RNA–Protein interactions for RNA: ENST00000373253.7

NCDN-203, Transcript of neurochondrin, humanhuman

TSL 1 (best) BASIC

Gene NCDN, Length 3,677 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCDN-203ENST00000373253 LRRIQ3A6PVS8 624 aaPredicted RBP14.31□□□□□ -0.12
NCDN-203ENST00000373253 TLR2O60603 784 aa14.31□□□□□ -0.12
NCDN-203ENST00000373253 PGK2P07205 417 aa14.31□□□□□ -0.12
NCDN-203ENST00000373253 MYBL2P10244 700 aa14.31□□□□□ -0.12
NCDN-203ENST00000373253 VAMP7P51809 220 aa14.31□□□□□ -0.12
NCDN-203ENST00000373253 THNSL1Q8IYQ7 743 aa14.31□□□□□ -0.12
NCDN-203ENST00000373253 XXYLT1Q8NBI6 393 aa14.31□□□□□ -0.12
NCDN-203ENST00000373253 CASZ1Q86V15 1759 aa14.31□□□□□ -0.12
NCDN-203ENST00000373253 TNRC6CQ9HCJ0 1690 aaKnown RBP14.31□□□□□ -0.12
NCDN-203ENST00000373253 TMOD1P28289 359 aa14.3□□□□□ -0.12
NCDN-203ENST00000373253 RSRC2Q7L4I2 434 aaKnown RBP14.3□□□□□ -0.12
NCDN-203ENST00000373253 OTUD6AQ7L8S5 288 aa14.3□□□□□ -0.12
NCDN-203ENST00000373253 SH2D3CQ8N5H7 860 aa14.3□□□□□ -0.12
NCDN-203ENST00000373253 ZNF280CQ8ND82 737 aa14.3□□□□□ -0.12
NCDN-203ENST00000373253 DHX38Q92620 1227 aaKnown RBP14.3□□□□□ -0.12
NCDN-203ENST00000373253 CELF4Q9BZC1 486 aaKnown RBP14.3□□□□□ -0.12
NCDN-203ENST00000373253 WDR64B1ANS9 1081 aa14.3□□□□□ -0.12
NCDN-203ENST00000373253 TRADDQ15628 312 aa14.3□□□□□ -0.12
NCDN-203ENST00000373253 UGCGQ16739 394 aa14.3□□□□□ -0.12
NCDN-203ENST00000373253 CEP85LQ5SZL2 805 aa14.3□□□□□ -0.12
NCDN-203ENST00000373253 TRAPPC11Q7Z392 1133 aa14.3□□□□□ -0.12
NCDN-203ENST00000373253 SLC20A1Q8WUM9 679 aa14.3□□□□□ -0.12
NCDN-203ENST00000373253 LMBR1Q8WVP7 490 aa14.3□□□□□ -0.12
NCDN-203ENST00000373253 LENG9Q96B70 501 aa14.3□□□□□ -0.12
NCDN-203ENST00000373253 AS3MTQ9HBK9 375 aa14.3□□□□□ -0.12
NCDN-203ENST00000373253 INO80B-WBP1J3KQ70 363 aa14.3□□□□□ -0.12
NCDN-203ENST00000373253 FTLP02792 175 aaPredicted RBP14.3□□□□□ -0.12
NCDN-203ENST00000373253 ICAM1P05362 532 aa14.3□□□□□ -0.12
NCDN-203ENST00000373253 CARSP49589 748 aaKnown RBP14.3□□□□□ -0.12
NCDN-203ENST00000373253 GNPTABQ3T906 1256 aa14.3□□□□□ -0.12
NCDN-203ENST00000373253 SLC35C1Q96A29 364 aa14.3□□□□□ -0.12
NCDN-203ENST00000373253 INO80BQ9C086 356 aaPredicted RBP14.3□□□□□ -0.12
NCDN-203ENST00000373253 HSPBP1Q9NZL4 362 aa14.3□□□□□ -0.12
NCDN-203ENST00000373253 CCDC88AQ3V6T2 1871 aa14.3□□□□□ -0.12
NCDN-203ENST00000373253 WDR44Q5JSH3 913 aa14.29□□□□□ -0.12
NCDN-203ENST00000373253 KAZNQ674X7 775 aa14.29□□□□□ -0.12
NCDN-203ENST00000373253 ZNF720Q7Z2F6 126 aa14.29□□□□□ -0.12
NCDN-203ENST00000373253 IFT20Q8IY31 132 aa14.29□□□□□ -0.12
NCDN-203ENST00000373253 CCDC105Q8IYK2 499 aa14.29□□□□□ -0.12
NCDN-203ENST00000373253 RPUSD2Q8IZ73 545 aaKnown RBP14.29□□□□□ -0.12
NCDN-203ENST00000373253 AFAP1L1Q8TED9 768 aa14.29□□□□□ -0.12
NCDN-203ENST00000373253 BAP1Q92560 729 aa14.29□□□□□ -0.12
NCDN-203ENST00000373253 DCPSQ96C86 337 aaKnown RBP14.29□□□□□ -0.12
NCDN-203ENST00000373253 ZNF653Q96CK0 615 aa14.29□□□□□ -0.12
NCDN-203ENST00000373253 RNF181Q9P0P0 153 aa14.29□□□□□ -0.12
NCDN-203ENST00000373253 NXF1Q9UBU9 619 aaKnown RBP14.29□□□□□ -0.12
NCDN-203ENST00000373253 ERLIN2O94905 339 aa14.29□□□□□ -0.12
NCDN-203ENST00000373253 OR2W6PQ8NHA6 318 aa14.29□□□□□ -0.12
NCDN-203ENST00000373253 FAM76AQ8TAV0 307 aa14.29□□□□□ -0.12
NCDN-203ENST00000373253 AZI2Q9H6S1 392 aa14.29□□□□□ -0.12
NCDN-203ENST00000373253 SYNCQ9H7C4 482 aa14.29□□□□□ -0.12
NCDN-203ENST00000373253 TBX3O15119 743 aa14.29□□□□□ -0.12
NCDN-203ENST00000373253 Q4G0T1 1027 aa14.29□□□□□ -0.12
NCDN-203ENST00000373253 MCTP2Q6DN12 878 aa14.29□□□□□ -0.12
NCDN-203ENST00000373253 PPP4R3CPQ6ZMV5 832 aa14.29□□□□□ -0.12
NCDN-203ENST00000373253 LRRC71Q8N4P6 559 aa14.29□□□□□ -0.12
NCDN-203ENST00000373253 TRPM4Q8TD43 1214 aa14.29□□□□□ -0.12
NCDN-203ENST00000373253 HEMGNQ9BXL5 484 aa14.29□□□□□ -0.12
NCDN-203ENST00000373253 KCTD10Q9H3F6 313 aa14.29□□□□□ -0.12
NCDN-203ENST00000373253 NAGPAQ9UK23 515 aa14.29□□□□□ -0.12
NCDN-203ENST00000373253 VAV3Q9UKW4 847 aa14.29□□□□□ -0.12
NCDN-203ENST00000373253 WDR46O15213 610 aaKnown RBP14.28□□□□□ -0.12
NCDN-203ENST00000373253 BUB1BO60566 1050 aaPredicted RBP14.28□□□□□ -0.12
NCDN-203ENST00000373253 KRT14P02533 472 aa14.28□□□□□ -0.12
NCDN-203ENST00000373253 FERP16591 822 aa14.28□□□□□ -0.12
NCDN-203ENST00000373253 TFAMQ00059 246 aaKnown RBP14.28□□□□□ -0.12
NCDN-203ENST00000373253 SETQ01105 290 aaPredicted RBP14.28□□□□□ -0.12
NCDN-203ENST00000373253 ITGB3BPQ13352 177 aaPredicted RBP14.28□□□□□ -0.12
NCDN-203ENST00000373253 MTM1Q13496 603 aa14.28□□□□□ -0.12
NCDN-203ENST00000373253 PPP1R7Q15435 360 aa14.28□□□□□ -0.12
NCDN-203ENST00000373253 BEND6Q5SZJ8 279 aaPredicted RBP14.28□□□□□ -0.12
NCDN-203ENST00000373253 FRMD5Q7Z6J6 570 aa14.28□□□□□ -0.12
NCDN-203ENST00000373253 TRIM50Q86XT4 487 aa14.28□□□□□ -0.12
NCDN-203ENST00000373253 TELO2Q9Y4R8 837 aa14.28□□□□□ -0.12
NCDN-203ENST00000373253 GOLGA6L10A0A0M3HER8 536 aa14.28□□□□□ -0.12
NCDN-203ENST00000373253 H0YHG0 523 aa14.28□□□□□ -0.12
NCDN-203ENST00000373253 PSMD10O75832 226 aa14.28□□□□□ -0.12
NCDN-203ENST00000373253 CCND2P30279 289 aa14.28□□□□□ -0.12
NCDN-203ENST00000373253 SLCO1A2P46721 670 aa14.28□□□□□ -0.12
NCDN-203ENST00000373253 PLTPP55058 493 aa14.28□□□□□ -0.12
NCDN-203ENST00000373253 BFSP1Q12934 665 aa14.28□□□□□ -0.12
NCDN-203ENST00000373253 TUBB2AQ13885 445 aa14.28□□□□□ -0.12
NCDN-203ENST00000373253 NLGN2Q8NFZ4 835 aa14.28□□□□□ -0.12
NCDN-203ENST00000373253 NSUN6Q8TEA1 469 aaKnown RBP14.28□□□□□ -0.12
NCDN-203ENST00000373253 SLC7A3Q8WY07 619 aa14.28□□□□□ -0.12
NCDN-203ENST00000373253 TUBB2BQ9BVA1 445 aa14.28□□□□□ -0.12
NCDN-203ENST00000373253 TAS2R14Q9NYV8 317 aa14.28□□□□□ -0.12
NCDN-203ENST00000373253 PCDHA10Q9Y5I2 948 aa14.28□□□□□ -0.12
NCDN-203ENST00000373253 MYH1P12882 1939 aa14.28□□□□□ -0.12
NCDN-203ENST00000373253 K7ERI5 159 aa14.28□□□□□ -0.12
NCDN-203ENST00000373253 TGFB1I1O43294 461 aa14.28□□□□□ -0.12
NCDN-203ENST00000373253 ZSCAN26Q16670 478 aa14.28□□□□□ -0.12
NCDN-203ENST00000373253 EDRF1Q3B7T1 1238 aa14.28□□□□□ -0.12
NCDN-203ENST00000373253 Q3C1V9 767 aa14.28□□□□□ -0.12
NCDN-203ENST00000373253 RNF187Q5TA31 235 aaPredicted RBP14.28□□□□□ -0.12
NCDN-203ENST00000373253 AGBL3Q8NEM8 1001 aa14.28□□□□□ -0.12
NCDN-203ENST00000373253 ATP6V0A1Q93050 837 aa14.28□□□□□ -0.12
NCDN-203ENST00000373253 CAMKK2Q96RR4 588 aa14.28□□□□□ -0.12
NCDN-203ENST00000373253 HSD17B14Q9BPX1 270 aa14.28□□□□□ -0.12
NCDN-203ENST00000373253 PDCD2LQ9BRP1 358 aa14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 213.4 ms