RNA–Protein interactions for RNA: ENST00000369846.8

LCA5-201, Transcript of LCA5, lebercilin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LCA5, Length 4,542 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCA5-201ENST00000369846 GJB4Q9NTQ9 266 aa9.12□□□□□ -0.95
LCA5-201ENST00000369846 HAO1Q9UJM8 370 aa9.12□□□□□ -0.95
LCA5-201ENST00000369846 ITGB1BP2Q9UKP3 347 aa9.12□□□□□ -0.95
LCA5-201ENST00000369846 AKAP10O43572 662 aa9.12□□□□□ -0.95
LCA5-201ENST00000369846 ENO3P13929 434 aaPredicted RBP9.12□□□□□ -0.95
LCA5-201ENST00000369846 GJA8P48165 433 aa9.12□□□□□ -0.95
LCA5-201ENST00000369846 TFAP4Q01664 338 aa9.12□□□□□ -0.95
LCA5-201ENST00000369846 DNAL1Q4LDG9 190 aa9.12□□□□□ -0.95
LCA5-201ENST00000369846 NSMFQ6X4W1 530 aa9.12□□□□□ -0.95
LCA5-201ENST00000369846 NEK8Q86SG6 692 aa9.12□□□□□ -0.95
LCA5-201ENST00000369846 DHX40Q8IX18 779 aaKnown RBP9.12□□□□□ -0.95
LCA5-201ENST00000369846 CCNYL1Q8N7R7 359 aa9.12□□□□□ -0.95
LCA5-201ENST00000369846 CHP1Q99653 195 aa9.12□□□□□ -0.95
LCA5-201ENST00000369846 VPS11Q9H270 941 aa9.12□□□□□ -0.95
LCA5-201ENST00000369846 GOLPH3LQ9H4A5 285 aa9.12□□□□□ -0.95
LCA5-201ENST00000369846 RAD21L1Q9H4I0 556 aa9.12□□□□□ -0.95
LCA5-201ENST00000369846 SUN2Q9UH99 717 aa9.12□□□□□ -0.95
LCA5-201ENST00000369846 FAM135BQ49AJ0 1406 aa9.12□□□□□ -0.95
LCA5-201ENST00000369846 ZMYM6O95789 1325 aa9.12□□□□□ -0.95
LCA5-201ENST00000369846 PRR23D1E9PI22 279 aaPredicted RBP9.12□□□□□ -0.95
LCA5-201ENST00000369846 LPXNO60711 386 aa9.12□□□□□ -0.95
LCA5-201ENST00000369846 KRT38O76015 456 aa9.12□□□□□ -0.95
LCA5-201ENST00000369846 PRR23D2P0DMB1 279 aaPredicted RBP9.12□□□□□ -0.95
LCA5-201ENST00000369846 TCN1P20061 433 aaPredicted RBP9.12□□□□□ -0.95
LCA5-201ENST00000369846 ZAP70P43403 619 aa9.12□□□□□ -0.95
LCA5-201ENST00000369846 CACNB1Q02641 598 aaPredicted RBP9.12□□□□□ -0.95
LCA5-201ENST00000369846 GRIN1Q05586 938 aa9.12□□□□□ -0.95
LCA5-201ENST00000369846 DARS2Q6PI48 645 aaKnown RBP9.12□□□□□ -0.95
LCA5-201ENST00000369846 PATL1Q86TB9 770 aaKnown RBP9.12□□□□□ -0.95
LCA5-201ENST00000369846 XAGE2Q96GT9 111 aa9.12□□□□□ -0.95
LCA5-201ENST00000369846 DCLRE1BQ9H816 532 aa9.12□□□□□ -0.95
LCA5-201ENST00000369846 TRIM10Q9UDY6 481 aa9.12□□□□□ -0.95
LCA5-201ENST00000369846 COL4A3BPQ9Y5P4 624 aa9.12□□□□□ -0.95
LCA5-201ENST00000369846 ATP7AQ04656 1500 aa9.11□□□□□ -0.95
LCA5-201ENST00000369846 ARHGEF40Q8TER5 1519 aa9.11□□□□□ -0.95
LCA5-201ENST00000369846 POTEB3A0JP26 581 aa9.11□□□□□ -0.95
LCA5-201ENST00000369846 TMEM120BA0PK00 339 aa9.11□□□□□ -0.95
LCA5-201ENST00000369846 TAF5LO75529 589 aa9.11□□□□□ -0.95
LCA5-201ENST00000369846 OCM2P0CE71 109 aa9.11□□□□□ -0.95
LCA5-201ENST00000369846 OCMP0CE72 109 aaPredicted RBP9.11□□□□□ -0.95
LCA5-201ENST00000369846 IL10P22301 178 aa9.11□□□□□ -0.95
LCA5-201ENST00000369846 ATP2B4P23634 1241 aa9.11□□□□□ -0.95
LCA5-201ENST00000369846 AARSP49588 968 aaKnown RBP eCLIP9.11□□□□□ -0.95
LCA5-201ENST00000369846 LONRF1Q17RB8 773 aa9.11□□□□□ -0.95
LCA5-201ENST00000369846 POTEBQ6S5H4 581 aa9.11□□□□□ -0.95
LCA5-201ENST00000369846 RAB44Q7Z6P3 723 aaPredicted RBP9.11□□□□□ -0.95
LCA5-201ENST00000369846 C4orf33Q8N1A6 199 aa9.11□□□□□ -0.95
LCA5-201ENST00000369846 RYBPQ8N488 228 aaPredicted RBP9.11□□□□□ -0.95
LCA5-201ENST00000369846 DEPDC1BQ8WUY9 529 aa9.11□□□□□ -0.95
LCA5-201ENST00000369846 LIMA1Q9UHB6 759 aaKnown RBP9.11□□□□□ -0.95
LCA5-201ENST00000369846 SAP30BPQ9UHR5 308 aaKnown RBP9.11□□□□□ -0.95
LCA5-201ENST00000369846 GINS2Q9Y248 185 aa9.11□□□□□ -0.95
LCA5-201ENST00000369846 CAMSAP1Q5T5Y3 1602 aa9.11□□□□□ -0.95
LCA5-201ENST00000369846 PLEKHG2Q9H7P9 1386 aa9.11□□□□□ -0.95
LCA5-201ENST00000369846 LRRC53A6NM62 1247 aa9.11□□□□□ -0.95
LCA5-201ENST00000369846 LCA5LO95447 670 aa9.11□□□□□ -0.95
LCA5-201ENST00000369846 FGAP02671 866 aa9.11□□□□□ -0.95
LCA5-201ENST00000369846 PLCG2P16885 1265 aa9.11□□□□□ -0.95
LCA5-201ENST00000369846 IL13P35225 146 aa9.11□□□□□ -0.95
LCA5-201ENST00000369846 TRAPPC10P48553 1259 aa9.11□□□□□ -0.95
LCA5-201ENST00000369846 EIF4A2Q14240 407 aaKnown RBP9.11□□□□□ -0.95
LCA5-201ENST00000369846 PREPLQ4J6C6 727 aaPredicted RBP9.11□□□□□ -0.95
LCA5-201ENST00000369846 FAM47AQ5JRC9 791 aa9.11□□□□□ -0.95
LCA5-201ENST00000369846 TTC33Q6PID6 262 aaPredicted RBP9.11□□□□□ -0.95
LCA5-201ENST00000369846 ZNF786Q8N393 782 aa9.11□□□□□ -0.95
LCA5-201ENST00000369846 GPKOWQ92917 476 aaPredicted RBP eCLIP9.11□□□□□ -0.95
LCA5-201ENST00000369846 MOV10L1Q9BXT6 1211 aaKnown RBP9.11□□□□□ -0.95
LCA5-201ENST00000369846 RANBP17Q9H2T7 1088 aaKnown RBP9.11□□□□□ -0.95
LCA5-201ENST00000369846 TRABDQ9H4I3 376 aa9.11□□□□□ -0.95
LCA5-201ENST00000369846 DTNAQ9Y4J8 743 aa9.11□□□□□ -0.95
LCA5-201ENST00000369846 KIF24Q5T7B8 1368 aa9.11□□□□□ -0.95
LCA5-201ENST00000369846 CD163L1Q9NR16 1453 aa9.11□□□□□ -0.95
LCA5-201ENST00000369846 NRXN1Q9ULB1 1477 aa9.11□□□□□ -0.95
LCA5-201ENST00000369846 TRIM49BA6NDI0 452 aa9.11□□□□□ -0.95
LCA5-201ENST00000369846 CLIC2O15247 247 aa9.11□□□□□ -0.95
LCA5-201ENST00000369846 ATP6V1G1O75348 118 aa9.11□□□□□ -0.95
LCA5-201ENST00000369846 UBOX5O94941 541 aa9.11□□□□□ -0.95
LCA5-201ENST00000369846 POLR2BP30876 1174 aaKnown RBP9.11□□□□□ -0.95
LCA5-201ENST00000369846 EFTUD2Q15029 972 aaKnown RBP eCLIP9.11□□□□□ -0.95
LCA5-201ENST00000369846 MAPK11Q15759 364 aa9.11□□□□□ -0.95
LCA5-201ENST00000369846 IZUMO2Q6UXV1 221 aa9.11□□□□□ -0.95
LCA5-201ENST00000369846 GPR141Q7Z602 305 aa9.11□□□□□ -0.95
LCA5-201ENST00000369846 CDC26Q8NHZ8 85 aa9.11□□□□□ -0.95
LCA5-201ENST00000369846 CAPSLQ8WWF8 208 aa9.11□□□□□ -0.95
LCA5-201ENST00000369846 PAGE5Q96GU1 130 aa9.11□□□□□ -0.95
LCA5-201ENST00000369846 BHMT2Q9H2M3 363 aa9.11□□□□□ -0.95
LCA5-201ENST00000369846 GTSE1Q9NYZ3 720 aa9.11□□□□□ -0.95
LCA5-201ENST00000369846 DAPK2Q9UIK4 370 aa9.11□□□□□ -0.95
LCA5-201ENST00000369846 MID2Q9UJV3 735 aa9.11□□□□□ -0.95
LCA5-201ENST00000369846 NOC2LQ9Y3T9 749 aaKnown RBP9.11□□□□□ -0.95
LCA5-201ENST00000369846 CDHR2Q9BYE9 1310 aa9.1□□□□□ -0.95
LCA5-201ENST00000369846 FANCAO15360 1455 aa9.1□□□□□ -0.95
LCA5-201ENST00000369846 MYO3AQ8NEV4 1616 aa9.1□□□□□ -0.95
LCA5-201ENST00000369846 C1orf232A0A0U1RR37 186 aa9.1□□□□□ -0.95
LCA5-201ENST00000369846 A0A1B0GW55 424 aa9.1□□□□□ -0.95
LCA5-201ENST00000369846 C16orf96A6NNT2 1141 aa9.1□□□□□ -0.95
LCA5-201ENST00000369846 SPDYE16A6NNV3 312 aaPredicted RBP9.1□□□□□ -0.95
LCA5-201ENST00000369846 LGALS16A8MUM7 142 aa9.1□□□□□ -0.95
LCA5-201ENST00000369846 PJA2O43164 708 aa9.1□□□□□ -0.95
LCA5-201ENST00000369846 DUX4L2P0CJ85 424 aa9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms