RNA–Protein interactions for RNA: ENST00000368530.6

TPM3-210, Transcript of tropomyosin 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TPM3, Length 1,523 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-210ENST00000368530 PLCB2Q00722 1185 aa11.13□□□□□ -0.63
TPM3-210ENST00000368530 CCDC173Q0VFZ6 552 aa11.13□□□□□ -0.63
TPM3-210ENST00000368530 ADAM15Q13444 863 aa11.13□□□□□ -0.63
TPM3-210ENST00000368530 ZRSR1Q15695 479 aaKnown RBP11.13□□□□□ -0.63
TPM3-210ENST00000368530 ISM2Q6H9L7 571 aa11.13□□□□□ -0.63
TPM3-210ENST00000368530 NEK8Q86SG6 692 aa11.13□□□□□ -0.63
TPM3-210ENST00000368530 LUZP1Q86V48 1076 aa11.13□□□□□ -0.63
TPM3-210ENST00000368530 GRAMD1CQ8IYS0 662 aa11.13□□□□□ -0.63
TPM3-210ENST00000368530 C4orf32Q8N8J7 132 aa11.13□□□□□ -0.63
TPM3-210ENST00000368530 FAM200AQ8TCP9 573 aa11.13□□□□□ -0.63
TPM3-210ENST00000368530 DHX58Q96C10 678 aa11.13□□□□□ -0.63
TPM3-210ENST00000368530 C11orf84Q9BUA3 381 aaPredicted RBP11.13□□□□□ -0.63
TPM3-210ENST00000368530 CBX8Q9HC52 389 aa11.13□□□□□ -0.63
TPM3-210ENST00000368530 JADE2Q9NQC1 790 aa11.13□□□□□ -0.63
TPM3-210ENST00000368530 TUBE1Q9UJT0 475 aa11.13□□□□□ -0.63
TPM3-210ENST00000368530 PLAGL2Q9UPG8 496 aa11.13□□□□□ -0.63
TPM3-210ENST00000368530 CDY2AQ9Y6F7 541 aa11.13□□□□□ -0.63
TPM3-210ENST00000368530 MORC2Q9Y6X9 1032 aaPredicted RBP11.13□□□□□ -0.63
TPM3-210ENST00000368530 ATG2AQ2TAZ0 1938 aa11.13□□□□□ -0.63
TPM3-210ENST00000368530 RALGAPA2Q2PPJ7 1873 aa11.12□□□□□ -0.63
TPM3-210ENST00000368530 NLRC5Q86WI3 1866 aa11.12□□□□□ -0.63
TPM3-210ENST00000368530 A0A087X0B3 334 aa11.12□□□□□ -0.63
TPM3-210ENST00000368530 MAFGO15525 162 aa11.12□□□□□ -0.63
TPM3-210ENST00000368530 CD52P31358 61 aa11.12□□□□□ -0.63
TPM3-210ENST00000368530 UVSSAQ2YD98 709 aa11.12□□□□□ -0.63
TPM3-210ENST00000368530 TSHZ1Q6ZSZ6 1077 aa11.12□□□□□ -0.63
TPM3-210ENST00000368530 EP400NLQ6ZTU2 488 aa11.12□□□□□ -0.63
TPM3-210ENST00000368530 ALYREFQ86V81 257 aaKnown RBP11.12□□□□□ -0.63
TPM3-210ENST00000368530 SPPL3Q8TCT6 385 aa11.12□□□□□ -0.63
TPM3-210ENST00000368530 P2RX5Q93086 422 aa11.12□□□□□ -0.63
TPM3-210ENST00000368530 CDHR1Q96JP9 859 aa11.12□□□□□ -0.63
TPM3-210ENST00000368530 MSLNLQ96KJ4 702 aa11.12□□□□□ -0.63
TPM3-210ENST00000368530 PLVAPQ9BX97 442 aa11.12□□□□□ -0.63
TPM3-210ENST00000368530 SMARCAD1Q9H4L7 1026 aa11.12□□□□□ -0.63
TPM3-210ENST00000368530 ALG13Q9NP73 1137 aaKnown RBP11.12□□□□□ -0.63
TPM3-210ENST00000368530 ANO10Q9NW15 660 aa11.12□□□□□ -0.63
TPM3-210ENST00000368530 KIAA1468Q9P260 1216 aa11.12□□□□□ -0.63
TPM3-210ENST00000368530 USP25Q9UHP3 1055 aa11.12□□□□□ -0.63
TPM3-210ENST00000368530 RWDD3Q9Y3V2 267 aa11.12□□□□□ -0.63
TPM3-210ENST00000368530 MRPL42Q9Y6G3 142 aaKnown RBP11.12□□□□□ -0.63
TPM3-210ENST00000368530 SQORQ9Y6N5 450 aa11.12□□□□□ -0.63
TPM3-210ENST00000368530 TTC3P53804 2025 aa11.12□□□□□ -0.63
TPM3-210ENST00000368530 WDFY4Q6ZS81 3184 aa11.12□□□□□ -0.63
TPM3-210ENST00000368530 NEMFO60524 1076 aa11.11□□□□□ -0.63
TPM3-210ENST00000368530 ITGB1P05556 798 aa11.11□□□□□ -0.63
TPM3-210ENST00000368530 CDC25AP30304 524 aa11.11□□□□□ -0.63
TPM3-210ENST00000368530 ZNF165P49910 485 aa11.11□□□□□ -0.63
TPM3-210ENST00000368530 MRPS6P82932 125 aaKnown RBP11.11□□□□□ -0.63
TPM3-210ENST00000368530 MTMR1Q13613 665 aa11.11□□□□□ -0.63
TPM3-210ENST00000368530 BTG3Q14201 252 aaPredicted RBP11.11□□□□□ -0.63
TPM3-210ENST00000368530 CLUL1Q15846 466 aa11.11□□□□□ -0.63
TPM3-210ENST00000368530 DTHD1Q6ZMT9 781 aa11.11□□□□□ -0.63
TPM3-210ENST00000368530 RSPH3Q86UC2 560 aa11.11□□□□□ -0.63
TPM3-210ENST00000368530 CYP2W1Q8TAV3 490 aa11.11□□□□□ -0.63
TPM3-210ENST00000368530 BBXQ8WY36 941 aaPredicted RBP11.11□□□□□ -0.63
TPM3-210ENST00000368530 PKD2L1Q9P0L9 805 aa11.11□□□□□ -0.63
TPM3-210ENST00000368530 CLEC1BQ9P126 229 aa11.11□□□□□ -0.63
TPM3-210ENST00000368530 PADI3Q9ULW8 664 aa11.11□□□□□ -0.63
TPM3-210ENST00000368530 FAM50BQ9Y247 325 aa11.11□□□□□ -0.63
TPM3-210ENST00000368530 RRN3P2A6NIE6 340 aa11.1□□□□□ -0.63
TPM3-210ENST00000368530 PP2D1A8MPX8 630 aa11.1□□□□□ -0.63
TPM3-210ENST00000368530 ACTN4O43707 911 aaKnown RBP11.1□□□□□ -0.63
TPM3-210ENST00000368530 ATG7O95352 703 aa11.1□□□□□ -0.63
TPM3-210ENST00000368530 TDP2O95551 362 aa11.1□□□□□ -0.63
TPM3-210ENST00000368530 EYA4O95677 639 aa11.1□□□□□ -0.63
TPM3-210ENST00000368530 OR52Z1P0C646 297 aa11.1□□□□□ -0.63
TPM3-210ENST00000368530 CLK2P49760 499 aaKnown RBP11.1□□□□□ -0.63
TPM3-210ENST00000368530 PLCB4Q15147 1175 aa11.1□□□□□ -0.63
TPM3-210ENST00000368530 DPCR1Q3MIW9 517 aa11.1□□□□□ -0.63
TPM3-210ENST00000368530 HERC4Q5GLZ8 1057 aaPredicted RBP11.1□□□□□ -0.63
TPM3-210ENST00000368530 ARL6IP4Q66PJ3 421 aaKnown RBP11.1□□□□□ -0.63
TPM3-210ENST00000368530 HFE2Q6ZVN8 426 aa11.1□□□□□ -0.63
TPM3-210ENST00000368530 CMTR2Q8IYT2 770 aaKnown RBP11.1□□□□□ -0.63
TPM3-210ENST00000368530 TRAPPC12Q8WVT3 735 aa11.1□□□□□ -0.63
TPM3-210ENST00000368530 GLG1Q92896 1179 aa11.1□□□□□ -0.63
TPM3-210ENST00000368530 FBXL18Q96ME1 805 aa11.1□□□□□ -0.63
TPM3-210ENST00000368530 UIMC1Q96RL1 719 aa11.1□□□□□ -0.63
TPM3-210ENST00000368530 PPP1R9BQ96SB3 815 aa11.1□□□□□ -0.63
TPM3-210ENST00000368530 TMX1Q9H3N1 280 aa11.1□□□□□ -0.63
TPM3-210ENST00000368530 KCNH7Q9NS40 1196 aa11.1□□□□□ -0.63
TPM3-210ENST00000368530 PCDHA2Q9Y5H9 948 aa11.1□□□□□ -0.63
TPM3-210ENST00000368530 IGSF9BQ9UPX0 1349 aa11.1□□□□□ -0.63
TPM3-210ENST00000368530 SLC37A4O43826 429 aa11.09□□□□□ -0.63
TPM3-210ENST00000368530 ARP10275 920 aa11.09□□□□□ -0.63
TPM3-210ENST00000368530 LONP1P36776 959 aaKnown RBP11.09□□□□□ -0.63
TPM3-210ENST00000368530 AFMP43652 599 aa11.09□□□□□ -0.63
TPM3-210ENST00000368530 NLRP12P59046 1061 aa11.09□□□□□ -0.63
TPM3-210ENST00000368530 IGBP1P78318 339 aa11.09□□□□□ -0.63
TPM3-210ENST00000368530 NHLH1Q02575 133 aa11.09□□□□□ -0.63
TPM3-210ENST00000368530 ITGB3BPQ13352 177 aaPredicted RBP11.09□□□□□ -0.63
TPM3-210ENST00000368530 SMAD4Q13485 552 aaKnown RBP11.09□□□□□ -0.63
TPM3-210ENST00000368530 POSTNQ15063 836 aa11.09□□□□□ -0.63
TPM3-210ENST00000368530 NAALADL2Q58DX5 795 aa11.09□□□□□ -0.63
TPM3-210ENST00000368530 IER5Q5VY09 327 aa11.09□□□□□ -0.63
TPM3-210ENST00000368530 PLPPR4Q7Z2D5 763 aa11.09□□□□□ -0.63
TPM3-210ENST00000368530 ADGRD2Q7Z7M1 963 aa11.09□□□□□ -0.63
TPM3-210ENST00000368530 RNF135Q8IUD6 432 aa11.09□□□□□ -0.63
TPM3-210ENST00000368530 NPAS4Q8IUM7 802 aa11.09□□□□□ -0.63
TPM3-210ENST00000368530 CEP57L1Q8IYX8 460 aa11.09□□□□□ -0.63
TPM3-210ENST00000368530 RASSF8Q8NHQ8 419 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms