RNA–Protein interactions for RNA: ENST00000369530.5

CSDE1-204, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 3,774 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-204ENST00000369530 PARD6BQ9BYG5 372 aa7.58□□□□□ -1.2
CSDE1-204ENST00000369530 KDM4CQ9H3R0 1056 aa7.58□□□□□ -1.2
CSDE1-204ENST00000369530 BLOC1S6Q9UL45 172 aa7.58□□□□□ -1.2
CSDE1-204ENST00000369530 ODF2LQ9ULJ1 636 aa7.58□□□□□ -1.2
CSDE1-204ENST00000369530 FRYLO94915 3013 aa7.58□□□□□ -1.2
CSDE1-204ENST00000369530 EME2A4GXA9 379 aaPredicted RBP7.58□□□□□ -1.2
CSDE1-204ENST00000369530 IQCF3P0C7M6 154 aa7.58□□□□□ -1.2
CSDE1-204ENST00000369530 PDCP20941 246 aa7.58□□□□□ -1.2
CSDE1-204ENST00000369530 ABCD1P33897 745 aa7.58□□□□□ -1.2
CSDE1-204ENST00000369530 TUBB2AQ13885 445 aa7.58□□□□□ -1.2
CSDE1-204ENST00000369530 ZNF598Q86UK7 904 aaKnown RBP7.58□□□□□ -1.2
CSDE1-204ENST00000369530 IGSF22Q8N9C0 903 aa7.58□□□□□ -1.2
CSDE1-204ENST00000369530 TUBB2BQ9BVA1 445 aa7.58□□□□□ -1.2
CSDE1-204ENST00000369530 KAT14Q9H8E8 782 aa7.58□□□□□ -1.2
CSDE1-204ENST00000369530 NUB1Q9Y5A7 615 aa7.58□□□□□ -1.2
CSDE1-204ENST00000369530 FAM169AQ9Y6X4 670 aa7.58□□□□□ -1.2
CSDE1-204ENST00000369530 A6NNZ2 444 aa7.57□□□□□ -1.2
CSDE1-204ENST00000369530 ZSCAN9O15535 394 aaPredicted RBP7.57□□□□□ -1.2
CSDE1-204ENST00000369530 TUBB8Q3ZCM7 444 aa7.57□□□□□ -1.2
CSDE1-204ENST00000369530 XKR4Q5GH76 650 aa7.57□□□□□ -1.2
CSDE1-204ENST00000369530 TMEM67Q5HYA8 995 aa7.57□□□□□ -1.2
CSDE1-204ENST00000369530 GALNT17Q6IS24 598 aa7.57□□□□□ -1.2
CSDE1-204ENST00000369530 MFN1Q8IWA4 741 aa7.57□□□□□ -1.2
CSDE1-204ENST00000369530 CEP112Q8N8E3 955 aa7.57□□□□□ -1.2
CSDE1-204ENST00000369530 PLEKHG4BQ96PX9 1271 aa7.57□□□□□ -1.2
CSDE1-204ENST00000369530 JPH2Q9BR39 696 aaPredicted RBP7.57□□□□□ -1.2
CSDE1-204ENST00000369530 GPCPD1Q9NPB8 672 aa7.57□□□□□ -1.2
CSDE1-204ENST00000369530 EML5Q05BV3 1969 aa7.57□□□□□ -1.2
CSDE1-204ENST00000369530 PES1O00541 588 aaKnown RBP7.57□□□□□ -1.2
CSDE1-204ENST00000369530 SLC37A4O43826 429 aa7.57□□□□□ -1.2
CSDE1-204ENST00000369530 CDKL5O76039 1030 aa7.57□□□□□ -1.2
CSDE1-204ENST00000369530 EDN1P05305 212 aa7.57□□□□□ -1.2
CSDE1-204ENST00000369530 TNFAIP2Q03169 654 aa7.57□□□□□ -1.2
CSDE1-204ENST00000369530 UGCGQ16739 394 aa7.57□□□□□ -1.2
CSDE1-204ENST00000369530 PPP4R3CPQ6ZMV5 832 aa7.57□□□□□ -1.2
CSDE1-204ENST00000369530 RUFY4Q6ZNE9 571 aa7.57□□□□□ -1.2
CSDE1-204ENST00000369530 APLFQ8IW19 511 aaPredicted RBP7.57□□□□□ -1.2
CSDE1-204ENST00000369530 CCDC82Q8N4S0 544 aa7.57□□□□□ -1.2
CSDE1-204ENST00000369530 CNNM3Q8NE01 707 aa7.57□□□□□ -1.2
CSDE1-204ENST00000369530 BPIFA3Q9BQP9 254 aa7.57□□□□□ -1.2
CSDE1-204ENST00000369530 RNPEPQ9H4A4 650 aa7.57□□□□□ -1.2
CSDE1-204ENST00000369530 NCOA5Q9HCD5 579 aaKnown RBP7.57□□□□□ -1.2
CSDE1-204ENST00000369530 TMEM260Q9NX78 707 aa7.57□□□□□ -1.2
CSDE1-204ENST00000369530 MROH7Q68CQ1 1323 aa7.57□□□□□ -1.2
CSDE1-204ENST00000369530 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP7.57□□□□□ -1.2
CSDE1-204ENST00000369530 TBX3O15119 743 aa7.57□□□□□ -1.2
CSDE1-204ENST00000369530 MSH4O15457 936 aa7.57□□□□□ -1.2
CSDE1-204ENST00000369530 JAK2O60674 1132 aa7.57□□□□□ -1.2
CSDE1-204ENST00000369530 PGK1P00558 417 aa7.57□□□□□ -1.2
CSDE1-204ENST00000369530 MMP1P03956 469 aa7.57□□□□□ -1.2
CSDE1-204ENST00000369530 CLTBP09497 229 aa7.57□□□□□ -1.2
CSDE1-204ENST00000369530 DNM1Q05193 864 aaKnown RBP7.57□□□□□ -1.2
CSDE1-204ENST00000369530 EHHADHQ08426 723 aa7.57□□□□□ -1.2
CSDE1-204ENST00000369530 PTPAQ15257 358 aa7.57□□□□□ -1.2
CSDE1-204ENST00000369530 EMC10Q5UCC4 262 aa7.57□□□□□ -1.2
CSDE1-204ENST00000369530 CMTR1Q8N1G2 835 aaKnown RBP7.57□□□□□ -1.2
CSDE1-204ENST00000369530 SCFD2Q8WU76 684 aa7.57□□□□□ -1.2
CSDE1-204ENST00000369530 TRIM5Q9C035 493 aa7.57□□□□□ -1.2
CSDE1-204ENST00000369530 VPS18Q9P253 973 aa7.57□□□□□ -1.2
CSDE1-204ENST00000369530 PCDHA4Q9UN74 947 aa7.57□□□□□ -1.2
CSDE1-204ENST00000369530 MTMR7Q9Y216 660 aa7.57□□□□□ -1.2
CSDE1-204ENST00000369530 PCDHA1Q9Y5I3 950 aa7.57□□□□□ -1.2
CSDE1-204ENST00000369530 COL27A1Q8IZC6 1860 aaPredicted RBP7.56□□□□□ -1.2
CSDE1-204ENST00000369530 RXRAP19793 462 aa7.56□□□□□ -1.2
CSDE1-204ENST00000369530 ANO6Q4KMQ2 910 aa7.56□□□□□ -1.2
CSDE1-204ENST00000369530 FBXW10Q5XX13 1052 aa7.56□□□□□ -1.2
CSDE1-204ENST00000369530 USP17L6PQ6QN14 398 aa7.56□□□□□ -1.2
CSDE1-204ENST00000369530 CD300LGQ6UXG3 332 aa7.56□□□□□ -1.2
CSDE1-204ENST00000369530 OXER1Q8TDS5 423 aa7.56□□□□□ -1.2
CSDE1-204ENST00000369530 AIFM3Q96NN9 605 aa7.56□□□□□ -1.2
CSDE1-204ENST00000369530 NUP62CLQ9H1M0 184 aa7.56□□□□□ -1.2
CSDE1-204ENST00000369530 IRAK4Q9NWZ3 460 aa7.56□□□□□ -1.2
CSDE1-204ENST00000369530 YBX2Q9Y2T7 364 aaKnown RBP7.56□□□□□ -1.2
CSDE1-204ENST00000369530 CKBP12277 381 aa7.56□□□□□ -1.2
CSDE1-204ENST00000369530 ATF7P17544 494 aaPredicted RBP7.56□□□□□ -1.2
CSDE1-204ENST00000369530 SLMAPQ14BN4 828 aa7.56□□□□□ -1.2
CSDE1-204ENST00000369530 SDR16C5Q8N3Y7 309 aa7.56□□□□□ -1.2
CSDE1-204ENST00000369530 CXorf38Q8TB03 319 aa7.56□□□□□ -1.2
CSDE1-204ENST00000369530 THOC1Q96FV9 657 aaKnown RBP7.56□□□□□ -1.2
CSDE1-204ENST00000369530 KCNH7Q9NS40 1196 aa7.56□□□□□ -1.2
CSDE1-204ENST00000369530 SLC5A4Q9NY91 659 aa7.56□□□□□ -1.2
CSDE1-204ENST00000369530 CPSF2Q9P2I0 782 aaKnown RBP7.56□□□□□ -1.2
CSDE1-204ENST00000369530 STX8Q9UNK0 236 aa7.56□□□□□ -1.2
CSDE1-204ENST00000369530 FAN1Q9Y2M0 1017 aa7.56□□□□□ -1.2
CSDE1-204ENST00000369530 LGALS2P05162 132 aa7.56□□□□□ -1.2
CSDE1-204ENST00000369530 POU5F1BQ06416 359 aa7.56□□□□□ -1.2
CSDE1-204ENST00000369530 SF3A1Q15459 793 aaKnown RBP7.56□□□□□ -1.2
CSDE1-204ENST00000369530 CCDC174Q6PII3 467 aa7.56□□□□□ -1.2
CSDE1-204ENST00000369530 SYNE3Q6ZMZ3 975 aa7.56□□□□□ -1.2
CSDE1-204ENST00000369530 KIAA1328Q86T90 577 aa7.56□□□□□ -1.2
CSDE1-204ENST00000369530 TDHQ8IZJ6 230 aa7.56□□□□□ -1.2
CSDE1-204ENST00000369530 PDE11AQ9HCR9 933 aa7.56□□□□□ -1.2
CSDE1-204ENST00000369530 SUN2Q9UH99 717 aa7.56□□□□□ -1.2
CSDE1-204ENST00000369530 ZNF232Q9UNY5 417 aa7.56□□□□□ -1.2
CSDE1-204ENST00000369530 PCDHA2Q9Y5H9 948 aa7.56□□□□□ -1.2
CSDE1-204ENST00000369530 KLF18A0A0U1RQI7 1052 aa7.55□□□□□ -1.2
CSDE1-204ENST00000369530 GOLGA8BA8MQT2 603 aa7.55□□□□□ -1.2
CSDE1-204ENST00000369530 IFIT3O14879 490 aaKnown RBP7.55□□□□□ -1.2
CSDE1-204ENST00000369530 LILRB3O75022 631 aa7.55□□□□□ -1.2
CSDE1-204ENST00000369530 PROZP22891 400 aa7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 90.3 ms