RNA–Protein interactions for RNA: ENST00000368686.1

CHTOP-201, Transcript of chromatin target of PRMT1, humanhuman

TSL 2 BASIC

Gene CHTOP, Length 2,250 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOP-201ENST00000368686 SUPT20HQ8NEM7 779 aa19.32■□□□□ 0.68
CHTOP-201ENST00000368686 LRRC8CQ8TDW0 803 aa19.32■□□□□ 0.68
CHTOP-201ENST00000368686 GPKOWQ92917 476 aaPredicted RBP eCLIP19.32■□□□□ 0.68
CHTOP-201ENST00000368686 GBP5Q96PP8 586 aa19.32■□□□□ 0.68
CHTOP-201ENST00000368686 NDNQ99608 321 aa19.32■□□□□ 0.68
CHTOP-201ENST00000368686 SLC4A7Q9Y6M7 1214 aa19.32■□□□□ 0.68
CHTOP-201ENST00000368686 PODXLO00592 558 aa19.32■□□□□ 0.68
CHTOP-201ENST00000368686 FGRP09769 529 aa19.32■□□□□ 0.68
CHTOP-201ENST00000368686 SLC5A1P13866 664 aa19.32■□□□□ 0.68
CHTOP-201ENST00000368686 KCNA3P22001 575 aa19.32■□□□□ 0.68
CHTOP-201ENST00000368686 EPS15P42566 896 aa19.32■□□□□ 0.68
CHTOP-201ENST00000368686 RNASELQ05823 741 aaKnown RBP19.32■□□□□ 0.68
CHTOP-201ENST00000368686 ESCO1Q5FWF5 840 aa19.32■□□□□ 0.68
CHTOP-201ENST00000368686 MYOCDQ8IZQ8 938 aa19.32■□□□□ 0.68
CHTOP-201ENST00000368686 ANKRD42Q8N9B4 389 aa19.32■□□□□ 0.68
CHTOP-201ENST00000368686 AZIN2Q96A70 460 aa19.32■□□□□ 0.68
CHTOP-201ENST00000368686 MMTAG2Q9BU76 263 aaKnown RBP19.32■□□□□ 0.68
CHTOP-201ENST00000368686 POTEFA5A3E0 1075 aa19.31■□□□□ 0.68
CHTOP-201ENST00000368686 CYP27B1O15528 508 aa19.31■□□□□ 0.68
CHTOP-201ENST00000368686 POTEIP0CG38 1075 aa19.31■□□□□ 0.68
CHTOP-201ENST00000368686 POTEJP0CG39 1038 aa19.31■□□□□ 0.68
CHTOP-201ENST00000368686 RASA1P20936 1047 aa19.31■□□□□ 0.68
CHTOP-201ENST00000368686 GSTT1P30711 240 aa19.31■□□□□ 0.68
CHTOP-201ENST00000368686 STX2P32856 288 aa19.31■□□□□ 0.68
CHTOP-201ENST00000368686 PRKCIP41743 596 aa19.31■□□□□ 0.68
CHTOP-201ENST00000368686 YARSP54577 528 aaKnown RBP19.31■□□□□ 0.68
CHTOP-201ENST00000368686 POTEEQ6S8J3 1075 aa19.31■□□□□ 0.68
CHTOP-201ENST00000368686 LCA5Q86VQ0 697 aa19.31■□□□□ 0.68
CHTOP-201ENST00000368686 ERP27Q96DN0 273 aa19.31■□□□□ 0.68
CHTOP-201ENST00000368686 TBC1D10AQ9BXI6 508 aa19.31■□□□□ 0.68
CHTOP-201ENST00000368686 NLRP2Q9NX02 1062 aa19.31■□□□□ 0.68
CHTOP-201ENST00000368686 ANKRD36CQ5JPF3 1778 aa19.31■□□□□ 0.68
CHTOP-201ENST00000368686 SMAPO00193 183 aa19.31■□□□□ 0.68
CHTOP-201ENST00000368686 DDX3YO15523 660 aaKnown RBP19.31■□□□□ 0.68
CHTOP-201ENST00000368686 PRPF4BQ13523 1007 aaKnown RBP19.31■□□□□ 0.68
CHTOP-201ENST00000368686 UBAP2Q5T6F2 1119 aaKnown RBP19.31■□□□□ 0.68
CHTOP-201ENST00000368686 DPY19L2Q6NUT2 758 aa19.31■□□□□ 0.68
CHTOP-201ENST00000368686 BICDL1Q6ZP65 573 aa19.31■□□□□ 0.68
CHTOP-201ENST00000368686 ARHGEF18Q6ZSZ5 1173 aa19.31■□□□□ 0.68
CHTOP-201ENST00000368686 TOM1L2Q6ZVM7 507 aa19.31■□□□□ 0.68
CHTOP-201ENST00000368686 DYMQ7RTS9 669 aa19.31■□□□□ 0.68
CHTOP-201ENST00000368686 GDAP1Q8TB36 358 aa19.31■□□□□ 0.68
CHTOP-201ENST00000368686 TAOK3Q9H2K8 898 aa19.31■□□□□ 0.68
CHTOP-201ENST00000368686 ERVK-5Q9HDB9 667 aa19.31■□□□□ 0.68
CHTOP-201ENST00000368686 KCNK9Q9NPC2 374 aa19.31■□□□□ 0.68
CHTOP-201ENST00000368686 TMCO1Q9UM00 188 aa19.31■□□□□ 0.68
CHTOP-201ENST00000368686 ATP9AO75110 1047 aa19.3■□□□□ 0.68
CHTOP-201ENST00000368686 TJP3O95049 919 aa19.3■□□□□ 0.68
CHTOP-201ENST00000368686 TARSP26639 723 aaKnown RBP19.3■□□□□ 0.68
CHTOP-201ENST00000368686 RPL21P46778 160 aaKnown RBP19.3■□□□□ 0.68
CHTOP-201ENST00000368686 CTSWP56202 376 aa19.3■□□□□ 0.68
CHTOP-201ENST00000368686 TRMT10CQ7L0Y3 403 aaKnown RBP19.3■□□□□ 0.68
CHTOP-201ENST00000368686 OTUD6AQ7L8S5 288 aa19.3■□□□□ 0.68
CHTOP-201ENST00000368686 ZNF513Q8N8E2 541 aaPredicted RBP19.3■□□□□ 0.68
CHTOP-201ENST00000368686 TTC8Q8TAM2 541 aa19.3■□□□□ 0.68
CHTOP-201ENST00000368686 LARP4BQ92615 738 aaKnown RBP19.3■□□□□ 0.68
CHTOP-201ENST00000368686 LRRC37BQ96QE4 947 aa19.3■□□□□ 0.68
CHTOP-201ENST00000368686 PPP1R12CQ9BZL4 782 aa19.3■□□□□ 0.68
CHTOP-201ENST00000368686 LRRC27Q9C0I9 530 aa19.3■□□□□ 0.68
CHTOP-201ENST00000368686 BLOC1S4Q9NUP1 217 aa19.3■□□□□ 0.68
CHTOP-201ENST00000368686 HAO1Q9UJM8 370 aa19.3■□□□□ 0.68
CHTOP-201ENST00000368686 UBR2Q8IWV8 1755 aa19.3■□□□□ 0.68
CHTOP-201ENST00000368686 SMIM22K7EJ46 135 aa19.3■□□□□ 0.68
CHTOP-201ENST00000368686 TRAFD1O14545 582 aaPredicted RBP19.3■□□□□ 0.68
CHTOP-201ENST00000368686 PHF2O75151 1096 aa19.3■□□□□ 0.68
CHTOP-201ENST00000368686 HSPA6P17066 643 aa19.3■□□□□ 0.68
CHTOP-201ENST00000368686 CHRNA3P32297 505 aa19.3■□□□□ 0.68
CHTOP-201ENST00000368686 PTGIRP43119 386 aa19.3■□□□□ 0.68
CHTOP-201ENST00000368686 SH3BGRP55822 239 aaPredicted RBP19.3■□□□□ 0.68
CHTOP-201ENST00000368686 MYBPC3Q14896 1274 aa19.3■□□□□ 0.68
CHTOP-201ENST00000368686 CCDC6Q16204 474 aa19.3■□□□□ 0.68
CHTOP-201ENST00000368686 DCAF12L1Q5VU92 463 aa19.3■□□□□ 0.68
CHTOP-201ENST00000368686 NCSTNQ92542 709 aa19.3■□□□□ 0.68
CHTOP-201ENST00000368686 DENND2DQ9H6A0 471 aaPredicted RBP19.3■□□□□ 0.68
CHTOP-201ENST00000368686 DNAAF2Q9NVR5 837 aaKnown RBP19.3■□□□□ 0.68
CHTOP-201ENST00000368686 ARMCX3Q9UH62 379 aaPredicted RBP19.3■□□□□ 0.68
CHTOP-201ENST00000368686 USH1CQ9Y6N9 552 aa19.3■□□□□ 0.68
CHTOP-201ENST00000368686 MROH5Q6ZUA9 1318 aa19.3■□□□□ 0.68
CHTOP-201ENST00000368686 PFASO15067 1338 aa19.29■□□□□ 0.68
CHTOP-201ENST00000368686 MAPK13O15264 365 aa19.29■□□□□ 0.68
CHTOP-201ENST00000368686 DCTN3O75935 186 aa19.29■□□□□ 0.68
CHTOP-201ENST00000368686 TECP42680 631 aa19.29■□□□□ 0.68
CHTOP-201ENST00000368686 SERPINB4P48594 390 aa19.29■□□□□ 0.68
CHTOP-201ENST00000368686 STRN3Q13033 797 aa19.29■□□□□ 0.68
CHTOP-201ENST00000368686 SLC7A6OSQ96CW6 309 aaPredicted RBP19.29■□□□□ 0.68
CHTOP-201ENST00000368686 PITPNM3Q9BZ71 974 aa19.29■□□□□ 0.68
CHTOP-201ENST00000368686 SUDS3Q9H7L9 328 aaPredicted RBP19.29■□□□□ 0.68
CHTOP-201ENST00000368686 MAGEB6P1A0A0J9YX57 407 aa19.28■□□□□ 0.68
CHTOP-201ENST00000368686 ENTPD5O75356 428 aa19.28■□□□□ 0.68
CHTOP-201ENST00000368686 KRT13P13646 458 aa19.28■□□□□ 0.68
CHTOP-201ENST00000368686 CYP7A1P22680 504 aa19.28■□□□□ 0.68
CHTOP-201ENST00000368686 EPHB2P29323 1055 aa19.28■□□□□ 0.68
CHTOP-201ENST00000368686 GRB10Q13322 594 aa19.28■□□□□ 0.68
CHTOP-201ENST00000368686 LRRC41Q15345 812 aa19.28■□□□□ 0.68
CHTOP-201ENST00000368686 LONRF1Q17RB8 773 aa19.28■□□□□ 0.68
CHTOP-201ENST00000368686 SPDYAQ5MJ70 313 aa19.28■□□□□ 0.68
CHTOP-201ENST00000368686 GATA6Q92908 595 aa19.28■□□□□ 0.68
CHTOP-201ENST00000368686 CCDC28BQ9BUN5 200 aa19.28■□□□□ 0.68
CHTOP-201ENST00000368686 KIAA1683Q9H0B3 1180 aa19.28■□□□□ 0.68
CHTOP-201ENST00000368686 MLXIPLQ9NP71 852 aa19.28■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms