□□ 1.37
TMEM54-202ENST00000373463 BMP15O95972 392 aa23.59■■□□□ 1.37
TMEM54-202ENST00000373463 PHKA2P46019 1235 aa23.59■■□□□ 1.37
TMEM54-202ENST00000373463 MBTD1Q05BQ5 628 aa23.59■■□□□ 1.37
TMEM54-202ENST00000373463 TMEM119Q4V9L6 283 aa23.59■■□□□ 1.37
TMEM54-202ENST00000373463 SPRYD3Q8NCJ5 442 aa23.59■■□□□ 1.37
TMEM54-202ENST00000373463 FBXO22Q8NEZ5 403 aa23.59■■□□□ 1.37
TMEM54-202ENST00000373463 USP28Q96RU2 1077 aa23.59■■□□□ 1.37
TMEM54-202ENST00000373463 TRAIPQ9BWF2 469 aa23.59■■□□□ 1.37
TMEM54-202ENST00000373463 PRUNE2Q8WUY3 3088 aa23.58■■□□□ 1.37
TMEM54-202ENST00000373463 PKP1Q13835 747 aa23.58■■□□□ 1.37
TMEM54-202ENST00000373463 CLLU1OSQ5K130 101 aa23.58■■□□□ 1.37
TMEM54-202ENST00000373463 UBXN11Q5T124 520 aa23.58■■□□□ 1.37
TMEM54-202ENST00000373463 SAMD11Q96NU1 681 aa23.58■■□□□ 1.37
TMEM54-202ENST00000373463 PLIN2Q99541 437 aa23.58■■□□□ 1.37
TMEM54-202ENST00000373463 RUSC1Q9BVN2 902 aa23.58■■□□□ 1.37
TMEM54-202ENST00000373463 NFKBIZQ9BYH8 718 aa23.58■■□□□ 1.37
TMEM54-202ENST00000373463 FBXO2Q9UK22 296 aaPredicted RBP23.58■■□□□ 1.37
TMEM54-202ENST00000373463 MEIS3P2A8K0S8 358 aa23.57■■□□□ 1.36
TMEM54-202ENST00000373463 TSPAN1O60635 241 aa23.57■■□□□ 1.36
TMEM54-202ENST00000373463 BMPR1AP36894 532 aa23.57■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms