RNA–Protein interactions for RNA: ENST00000372066.7

LDB3-204, Transcript of LIM domain binding 3, humanhuman

TSL 1 (best) BASIC

Gene LDB3, Length 1,598 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-204ENST00000372066 ATP2A1O14983 1001 aa15.44■□□□□ 0.06
LDB3-204ENST00000372066 KIAA0355O15063 1070 aa15.44■□□□□ 0.06
LDB3-204ENST00000372066 SLC16A3O15427 465 aaKnown RBP15.44■□□□□ 0.06
LDB3-204ENST00000372066 ADAMTS4O75173 837 aa15.44■□□□□ 0.06
LDB3-204ENST00000372066 RPL13P26373 211 aaKnown RBP15.44■□□□□ 0.06
LDB3-204ENST00000372066 SMAD3P84022 425 aaKnown RBP15.44■□□□□ 0.06
LDB3-204ENST00000372066 EPHA7Q15375 998 aa15.44■□□□□ 0.06
LDB3-204ENST00000372066 NFIL3Q16649 462 aa15.44■□□□□ 0.06
LDB3-204ENST00000372066 WHAMMP3Q1A5X7 153 aa15.44■□□□□ 0.06
LDB3-204ENST00000372066 ERCC6LQ2NKX8 1250 aa15.44■□□□□ 0.06
LDB3-204ENST00000372066 MAMDC4Q6UXC1 1216 aa15.44■□□□□ 0.06
LDB3-204ENST00000372066 STXBP4Q6ZWJ1 553 aa15.44■□□□□ 0.06
LDB3-204ENST00000372066 FRMD5Q7Z6J6 570 aa15.44■□□□□ 0.06
LDB3-204ENST00000372066 KIAA1328Q86T90 577 aa15.44■□□□□ 0.06
LDB3-204ENST00000372066 SFR1Q86XK3 245 aa15.44■□□□□ 0.06
LDB3-204ENST00000372066 PHF6Q8IWS0 365 aaKnown RBP eCLIP15.44■□□□□ 0.06
LDB3-204ENST00000372066 ANKRD35Q8N283 1001 aa15.44■□□□□ 0.06
LDB3-204ENST00000372066 SLC35F6Q8N357 371 aa15.44■□□□□ 0.06
LDB3-204ENST00000372066 GPR161Q8N6U8 529 aaKnown RBP15.44■□□□□ 0.06
LDB3-204ENST00000372066 GOLGA1Q92805 767 aa15.44■□□□□ 0.06
LDB3-204ENST00000372066 MXRA8Q9BRK3 442 aa15.44■□□□□ 0.06
LDB3-204ENST00000372066 ZNF577Q9BSK1 485 aa15.44■□□□□ 0.06
LDB3-204ENST00000372066 STARD7Q9NQZ5 370 aa15.44■□□□□ 0.06
LDB3-204ENST00000372066 TYW1Q9NV66 732 aaKnown RBP15.44■□□□□ 0.06
LDB3-204ENST00000372066 CEP72Q9P209 647 aa15.44■□□□□ 0.06
LDB3-204ENST00000372066 REXO2Q9Y3B8 237 aaKnown RBP15.44■□□□□ 0.06
LDB3-204ENST00000372066 UTP18Q9Y5J1 556 aaKnown RBP eCLIP15.44■□□□□ 0.06
LDB3-204ENST00000372066 DCDC2CA8MYV0 355 aa15.43■□□□□ 0.06
LDB3-204ENST00000372066 EML1O00423 815 aa15.43■□□□□ 0.06
LDB3-204ENST00000372066 LCA5LO95447 670 aa15.43■□□□□ 0.06
LDB3-204ENST00000372066 ACLYP53396 1101 aa15.43■□□□□ 0.06
LDB3-204ENST00000372066 PSMC6P62333 389 aa15.43■□□□□ 0.06
LDB3-204ENST00000372066 SPA17Q15506 151 aa15.43■□□□□ 0.06
LDB3-204ENST00000372066 KCNA10Q16322 511 aa15.43■□□□□ 0.06
LDB3-204ENST00000372066 B3GNT9Q6UX72 402 aa15.43■□□□□ 0.06
LDB3-204ENST00000372066 RSRC2Q7L4I2 434 aaKnown RBP15.43■□□□□ 0.06
LDB3-204ENST00000372066 SRGAP1Q7Z6B7 1085 aa15.43■□□□□ 0.06
LDB3-204ENST00000372066 RABGGTAQ92696 567 aa15.43■□□□□ 0.06
LDB3-204ENST00000372066 JAKMIP2Q96AA8 810 aa15.43■□□□□ 0.06
LDB3-204ENST00000372066 EEF2KMTQ96G04 330 aa15.43■□□□□ 0.06
LDB3-204ENST00000372066 RNPC3Q96LT9 517 aaKnown RBP15.43■□□□□ 0.06
LDB3-204ENST00000372066 CCDC42Q96M95 316 aa15.43■□□□□ 0.06
LDB3-204ENST00000372066 NACC1Q96RE7 527 aa15.43■□□□□ 0.06
LDB3-204ENST00000372066 BHMT2Q9H2M3 363 aa15.43■□□□□ 0.06
LDB3-204ENST00000372066 MMRN2Q9H8L6 949 aa15.43■□□□□ 0.06
LDB3-204ENST00000372066 METTL14Q9HCE5 456 aaKnown RBP15.43■□□□□ 0.06
LDB3-204ENST00000372066 ODF2LQ9ULJ1 636 aa15.43■□□□□ 0.06
LDB3-204ENST00000372066 ZNF536O15090 1300 aa15.42■□□□□ 0.06
LDB3-204ENST00000372066 NPHP3-ACAD11A0A0J9YXS1 232 aa15.42■□□□□ 0.06
LDB3-204ENST00000372066 SSU72P8A0A1W2PR75 194 aa15.42■□□□□ 0.06
LDB3-204ENST00000372066 MOXD2PA6NHM9 499 aa15.42■□□□□ 0.06
LDB3-204ENST00000372066 USO1O60763 962 aaKnown RBP15.42■□□□□ 0.06
LDB3-204ENST00000372066 KLK7P49862 253 aa15.42■□□□□ 0.06
LDB3-204ENST00000372066 VAV2P52735 878 aa15.42■□□□□ 0.06
LDB3-204ENST00000372066 EPHB4P54760 987 aa15.42■□□□□ 0.06
LDB3-204ENST00000372066 CYP4A11Q02928 519 aa15.42■□□□□ 0.06
LDB3-204ENST00000372066 ADAM9Q13443 819 aa15.42■□□□□ 0.06
LDB3-204ENST00000372066 ACVR2BQ13705 512 aa15.42■□□□□ 0.06
LDB3-204ENST00000372066 RINT1Q6NUQ1 792 aa15.42■□□□□ 0.06
LDB3-204ENST00000372066 PDXDC1Q6P996 788 aa15.42■□□□□ 0.06
LDB3-204ENST00000372066 FBXO38Q6PIJ6 1188 aa15.42■□□□□ 0.06
LDB3-204ENST00000372066 CACNA2D4Q7Z3S7 1137 aa15.42■□□□□ 0.06
LDB3-204ENST00000372066 ZNF467Q7Z7K2 595 aaPredicted RBP15.42■□□□□ 0.06
LDB3-204ENST00000372066 NELFCDQ8IXH7 590 aa15.42■□□□□ 0.06
LDB3-204ENST00000372066 KLHDC9Q8NEP7 349 aa15.42■□□□□ 0.06
LDB3-204ENST00000372066 CYP2W1Q8TAV3 490 aa15.42■□□□□ 0.06
LDB3-204ENST00000372066 VTI1AQ96AJ9 217 aa15.42■□□□□ 0.06
LDB3-204ENST00000372066 MAF1Q9H063 256 aa15.42■□□□□ 0.06
LDB3-204ENST00000372066 ZHX3Q9H4I2 956 aa15.42■□□□□ 0.06
LDB3-204ENST00000372066 SLC38A10Q9HBR0 1119 aa15.42■□□□□ 0.06
LDB3-204ENST00000372066 CDKN2AIPQ9NXV6 580 aaPredicted RBP15.42■□□□□ 0.06
LDB3-204ENST00000372066 TBC1D7Q9P0N9 293 aa15.42■□□□□ 0.06
LDB3-204ENST00000372066 NOL12Q9UGY1 213 aaKnown RBP eCLIP15.42■□□□□ 0.06
LDB3-204ENST00000372066 FBXO40Q9UH90 709 aa15.42■□□□□ 0.06
LDB3-204ENST00000372066 V9GYY5 206 aaPredicted RBP15.42■□□□□ 0.06
LDB3-204ENST00000372066 ANO9A1A5B4 782 aa15.41■□□□□ 0.06
LDB3-204ENST00000372066 DUSP11O75319 330 aaKnown RBP15.41■□□□□ 0.06
LDB3-204ENST00000372066 FAM13AO94988 1023 aa15.41■□□□□ 0.06
LDB3-204ENST00000372066 NR2F2P24468 414 aa15.41■□□□□ 0.06
LDB3-204ENST00000372066 FPGSQ05932 587 aa15.41■□□□□ 0.06
LDB3-204ENST00000372066 FAAP100Q0VG06 881 aa15.41■□□□□ 0.06
LDB3-204ENST00000372066 MAPK8IP2Q13387 824 aaPredicted RBP15.41■□□□□ 0.06
LDB3-204ENST00000372066 CCDC122Q5T0U0 273 aa15.41■□□□□ 0.06
LDB3-204ENST00000372066 ANKRD33Q7Z3H0 272 aa15.41■□□□□ 0.06
LDB3-204ENST00000372066 CHST13Q8NET6 341 aa15.41■□□□□ 0.06
LDB3-204ENST00000372066 BAP1Q92560 729 aa15.41■□□□□ 0.06
LDB3-204ENST00000372066 TBC1D5Q92609 795 aa15.41■□□□□ 0.06
LDB3-204ENST00000372066 DYDC2Q96IM9 177 aa15.41■□□□□ 0.06
LDB3-204ENST00000372066 TOX2Q96NM4 488 aa15.41■□□□□ 0.06
LDB3-204ENST00000372066 PURBQ96QR8 312 aaKnown RBP15.41■□□□□ 0.06
LDB3-204ENST00000372066 FGFBP2Q9BYJ0 223 aa15.41■□□□□ 0.06
LDB3-204ENST00000372066 IRX2Q9BZI1 471 aaPredicted RBP15.41■□□□□ 0.06
LDB3-204ENST00000372066 SPC25Q9HBM1 224 aa15.41■□□□□ 0.06
LDB3-204ENST00000372066 COL11A1P12107 1806 aaPredicted RBP15.41■□□□□ 0.06
LDB3-204ENST00000372066 MYADML2A6NDP7 307 aa15.41■□□□□ 0.06
LDB3-204ENST00000372066 IPO5O00410 1097 aaKnown RBP15.41■□□□□ 0.06
LDB3-204ENST00000372066 SLITRK3O94933 977 aa15.41■□□□□ 0.06
LDB3-204ENST00000372066 C6orf222P0C671 652 aaPredicted RBP15.41■□□□□ 0.06
LDB3-204ENST00000372066 ZNF131P52739 623 aa15.41■□□□□ 0.06
LDB3-204ENST00000372066 CACNB1Q02641 598 aaPredicted RBP15.41■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms