RNA–Protein interactions for RNA: ENST00000369550.9

DKC1-201, Transcript of dyskerin pseudouridine synthase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene DKC1, Length 2,577 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DKC1-201ENST00000369550 NT5C3AQ9H0P0 336 aa18.24■□□□□ 0.51
DKC1-201ENST00000369550 RXFP1Q9HBX9 757 aa18.24■□□□□ 0.51
DKC1-201ENST00000369550 SEPT11Q9NVA2 429 aaKnown RBP18.24■□□□□ 0.51
DKC1-201ENST00000369550 ZFATQ9P243 1243 aa18.24■□□□□ 0.51
DKC1-201ENST00000369550 PARP2Q9UGN5 583 aa18.24■□□□□ 0.51
DKC1-201ENST00000369550 NENFQ9UMX5 172 aa18.24■□□□□ 0.51
DKC1-201ENST00000369550 RTCBQ9Y3I0 505 aaKnown RBP18.24■□□□□ 0.51
DKC1-201ENST00000369550 COL5A3P25940 1745 aaPredicted RBP18.24■□□□□ 0.51
DKC1-201ENST00000369550 ZNF831Q5JPB2 1677 aa18.24■□□□□ 0.51
DKC1-201ENST00000369550 STAT1P42224 750 aa18.24■□□□□ 0.51
DKC1-201ENST00000369550 ABL2P42684 1182 aa18.24■□□□□ 0.51
DKC1-201ENST00000369550 DDX25Q9UHL0 483 aaKnown RBP18.24■□□□□ 0.51
DKC1-201ENST00000369550 PCDHA12Q9UN75 941 aa18.24■□□□□ 0.51
DKC1-201ENST00000369550 LAMB1P07942 1786 aa18.24■□□□□ 0.51
DKC1-201ENST00000369550 O00370 1275 aa18.23■□□□□ 0.51
DKC1-201ENST00000369550 FERP16591 822 aa18.23■□□□□ 0.51
DKC1-201ENST00000369550 PLS1Q14651 629 aa18.23■□□□□ 0.51
DKC1-201ENST00000369550 LONRF1Q17RB8 773 aa18.23■□□□□ 0.51
DKC1-201ENST00000369550 GDAP1Q8TB36 358 aa18.23■□□□□ 0.51
DKC1-201ENST00000369550 ARHGEF2Q92974 986 aaKnown RBP18.23■□□□□ 0.51
DKC1-201ENST00000369550 TAOK3Q9H2K8 898 aa18.23■□□□□ 0.51
DKC1-201ENST00000369550 ETNK1Q9HBU6 452 aa18.23■□□□□ 0.51
DKC1-201ENST00000369550 LAMB2P55268 1798 aa18.23■□□□□ 0.51
DKC1-201ENST00000369550 MPHOSPH10O00566 681 aaKnown RBP18.23■□□□□ 0.51
DKC1-201ENST00000369550 KCNQ2O43526 872 aa18.23■□□□□ 0.51
DKC1-201ENST00000369550 UPP2O95045 317 aa18.23■□□□□ 0.51
DKC1-201ENST00000369550 GBP1P32455 592 aa18.23■□□□□ 0.51
DKC1-201ENST00000369550 CLUL1Q15846 466 aa18.23■□□□□ 0.51
DKC1-201ENST00000369550 AADACL2Q6P093 401 aa18.23■□□□□ 0.51
DKC1-201ENST00000369550 LNX1Q8TBB1 728 aaPredicted RBP18.23■□□□□ 0.51
DKC1-201ENST00000369550 BSDC1Q9NW68 430 aaPredicted RBP18.23■□□□□ 0.51
DKC1-201ENST00000369550 KLHL14Q9P2G3 628 aa18.23■□□□□ 0.51
DKC1-201ENST00000369550 SAP30BPQ9UHR5 308 aaKnown RBP18.23■□□□□ 0.51
DKC1-201ENST00000369550 ATP8B3O60423 1300 aa18.22■□□□□ 0.51
DKC1-201ENST00000369550 ESYT2A0FGR8 921 aa18.22■□□□□ 0.51
DKC1-201ENST00000369550 PHF2O75151 1096 aa18.22■□□□□ 0.51
DKC1-201ENST00000369550 LINGO3P0C6S8 592 aa18.22■□□□□ 0.51
DKC1-201ENST00000369550 HIBADHP31937 336 aaKnown RBP18.22■□□□□ 0.51
DKC1-201ENST00000369550 NT5C2P49902 561 aa18.22■□□□□ 0.51
DKC1-201ENST00000369550 CASP5P51878 434 aa18.22■□□□□ 0.51
DKC1-201ENST00000369550 JAM2P57087 298 aa18.22■□□□□ 0.51
DKC1-201ENST00000369550 EPHA7Q15375 998 aa18.22■□□□□ 0.51
DKC1-201ENST00000369550 ASRGL1Q7L266 308 aa18.22■□□□□ 0.51
DKC1-201ENST00000369550 FBXO33Q7Z6M2 555 aa18.22■□□□□ 0.51
DKC1-201ENST00000369550 FBF1Q8TES7 1133 aa18.22■□□□□ 0.51
DKC1-201ENST00000369550 ALG3Q92685 438 aa18.22■□□□□ 0.51
DKC1-201ENST00000369550 TMEM109Q9BVC6 243 aa18.22■□□□□ 0.51
DKC1-201ENST00000369550 CPSF2Q9P2I0 782 aaKnown RBP18.22■□□□□ 0.51
DKC1-201ENST00000369550 IGSF9BQ9UPX0 1349 aa18.22■□□□□ 0.51
DKC1-201ENST00000369550 KDM3AQ9Y4C1 1321 aa18.22■□□□□ 0.51
DKC1-201ENST00000369550 KLHL33A6NCF5 533 aa18.22■□□□□ 0.51
DKC1-201ENST00000369550 PODXLO00592 558 aa18.22■□□□□ 0.51
DKC1-201ENST00000369550 AP1G2O75843 785 aa18.22■□□□□ 0.51
DKC1-201ENST00000369550 TMEM253P0C7T8 217 aa18.22■□□□□ 0.51
DKC1-201ENST00000369550 LMNB1P20700 586 aa18.22■□□□□ 0.51
DKC1-201ENST00000369550 CHRNA3P32297 505 aa18.22■□□□□ 0.51
DKC1-201ENST00000369550 CTCFP49711 727 aaPredicted RBP18.22■□□□□ 0.51
DKC1-201ENST00000369550 ZC3H3Q8IXZ2 948 aaKnown RBP18.22■□□□□ 0.51
DKC1-201ENST00000369550 SH3RF3Q8TEJ3 882 aaPredicted RBP18.22■□□□□ 0.51
DKC1-201ENST00000369550 RMDN2Q96LZ7 410 aa18.22■□□□□ 0.51
DKC1-201ENST00000369550 RAB3IPQ96QF0 476 aaPredicted RBP18.22■□□□□ 0.51
DKC1-201ENST00000369550 PTPN22Q9Y2R2 807 aa18.22■□□□□ 0.51
DKC1-201ENST00000369550 POTEB3A0JP26 581 aa18.21■□□□□ 0.51
DKC1-201ENST00000369550 POTECB2RU33 542 aa18.21■□□□□ 0.51
DKC1-201ENST00000369550 GJB6O95452 261 aa18.21■□□□□ 0.51
DKC1-201ENST00000369550 NEFHP12036 1026 aa18.21■□□□□ 0.51
DKC1-201ENST00000369550 RARGP13631 454 aa18.21■□□□□ 0.51
DKC1-201ENST00000369550 ATP4AP20648 1035 aa18.21■□□□□ 0.51
DKC1-201ENST00000369550 RASA1P20936 1047 aa18.21■□□□□ 0.51
DKC1-201ENST00000369550 SPTY2D1Q68D10 685 aaPredicted RBP18.21■□□□□ 0.51
DKC1-201ENST00000369550 POTEBQ6S5H4 581 aa18.21■□□□□ 0.51
DKC1-201ENST00000369550 TGFBRAP1Q8WUH2 860 aa18.21■□□□□ 0.51
DKC1-201ENST00000369550 RUNDC3BQ96NL0 473 aa18.21■□□□□ 0.51
DKC1-201ENST00000369550 ZNF652Q9Y2D9 606 aa18.21■□□□□ 0.51
DKC1-201ENST00000369550 KIAA1551Q9HCM1 1747 aa18.21■□□□□ 0.51
DKC1-201ENST00000369550 AKAP3O75969 853 aa18.21■□□□□ 0.51
DKC1-201ENST00000369550 SNUPNO95149 360 aaKnown RBP18.21■□□□□ 0.51
DKC1-201ENST00000369550 ACSL3O95573 720 aa18.21■□□□□ 0.51
DKC1-201ENST00000369550 CYP11B2P19099 503 aa18.21■□□□□ 0.51
DKC1-201ENST00000369550 PCK1P35558 622 aa18.21■□□□□ 0.51
DKC1-201ENST00000369550 FAM98CQ17RN3 349 aaKnown RBP18.21■□□□□ 0.51
DKC1-201ENST00000369550 MFSD5Q6N075 450 aa18.21■□□□□ 0.51
DKC1-201ENST00000369550 CCDC137Q6PK04 289 aaKnown RBP18.21■□□□□ 0.51
DKC1-201ENST00000369550 TEX9Q8N6V9 391 aa18.21■□□□□ 0.51
DKC1-201ENST00000369550 HAS1Q92839 578 aa18.21■□□□□ 0.51
DKC1-201ENST00000369550 EYA3Q99504 573 aa18.21■□□□□ 0.51
DKC1-201ENST00000369550 ETAA1Q9NY74 926 aa18.21■□□□□ 0.51
DKC1-201ENST00000369550 FRMPD2Q68DX3 1309 aaPredicted RBP18.21■□□□□ 0.5
DKC1-201ENST00000369550 A6NHS1 94 aa18.2■□□□□ 0.5
DKC1-201ENST00000369550 EDIL3O43854 480 aa18.2■□□□□ 0.5
DKC1-201ENST00000369550 CREB1P16220 341 aa18.2■□□□□ 0.5
DKC1-201ENST00000369550 VCAM1P19320 739 aa18.2■□□□□ 0.5
DKC1-201ENST00000369550 CCNG1P51959 295 aa18.2■□□□□ 0.5
DKC1-201ENST00000369550 RWDD2BP57060 319 aa18.2■□□□□ 0.5
DKC1-201ENST00000369550 PPATQ06203 517 aa18.2■□□□□ 0.5
DKC1-201ENST00000369550 UBE2SQ16763 222 aa18.2■□□□□ 0.5
DKC1-201ENST00000369550 KNOP1Q1ED39 458 aaKnown RBP18.2■□□□□ 0.5
DKC1-201ENST00000369550 GNPTABQ3T906 1256 aa18.2■□□□□ 0.5
DKC1-201ENST00000369550 CCDC105Q8IYK2 499 aa18.2■□□□□ 0.5
DKC1-201ENST00000369550 TGS1Q96RS0 853 aaKnown RBP18.2■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms