RNA–Protein interactions for RNA: ENST00000368291.6

ECHDC1-203, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2 BASIC

Gene ECHDC1, Length 1,354 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-203ENST00000368291 CDX2Q99626 313 aaPredicted RBP24.94■■□□□ 1.58
ECHDC1-203ENST00000368291 BHMT2Q9H2M3 363 aa24.94■■□□□ 1.58
ECHDC1-203ENST00000368291 MINDY3Q9H8M7 445 aa24.94■■□□□ 1.58
ECHDC1-203ENST00000368291 RC3H2Q9HBD1 1191 aaKnown RBP24.94■■□□□ 1.58
ECHDC1-203ENST00000368291 KIAA1671Q9BY89 1806 aa24.93■■□□□ 1.58
ECHDC1-203ENST00000368291 GLRA2P23416 452 aa24.93■■□□□ 1.58
ECHDC1-203ENST00000368291 MARCKSP29966 332 aaPredicted RBP24.93■■□□□ 1.58
ECHDC1-203ENST00000368291 MXD4Q14582 209 aaPredicted RBP24.93■■□□□ 1.58
ECHDC1-203ENST00000368291 MAEAQ7L5Y9 396 aa24.93■■□□□ 1.58
ECHDC1-203ENST00000368291 RNF149Q8NC42 400 aa24.93■■□□□ 1.58
ECHDC1-203ENST00000368291 POLR3FQ9H1D9 316 aaPredicted RBP24.93■■□□□ 1.58
ECHDC1-203ENST00000368291 FBXO2Q9UK22 296 aaPredicted RBP24.93■■□□□ 1.58
ECHDC1-203ENST00000368291 RALGAPA2Q2PPJ7 1873 aa24.93■■□□□ 1.58
ECHDC1-203ENST00000368291 LINC01553A4QN01 128 aa24.93■■□□□ 1.58
ECHDC1-203ENST00000368291 EYA4O95677 639 aa24.93■■□□□ 1.58
ECHDC1-203ENST00000368291 F13A1P00488 732 aa24.93■■□□□ 1.58
ECHDC1-203ENST00000368291 CYP11B2P19099 503 aa24.93■■□□□ 1.58
ECHDC1-203ENST00000368291 LONP1P36776 959 aaKnown RBP24.93■■□□□ 1.58
ECHDC1-203ENST00000368291 SARSP49591 514 aaKnown RBP24.93■■□□□ 1.58
ECHDC1-203ENST00000368291 CAPSQ13938 189 aa24.93■■□□□ 1.58
ECHDC1-203ENST00000368291 MCPH1Q8NEM0 835 aa24.93■■□□□ 1.58
ECHDC1-203ENST00000368291 ZNF689Q96CS4 500 aaPredicted RBP24.93■■□□□ 1.58
ECHDC1-203ENST00000368291 INO80BQ9C086 356 aaPredicted RBP24.93■■□□□ 1.58
ECHDC1-203ENST00000368291 C1orf112Q9NSG2 853 aa24.93■■□□□ 1.58
ECHDC1-203ENST00000368291 DNM3Q9UQ16 869 aa24.93■■□□□ 1.58
ECHDC1-203ENST00000368291 MORC2Q9Y6X9 1032 aaPredicted RBP24.93■■□□□ 1.58
ECHDC1-203ENST00000368291 COL4A4P53420 1690 aaPredicted RBP24.92■■□□□ 1.58
ECHDC1-203ENST00000368291 DENND3A2RUS2 1198 aa24.92■■□□□ 1.58
ECHDC1-203ENST00000368291 DGKIO75912 1065 aa24.92■■□□□ 1.58
ECHDC1-203ENST00000368291 NASPP49321 788 aaPredicted RBP24.92■■□□□ 1.58
ECHDC1-203ENST00000368291 PTENP60484 403 aa24.92■■□□□ 1.58
ECHDC1-203ENST00000368291 FAM189BP81408 668 aa24.92■■□□□ 1.58
ECHDC1-203ENST00000368291 POU5F1BQ06416 359 aa24.92■■□□□ 1.58
ECHDC1-203ENST00000368291 SLC39A14Q15043 492 aa24.92■■□□□ 1.58
ECHDC1-203ENST00000368291 SLC24A5Q71RS6 500 aa24.92■■□□□ 1.58
ECHDC1-203ENST00000368291 SRGAP1Q7Z6B7 1085 aa24.92■■□□□ 1.58
ECHDC1-203ENST00000368291 CABP7Q86V35 215 aa24.92■■□□□ 1.58
ECHDC1-203ENST00000368291 IFNLR1Q8IU57 520 aaPredicted RBP24.92■■□□□ 1.58
ECHDC1-203ENST00000368291 NPAS4Q8IUM7 802 aa24.92■■□□□ 1.58
ECHDC1-203ENST00000368291 LRRC15Q8TF66 581 aa24.92■■□□□ 1.58
ECHDC1-203ENST00000368291 YME1L1Q96TA2 773 aa24.92■■□□□ 1.58
ECHDC1-203ENST00000368291 PLIN2Q99541 437 aa24.92■■□□□ 1.58
ECHDC1-203ENST00000368291 SFPQP23246 707 aaKnown RBP eCLIP24.91■■□□□ 1.58
ECHDC1-203ENST00000368291 ZRSR1Q15695 479 aaKnown RBP24.91■■□□□ 1.58
ECHDC1-203ENST00000368291 TMEM119Q4V9L6 283 aa24.91■■□□□ 1.58
ECHDC1-203ENST00000368291 MYLIPQ8WY64 445 aa24.91■■□□□ 1.58
ECHDC1-203ENST00000368291 BSNDQ8WZ55 320 aa24.91■■□□□ 1.58
ECHDC1-203ENST00000368291 CSRNP2Q9H175 543 aa24.91■■□□□ 1.58
ECHDC1-203ENST00000368291 PRDM12Q9H4Q4 367 aa24.91■■□□□ 1.58
ECHDC1-203ENST00000368291 CERS4Q9HA82 394 aa24.91■■□□□ 1.58
ECHDC1-203ENST00000368291 SRPRBQ9Y5M8 271 aaKnown RBP24.91■■□□□ 1.58
ECHDC1-203ENST00000368291 TCHHQ07283 1943 aa24.9■■□□□ 1.58
ECHDC1-203ENST00000368291 EPOPA6NHQ4 379 aa24.9■■□□□ 1.58
ECHDC1-203ENST00000368291 USP49Q70CQ1 688 aa24.9■■□□□ 1.58
ECHDC1-203ENST00000368291 NT5C3AQ9H0P0 336 aa24.9■■□□□ 1.58
ECHDC1-203ENST00000368291 POLD4Q9HCU8 107 aa24.9■■□□□ 1.58
ECHDC1-203ENST00000368291 TFIP11Q9UBB9 837 aaKnown RBP24.9■■□□□ 1.58
ECHDC1-203ENST00000368291 SLC26A4O43511 780 aa24.89■■□□□ 1.57
ECHDC1-203ENST00000368291 ZSCAN20P17040 1043 aaPredicted RBP24.89■■□□□ 1.57
ECHDC1-203ENST00000368291 SPECC1Q5M775 1068 aa24.89■■□□□ 1.57
ECHDC1-203ENST00000368291 FAM102BQ5T8I3 360 aa24.89■■□□□ 1.57
ECHDC1-203ENST00000368291 CATSPER4Q7RTX7 472 aa24.89■■□□□ 1.57
ECHDC1-203ENST00000368291 KCTD17Q8N5Z5 321 aa24.89■■□□□ 1.57
ECHDC1-203ENST00000368291 LINC00301Q8NCQ3 95 aa24.89■■□□□ 1.57
ECHDC1-203ENST00000368291 CLIC6Q96NY7 704 aa24.89■■□□□ 1.57
ECHDC1-203ENST00000368291 NFKBIZQ9BYH8 718 aa24.89■■□□□ 1.57
ECHDC1-203ENST00000368291 CHST12Q9NRB3 414 aa24.89■■□□□ 1.57
ECHDC1-203ENST00000368291 ZDHHC9Q9Y397 364 aa24.89■■□□□ 1.57
ECHDC1-203ENST00000368291 COL6A3P12111 3177 aa24.88■■□□□ 1.57
ECHDC1-203ENST00000368291 LINC00271P0C7V0 271 aa24.88■■□□□ 1.57
ECHDC1-203ENST00000368291 STAG3L1P0CL83 205 aa24.88■■□□□ 1.57
ECHDC1-203ENST00000368291 UBA7P41226 1012 aa24.88■■□□□ 1.57
ECHDC1-203ENST00000368291 PHKA2P46019 1235 aa24.88■■□□□ 1.57
ECHDC1-203ENST00000368291 GATMP50440 423 aa24.88■■□□□ 1.57
ECHDC1-203ENST00000368291 TFDP1Q14186 410 aa24.88■■□□□ 1.57
ECHDC1-203ENST00000368291 RINT1Q6NUQ1 792 aa24.88■■□□□ 1.57
ECHDC1-203ENST00000368291 C1orf186Q6ZWK4 172 aa24.88■■□□□ 1.57
ECHDC1-203ENST00000368291 EPSTI1Q96J88 318 aa24.88■■□□□ 1.57
ECHDC1-203ENST00000368291 RUSC1Q9BVN2 902 aa24.88■■□□□ 1.57
ECHDC1-203ENST00000368291 CCSER1Q9C0I3 900 aa24.88■■□□□ 1.57
ECHDC1-203ENST00000368291 AGPAT5Q9NUQ2 364 aa24.88■■□□□ 1.57
ECHDC1-203ENST00000368291 ADGRA3Q8IWK6 1321 aa24.88■■□□□ 1.57
ECHDC1-203ENST00000368291 IBSPP21815 317 aaPredicted RBP24.87■■□□□ 1.57
ECHDC1-203ENST00000368291 HOXA11P31270 313 aaPredicted RBP24.87■■□□□ 1.57
ECHDC1-203ENST00000368291 SLC12A3P55017 1021 aa24.87■■□□□ 1.57
ECHDC1-203ENST00000368291 ERVK-21P61565 698 aa24.87■■□□□ 1.57
ECHDC1-203ENST00000368291 KARSQ15046 597 aaKnown RBP24.87■■□□□ 1.57
ECHDC1-203ENST00000368291 ECHDC2Q86YB7 292 aa24.87■■□□□ 1.57
ECHDC1-203ENST00000368291 DAW1Q8N136 415 aa24.87■■□□□ 1.57
ECHDC1-203ENST00000368291 SYT2Q8N9I0 419 aaPredicted RBP24.87■■□□□ 1.57
ECHDC1-203ENST00000368291 ZNF396Q96N95 335 aaPredicted RBP24.87■■□□□ 1.57
ECHDC1-203ENST00000368291 TRAIPQ9BWF2 469 aa24.87■■□□□ 1.57
ECHDC1-203ENST00000368291 ELAC1Q9H777 363 aaKnown RBP24.87■■□□□ 1.57
ECHDC1-203ENST00000368291 PIN4Q9Y237 131 aaKnown RBP24.87■■□□□ 1.57
ECHDC1-203ENST00000368291 STXBP5LQ9Y2K9 1186 aa24.87■■□□□ 1.57
ECHDC1-203ENST00000368291 PCDHB7Q9Y5E2 793 aa24.87■■□□□ 1.57
ECHDC1-203ENST00000368291 A0A0U1RQF3 1178 aa24.86■■□□□ 1.57
ECHDC1-203ENST00000368291 BRD1O95696 1058 aa24.86■■□□□ 1.57
ECHDC1-203ENST00000368291 MBTD1Q05BQ5 628 aa24.86■■□□□ 1.57
ECHDC1-203ENST00000368291 ADGRE1Q14246 886 aa24.86■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms