RNA–Protein interactions for RNA: ENST00000371447.3

PDE6C-201, Transcript of phosphodiesterase 6C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDE6C, Length 3,307 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6C-201ENST00000371447 CARSP49589 748 aaKnown RBP12.78□□□□□ -0.36
PDE6C-201ENST00000371447 STXBP4Q6ZWJ1 553 aa12.78□□□□□ -0.36
PDE6C-201ENST00000371447 H2AFVQ71UI9 128 aa12.78□□□□□ -0.36
PDE6C-201ENST00000371447 NLRX1Q86UT6 975 aa12.78□□□□□ -0.36
PDE6C-201ENST00000371447 CBWD2Q8IUF1 395 aa12.78□□□□□ -0.36
PDE6C-201ENST00000371447 GOLGA6L1Q8N7Z2 621 aa12.78□□□□□ -0.36
PDE6C-201ENST00000371447 PI4K2AQ9BTU6 479 aa12.78□□□□□ -0.36
PDE6C-201ENST00000371447 FAM204AQ9H8W3 233 aa12.78□□□□□ -0.36
PDE6C-201ENST00000371447 AGO4Q9HCK5 861 aaKnown RBP12.78□□□□□ -0.36
PDE6C-201ENST00000371447 GALCP54803 685 aa12.78□□□□□ -0.36
PDE6C-201ENST00000371447 PPP3CAQ08209 521 aa12.78□□□□□ -0.36
PDE6C-201ENST00000371447 PGM5Q15124 567 aa12.78□□□□□ -0.36
PDE6C-201ENST00000371447 CCNI2Q6ZMN8 369 aaPredicted RBP12.78□□□□□ -0.36
PDE6C-201ENST00000371447 SEPT14Q6ZU15 432 aa12.78□□□□□ -0.36
PDE6C-201ENST00000371447 FAM83AQ86UY5 434 aa12.78□□□□□ -0.36
PDE6C-201ENST00000371447 DDX47Q9H0S4 455 aaKnown RBP12.78□□□□□ -0.36
PDE6C-201ENST00000371447 NUCKS1Q9H1E3 243 aaKnown RBP12.78□□□□□ -0.36
PDE6C-201ENST00000371447 OLFML3Q9NRN5 406 aa12.78□□□□□ -0.36
PDE6C-201ENST00000371447 MAP2K7O14733 419 aa12.78□□□□□ -0.36
PDE6C-201ENST00000371447 RNF40O75150 1001 aa12.78□□□□□ -0.36
PDE6C-201ENST00000371447 TNFAIP1Q13829 316 aa12.78□□□□□ -0.36
PDE6C-201ENST00000371447 MTERF2Q49AM1 385 aa12.78□□□□□ -0.36
PDE6C-201ENST00000371447 MAP9Q49MG5 647 aa12.78□□□□□ -0.36
PDE6C-201ENST00000371447 SEZ6Q53EL9 994 aa12.78□□□□□ -0.36
PDE6C-201ENST00000371447 PHLDB3Q6NSJ2 640 aa12.78□□□□□ -0.36
PDE6C-201ENST00000371447 TEPSINQ96N21 525 aa12.78□□□□□ -0.36
PDE6C-201ENST00000371447 SIX2Q9NPC8 291 aa12.78□□□□□ -0.36
PDE6C-201ENST00000371447 PLCB1Q9NQ66 1216 aa12.78□□□□□ -0.36
PDE6C-201ENST00000371447 AIPL1Q9NZN9 384 aa12.78□□□□□ -0.36
PDE6C-201ENST00000371447 SEPT9Q9UHD8 586 aaPredicted RBP12.78□□□□□ -0.36
PDE6C-201ENST00000371447 SETQ01105 290 aaPredicted RBP12.77□□□□□ -0.36
PDE6C-201ENST00000371447 MAPK7Q13164 816 aa12.77□□□□□ -0.36
PDE6C-201ENST00000371447 MCF2L2Q86YR7 1114 aa12.77□□□□□ -0.36
PDE6C-201ENST00000371447 TRPM4Q8TD43 1214 aa12.77□□□□□ -0.36
PDE6C-201ENST00000371447 IQCDQ96DY2 449 aa12.77□□□□□ -0.36
PDE6C-201ENST00000371447 FIZ1Q96SL8 496 aa12.77□□□□□ -0.36
PDE6C-201ENST00000371447 PDCD2LQ9BRP1 358 aa12.77□□□□□ -0.36
PDE6C-201ENST00000371447 TMEM51Q9NW97 253 aa12.77□□□□□ -0.36
PDE6C-201ENST00000371447 GGA3Q9NZ52 723 aa12.77□□□□□ -0.36
PDE6C-201ENST00000371447 WDR46O15213 610 aaKnown RBP12.77□□□□□ -0.37
PDE6C-201ENST00000371447 FAM153BP0C7A2 387 aa12.77□□□□□ -0.37
PDE6C-201ENST00000371447 ITGA4P13612 1032 aa12.77□□□□□ -0.37
PDE6C-201ENST00000371447 FSTL1Q12841 308 aa12.77□□□□□ -0.37
PDE6C-201ENST00000371447 FAM153CQ494X1 144 aa12.77□□□□□ -0.37
PDE6C-201ENST00000371447 AADACL2Q6P093 401 aa12.77□□□□□ -0.37
PDE6C-201ENST00000371447 ARHGAP27Q6ZUM4 889 aa12.77□□□□□ -0.37
PDE6C-201ENST00000371447 ARHGEF19Q8IW93 802 aa12.77□□□□□ -0.37
PDE6C-201ENST00000371447 PAGR1Q9BTK6 254 aa12.77□□□□□ -0.37
PDE6C-201ENST00000371447 SLC38A10Q9HBR0 1119 aa12.77□□□□□ -0.37
PDE6C-201ENST00000371447 TMOD4Q9NZQ9 345 aa12.77□□□□□ -0.37
PDE6C-201ENST00000371447 FAM153AQ9UHL3 310 aa12.77□□□□□ -0.37
PDE6C-201ENST00000371447 PPP1R9AQ9ULJ8 1098 aa12.77□□□□□ -0.37
PDE6C-201ENST00000371447 CEP350Q5VT06 3117 aa12.77□□□□□ -0.37
PDE6C-201ENST00000371447 SIPA1L1O43166 1804 aa12.77□□□□□ -0.37
PDE6C-201ENST00000371447 DENND3A2RUS2 1198 aa12.77□□□□□ -0.37
PDE6C-201ENST00000371447 VWA5AO00534 786 aa12.77□□□□□ -0.37
PDE6C-201ENST00000371447 DHX15O43143 795 aaKnown RBP12.77□□□□□ -0.37
PDE6C-201ENST00000371447 NR3C2P08235 984 aa12.77□□□□□ -0.37
PDE6C-201ENST00000371447 BFSP1Q12934 665 aa12.77□□□□□ -0.37
PDE6C-201ENST00000371447 RUFY1Q96T51 708 aa12.77□□□□□ -0.37
PDE6C-201ENST00000371447 FRMPD4Q14CM0 1322 aa12.76□□□□□ -0.37
PDE6C-201ENST00000371447 GOLGA6BA6NDN3 693 aa12.76□□□□□ -0.37
PDE6C-201ENST00000371447 ANKRD63C9JTQ0 380 aa12.76□□□□□ -0.37
PDE6C-201ENST00000371447 VAMP7P51809 220 aa12.76□□□□□ -0.37
PDE6C-201ENST00000371447 IRX3P78415 501 aaPredicted RBP12.76□□□□□ -0.37
PDE6C-201ENST00000371447 DHX38Q92620 1227 aaKnown RBP12.76□□□□□ -0.37
PDE6C-201ENST00000371447 BTBD6Q96KE9 485 aa12.76□□□□□ -0.37
PDE6C-201ENST00000371447 THAP2Q9H0W7 228 aa12.76□□□□□ -0.37
PDE6C-201ENST00000371447 DPH5Q9H2P9 285 aa12.76□□□□□ -0.37
PDE6C-201ENST00000371447 HSPBP1Q9NZL4 362 aa12.76□□□□□ -0.37
PDE6C-201ENST00000371447 F8VZ95 297 aa12.76□□□□□ -0.37
PDE6C-201ENST00000371447 KRT5P13647 590 aa12.76□□□□□ -0.37
PDE6C-201ENST00000371447 CNTN2Q02246 1040 aa12.76□□□□□ -0.37
PDE6C-201ENST00000371447 NLGN2Q8NFZ4 835 aa12.76□□□□□ -0.37
PDE6C-201ENST00000371447 LNX1Q8TBB1 728 aaPredicted RBP12.76□□□□□ -0.37
PDE6C-201ENST00000371447 POMGNT1Q8WZA1 660 aa12.76□□□□□ -0.37
PDE6C-201ENST00000371447 TMEM143Q96AN5 459 aa12.76□□□□□ -0.37
PDE6C-201ENST00000371447 ARHGEF26Q96DR7 871 aa12.76□□□□□ -0.37
PDE6C-201ENST00000371447 FAM212AQ96EL1 285 aa12.76□□□□□ -0.37
PDE6C-201ENST00000371447 RIT2Q99578 217 aa12.76□□□□□ -0.37
PDE6C-201ENST00000371447 EDEM3Q9BZQ6 932 aa12.76□□□□□ -0.37
PDE6C-201ENST00000371447 STIM2Q9P246 746 aa12.76□□□□□ -0.37
PDE6C-201ENST00000371447 BCCIPQ9P287 314 aaKnown RBP eCLIP12.76□□□□□ -0.37
PDE6C-201ENST00000371447 CTTNBP2NLQ9P2B4 639 aa12.76□□□□□ -0.37
PDE6C-201ENST00000371447 HPCAL4Q9UM19 191 aa12.76□□□□□ -0.37
PDE6C-201ENST00000371447 IGSF9BQ9UPX0 1349 aa12.76□□□□□ -0.37
PDE6C-201ENST00000371447 HNRNPDLO14979 420 aaKnown RBP12.75□□□□□ -0.37
PDE6C-201ENST00000371447 SOX5P35711 763 aa12.75□□□□□ -0.37
PDE6C-201ENST00000371447 HSD17B4P51659 736 aa12.75□□□□□ -0.37
PDE6C-201ENST00000371447 HNRNPH2P55795 449 aaKnown RBP12.75□□□□□ -0.37
PDE6C-201ENST00000371447 MARSP56192 900 aaKnown RBP12.75□□□□□ -0.37
PDE6C-201ENST00000371447 TSEN2Q8NCE0 465 aaKnown RBP12.75□□□□□ -0.37
PDE6C-201ENST00000371447 SLC30A5Q8TAD4 765 aa12.75□□□□□ -0.37
PDE6C-201ENST00000371447 SLC35G2Q8TBE7 412 aa12.75□□□□□ -0.37
PDE6C-201ENST00000371447 HNRNPLLQ8WVV9 542 aaKnown RBP12.75□□□□□ -0.37
PDE6C-201ENST00000371447 CTNNBL1Q8WYA6 563 aaPredicted RBP12.75□□□□□ -0.37
PDE6C-201ENST00000371447 CELF4Q9BZC1 486 aaKnown RBP12.75□□□□□ -0.37
PDE6C-201ENST00000371447 PXMP2Q9NR77 195 aa12.75□□□□□ -0.37
PDE6C-201ENST00000371447 ARFGEF1Q9Y6D6 1849 aa12.75□□□□□ -0.37
PDE6C-201ENST00000371447 KRIT1O00522 736 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms