RNA–Protein interactions for RNA: ENST00000372621.8

CTPS1-202, Transcript of CTP synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTPS1, Length 3,201 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTPS1-202ENST00000372621 KCND2Q9NZV8 630 aa13.84□□□□□ -0.19
CTPS1-202ENST00000372621 ODF2LQ9ULJ1 636 aa13.84□□□□□ -0.19
CTPS1-202ENST00000372621 COL2A1P02458 1487 aaPredicted RBP13.83□□□□□ -0.19
CTPS1-202ENST00000372621 PRELPP51888 382 aa13.83□□□□□ -0.19
CTPS1-202ENST00000372621 RBM5P52756 815 aaKnown RBP eCLIP13.83□□□□□ -0.19
CTPS1-202ENST00000372621 KIF22Q14807 665 aa13.83□□□□□ -0.19
CTPS1-202ENST00000372621 B3GNT9Q6UX72 402 aa13.83□□□□□ -0.19
CTPS1-202ENST00000372621 PALB2Q86YC2 1186 aa13.83□□□□□ -0.19
CTPS1-202ENST00000372621 SLC9A9Q8IVB4 645 aa13.83□□□□□ -0.19
CTPS1-202ENST00000372621 TAS2R14Q9NYV8 317 aa13.83□□□□□ -0.19
CTPS1-202ENST00000372621 COG5Q9UP83 839 aa13.83□□□□□ -0.19
CTPS1-202ENST00000372621 HPDP32754 393 aaPredicted RBP13.83□□□□□ -0.2
CTPS1-202ENST00000372621 KIAA1755Q5JYT7 1200 aa13.83□□□□□ -0.2
CTPS1-202ENST00000372621 SPDYCQ5MJ68 293 aa13.83□□□□□ -0.2
CTPS1-202ENST00000372621 PHLDB3Q6NSJ2 640 aa13.83□□□□□ -0.2
CTPS1-202ENST00000372621 CTNNBL1Q8WYA6 563 aaPredicted RBP13.83□□□□□ -0.2
CTPS1-202ENST00000372621 FRMD4BQ9Y2L6 1034 aa13.83□□□□□ -0.2
CTPS1-202ENST00000372621 UTP11Q9Y3A2 253 aaKnown RBP13.83□□□□□ -0.2
CTPS1-202ENST00000372621 CHMP2AO43633 222 aa13.83□□□□□ -0.2
CTPS1-202ENST00000372621 PPFIA2O75334 1257 aa13.83□□□□□ -0.2
CTPS1-202ENST00000372621 FSBPO95073 299 aa13.83□□□□□ -0.2
CTPS1-202ENST00000372621 TRIM49P0CI25 452 aa13.83□□□□□ -0.2
CTPS1-202ENST00000372621 TRIM49CP0CI26 452 aa13.83□□□□□ -0.2
CTPS1-202ENST00000372621 HADHBP55084 474 aaKnown RBP13.83□□□□□ -0.2
CTPS1-202ENST00000372621 RBM26Q5T8P6 1007 aaKnown RBP13.83□□□□□ -0.2
CTPS1-202ENST00000372621 ICE2Q659A1 982 aa13.83□□□□□ -0.2
CTPS1-202ENST00000372621 C6orf89Q6UWU4 347 aa13.83□□□□□ -0.2
CTPS1-202ENST00000372621 FMNL3Q8IVF7 1028 aa13.83□□□□□ -0.2
CTPS1-202ENST00000372621 SUGP1Q8IWZ8 645 aaKnown RBP13.83□□□□□ -0.2
CTPS1-202ENST00000372621 FAM178BQ8IXR5 827 aa13.83□□□□□ -0.2
CTPS1-202ENST00000372621 SPICE1Q8N0Z3 855 aa13.83□□□□□ -0.2
CTPS1-202ENST00000372621 UBLCP1Q8WVY7 318 aaPredicted RBP13.83□□□□□ -0.2
CTPS1-202ENST00000372621 MASTLQ96GX5 879 aa13.83□□□□□ -0.2
CTPS1-202ENST00000372621 THAP2Q9H0W7 228 aa13.83□□□□□ -0.2
CTPS1-202ENST00000372621 CYP2J2P51589 502 aa13.82□□□□□ -0.2
CTPS1-202ENST00000372621 STAT2P52630 851 aa13.82□□□□□ -0.2
CTPS1-202ENST00000372621 DUPD1Q68J44 220 aa13.82□□□□□ -0.2
CTPS1-202ENST00000372621 HS2ST1Q7LGA3 356 aa13.82□□□□□ -0.2
CTPS1-202ENST00000372621 NACC1Q96RE7 527 aa13.82□□□□□ -0.2
CTPS1-202ENST00000372621 LRRC4CQ9HCJ2 640 aa13.82□□□□□ -0.2
CTPS1-202ENST00000372621 ZDHHC18Q9NUE0 388 aa13.82□□□□□ -0.2
CTPS1-202ENST00000372621 ANKRD62A6NC57 917 aa13.82□□□□□ -0.2
CTPS1-202ENST00000372621 ENTPD3O75355 529 aa13.82□□□□□ -0.2
CTPS1-202ENST00000372621 PAEPP09466 180 aa13.82□□□□□ -0.2
CTPS1-202ENST00000372621 CCDC172P0C7W6 258 aa13.82□□□□□ -0.2
CTPS1-202ENST00000372621 ABCB4P21439 1286 aa13.82□□□□□ -0.2
CTPS1-202ENST00000372621 BFSP1Q12934 665 aa13.82□□□□□ -0.2
CTPS1-202ENST00000372621 MAPK7Q13164 816 aa13.82□□□□□ -0.2
CTPS1-202ENST00000372621 MMS22LQ6ZRQ5 1243 aa13.82□□□□□ -0.2
CTPS1-202ENST00000372621 C3orf20Q8ND61 904 aa13.82□□□□□ -0.2
CTPS1-202ENST00000372621 TMEM174Q8WUU8 243 aa13.82□□□□□ -0.2
CTPS1-202ENST00000372621 TRIM51Q9BSJ1 452 aa13.82□□□□□ -0.2
CTPS1-202ENST00000372621 ERVK-5Q9HDB9 667 aa13.82□□□□□ -0.2
CTPS1-202ENST00000372621 CNOT8Q9UFF9 292 aaKnown RBP13.82□□□□□ -0.2
CTPS1-202ENST00000372621 E7EVH7 732 aa13.81□□□□□ -0.2
CTPS1-202ENST00000372621 TRAPPC3O43617 180 aa13.81□□□□□ -0.2
CTPS1-202ENST00000372621 CFBP00751 764 aa13.81□□□□□ -0.2
CTPS1-202ENST00000372621 RFX1P22670 979 aa13.81□□□□□ -0.2
CTPS1-202ENST00000372621 GUCY2CP25092 1073 aa13.81□□□□□ -0.2
CTPS1-202ENST00000372621 PDE6BP35913 854 aa13.81□□□□□ -0.2
CTPS1-202ENST00000372621 MYL7Q01449 175 aa13.81□□□□□ -0.2
CTPS1-202ENST00000372621 DHX9Q08211 1270 aaKnown RBP13.81□□□□□ -0.2
CTPS1-202ENST00000372621 TCEAL1Q15170 157 aa13.81□□□□□ -0.2
CTPS1-202ENST00000372621 MICALCLQ6ZW33 695 aa13.81□□□□□ -0.2
CTPS1-202ENST00000372621 CNPY4Q8N129 248 aa13.81□□□□□ -0.2
CTPS1-202ENST00000372621 DAW1Q8N136 415 aa13.81□□□□□ -0.2
CTPS1-202ENST00000372621 PRPF38AQ8NAV1 312 aaKnown RBP13.81□□□□□ -0.2
CTPS1-202ENST00000372621 CENPHQ9H3R5 247 aa13.81□□□□□ -0.2
CTPS1-202ENST00000372621 UNC45AQ9H3U1 944 aa13.81□□□□□ -0.2
CTPS1-202ENST00000372621 FOXN3O00409 490 aaPredicted RBP13.81□□□□□ -0.2
CTPS1-202ENST00000372621 ECE2O60344 883 aa13.81□□□□□ -0.2
CTPS1-202ENST00000372621 GAS7O60861 476 aa13.81□□□□□ -0.2
CTPS1-202ENST00000372621 VIL1P09327 827 aaKnown RBP13.81□□□□□ -0.2
CTPS1-202ENST00000372621 VCAM1P19320 739 aa13.81□□□□□ -0.2
CTPS1-202ENST00000372621 ECE1P42892 770 aa13.81□□□□□ -0.2
CTPS1-202ENST00000372621 PPP2R2AP63151 447 aa13.81□□□□□ -0.2
CTPS1-202ENST00000372621 MYBPC2Q14324 1141 aa13.81□□□□□ -0.2
CTPS1-202ENST00000372621 PPP2R5EQ16537 467 aa13.81□□□□□ -0.2
CTPS1-202ENST00000372621 CEP55Q53EZ4 464 aa13.81□□□□□ -0.2
CTPS1-202ENST00000372621 ODR4Q5SWX8 454 aa13.81□□□□□ -0.2
CTPS1-202ENST00000372621 STXBP4Q6ZWJ1 553 aa13.81□□□□□ -0.2
CTPS1-202ENST00000372621 BANK1Q8NDB2 785 aa13.81□□□□□ -0.2
CTPS1-202ENST00000372621 ALG3Q92685 438 aa13.81□□□□□ -0.2
CTPS1-202ENST00000372621 DPH5Q9H2P9 285 aa13.81□□□□□ -0.2
CTPS1-202ENST00000372621 EPB41L4BQ9H329 900 aa13.81□□□□□ -0.2
CTPS1-202ENST00000372621 TDRD3Q9H7E2 651 aaKnown RBP13.81□□□□□ -0.2
CTPS1-202ENST00000372621 DCDC2CA8MYV0 355 aa13.81□□□□□ -0.2
CTPS1-202ENST00000372621 TNFAIP3P21580 790 aa13.81□□□□□ -0.2
CTPS1-202ENST00000372621 NLGN1Q8N2Q7 840 aa13.81□□□□□ -0.2
CTPS1-202ENST00000372621 OTUD6BQ8N6M0 293 aa13.81□□□□□ -0.2
CTPS1-202ENST00000372621 CYFIP2Q96F07 1278 aa13.81□□□□□ -0.2
CTPS1-202ENST00000372621 RAB17Q9H0T7 212 aa13.81□□□□□ -0.2
CTPS1-202ENST00000372621 GMNCA6NCL1 334 aa13.8□□□□□ -0.2
CTPS1-202ENST00000372621 KIAA0754O94854 1291 aa13.8□□□□□ -0.2
CTPS1-202ENST00000372621 POLR2MP0CAP2 368 aa13.8□□□□□ -0.2
CTPS1-202ENST00000372621 TRAF1Q13077 416 aa13.8□□□□□ -0.2
CTPS1-202ENST00000372621 FBXW10Q5XX13 1052 aa13.8□□□□□ -0.2
CTPS1-202ENST00000372621 KCNV1Q6PIU1 500 aa13.8□□□□□ -0.2
CTPS1-202ENST00000372621 NAP1L3Q99457 506 aaPredicted RBP13.8□□□□□ -0.2
CTPS1-202ENST00000372621 AGPAT1Q99943 283 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms