RNA–Protein interactions for RNA: ENST00000368045.3

CD48-201, Transcript of CD48 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD48, Length 1,793 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD48-201ENST00000368045 ZFP91Q96JP5 570 aaPredicted RBP15.51■□□□□ 0.07
CD48-201ENST00000368045 RNPC3Q96LT9 517 aaKnown RBP15.51■□□□□ 0.07
CD48-201ENST00000368045 ZNF577Q9BSK1 485 aa15.51■□□□□ 0.07
CD48-201ENST00000368045 GPR88Q9GZN0 384 aa15.51■□□□□ 0.07
CD48-201ENST00000368045 DDX47Q9H0S4 455 aaKnown RBP15.51■□□□□ 0.07
CD48-201ENST00000368045 UNC45AQ9H3U1 944 aa15.51■□□□□ 0.07
CD48-201ENST00000368045 UTP11Q9Y3A2 253 aaKnown RBP15.51■□□□□ 0.07
CD48-201ENST00000368045 NFS1Q9Y697 457 aa15.51■□□□□ 0.07
CD48-201ENST00000368045 ZNF646O15015 1829 aaPredicted RBP15.51■□□□□ 0.07
CD48-201ENST00000368045 GOLGA6L10A0A0M3HER8 536 aa15.5■□□□□ 0.07
CD48-201ENST00000368045 ANKRD62A6NC57 917 aa15.5■□□□□ 0.07
CD48-201ENST00000368045 H0YIN7 160 aa15.5■□□□□ 0.07
CD48-201ENST00000368045 DDX3YO15523 660 aaKnown RBP15.5■□□□□ 0.07
CD48-201ENST00000368045 BCRP11274 1271 aa15.5■□□□□ 0.07
CD48-201ENST00000368045 KRT13P13646 458 aa15.5■□□□□ 0.07
CD48-201ENST00000368045 MDH1P40925 334 aaKnown RBP15.5■□□□□ 0.07
CD48-201ENST00000368045 CETN1Q12798 172 aa15.5■□□□□ 0.07
CD48-201ENST00000368045 ITGB3BPQ13352 177 aaPredicted RBP15.5■□□□□ 0.07
CD48-201ENST00000368045 TTC31Q49AM3 519 aaPredicted RBP15.5■□□□□ 0.07
CD48-201ENST00000368045 CBWD6Q4V339 395 aa15.5■□□□□ 0.07
CD48-201ENST00000368045 CBWD3Q5JTY5 395 aa15.5■□□□□ 0.07
CD48-201ENST00000368045 CBWD5Q5RIA9 395 aa15.5■□□□□ 0.07
CD48-201ENST00000368045 AGBL2Q5U5Z8 902 aa15.5■□□□□ 0.07
CD48-201ENST00000368045 MICALCLQ6ZW33 695 aa15.5■□□□□ 0.07
CD48-201ENST00000368045 SUPT20HQ8NEM7 779 aa15.5■□□□□ 0.07
CD48-201ENST00000368045 RAB17Q9H0T7 212 aa15.5■□□□□ 0.07
CD48-201ENST00000368045 TMEM206Q9H813 350 aa15.5■□□□□ 0.07
CD48-201ENST00000368045 GGA2Q9UJY4 613 aa15.5■□□□□ 0.07
CD48-201ENST00000368045 PFASO15067 1338 aa15.5■□□□□ 0.07
CD48-201ENST00000368045 FAM187AA6NFU0 413 aa15.49■□□□□ 0.07
CD48-201ENST00000368045 EXOC3O60645 756 aa15.49■□□□□ 0.07
CD48-201ENST00000368045 HSPA6P17066 643 aa15.49■□□□□ 0.07
CD48-201ENST00000368045 PTENP60484 403 aa15.49■□□□□ 0.07
CD48-201ENST00000368045 SNRPFP62306 86 aaKnown RBP15.49■□□□□ 0.07
CD48-201ENST00000368045 POU5F1Q01860 360 aaKnown RBP15.49■□□□□ 0.07
CD48-201ENST00000368045 PLS1Q14651 629 aa15.49■□□□□ 0.07
CD48-201ENST00000368045 COG2Q14746 738 aa15.49■□□□□ 0.07
CD48-201ENST00000368045 UAP1Q16222 522 aaPredicted RBP15.49■□□□□ 0.07
CD48-201ENST00000368045 PTGISQ16647 500 aa15.49■□□□□ 0.07
CD48-201ENST00000368045 INTS8Q75QN2 995 aaKnown RBP15.49■□□□□ 0.07
CD48-201ENST00000368045 NIPA1Q7RTP0 329 aa15.49■□□□□ 0.07
CD48-201ENST00000368045 C3orf20Q8ND61 904 aa15.49■□□□□ 0.07
CD48-201ENST00000368045 CNKSR1Q969H4 720 aa15.49■□□□□ 0.07
CD48-201ENST00000368045 LXNQ9BS40 222 aa15.49■□□□□ 0.07
CD48-201ENST00000368045 EFCC1Q9HA90 598 aa15.49■□□□□ 0.07
CD48-201ENST00000368045 POLD4Q9HCU8 107 aa15.49■□□□□ 0.07
CD48-201ENST00000368045 MIF4GDA9UHW6 222 aaKnown RBP15.49■□□□□ 0.07
CD48-201ENST00000368045 PLSCR1O15162 318 aa15.49■□□□□ 0.07
CD48-201ENST00000368045 MAPK13O15264 365 aa15.49■□□□□ 0.07
CD48-201ENST00000368045 PMM2O15305 246 aa15.49■□□□□ 0.07
CD48-201ENST00000368045 HIP1RO75146 1068 aa15.49■□□□□ 0.07
CD48-201ENST00000368045 ITGA4P13612 1032 aa15.49■□□□□ 0.07
CD48-201ENST00000368045 CTNNA1P35221 906 aaKnown RBP15.49■□□□□ 0.07
CD48-201ENST00000368045 ATP1A2P50993 1020 aa15.49■□□□□ 0.07
CD48-201ENST00000368045 MAPK7Q13164 816 aa15.49■□□□□ 0.07
CD48-201ENST00000368045 C11orf63Q6NUN7 778 aa15.49■□□□□ 0.07
CD48-201ENST00000368045 CCDC174Q6PII3 467 aa15.49■□□□□ 0.07
CD48-201ENST00000368045 DNAAF5Q86Y56 855 aa15.49■□□□□ 0.07
CD48-201ENST00000368045 SYCP3Q8IZU3 236 aa15.49■□□□□ 0.07
CD48-201ENST00000368045 FAM151AQ8WW52 585 aa15.49■□□□□ 0.07
CD48-201ENST00000368045 PRMT6Q96LA8 375 aaPredicted RBP15.49■□□□□ 0.07
CD48-201ENST00000368045 MXRA8Q9BRK3 442 aa15.49■□□□□ 0.07
CD48-201ENST00000368045 VCPKMTQ9H867 229 aa15.49■□□□□ 0.07
CD48-201ENST00000368045 QTRT2Q9H974 415 aaKnown RBP15.49■□□□□ 0.07
CD48-201ENST00000368045 SLTMQ9NWH9 1034 aaKnown RBP eCLIP15.49■□□□□ 0.07
CD48-201ENST00000368045 AMACRQ9UHK6 382 aa15.49■□□□□ 0.07
CD48-201ENST00000368045 FEM1BQ9UK73 627 aa15.49■□□□□ 0.07
CD48-201ENST00000368045 ZBTB21Q9ULJ3 1066 aa15.49■□□□□ 0.07
CD48-201ENST00000368045 USP20Q9Y2K6 914 aa15.49■□□□□ 0.07
CD48-201ENST00000368045 IPO5O00410 1097 aaKnown RBP15.48■□□□□ 0.07
CD48-201ENST00000368045 DAPK3O43293 454 aa15.48■□□□□ 0.07
CD48-201ENST00000368045 ERLIN2O94905 339 aa15.48■□□□□ 0.07
CD48-201ENST00000368045 FGGP02679 453 aa15.48■□□□□ 0.07
CD48-201ENST00000368045 TRIM49P0CI25 452 aa15.48■□□□□ 0.07
CD48-201ENST00000368045 TRIM49CP0CI26 452 aa15.48■□□□□ 0.07
CD48-201ENST00000368045 ECE1P42892 770 aa15.48■□□□□ 0.07
CD48-201ENST00000368045 EIF3BP55884 814 aaKnown RBP15.48■□□□□ 0.07
CD48-201ENST00000368045 ZNF844Q08AG5 666 aa15.48■□□□□ 0.07
CD48-201ENST00000368045 DHX34Q14147 1143 aaKnown RBP15.48■□□□□ 0.07
CD48-201ENST00000368045 KIAA1755Q5JYT7 1200 aa15.48■□□□□ 0.07
CD48-201ENST00000368045 TMC3Q7Z5M5 1100 aa15.48■□□□□ 0.07
CD48-201ENST00000368045 LMO3Q8TAP4 145 aa15.48■□□□□ 0.07
CD48-201ENST00000368045 ACER1Q8TDN7 264 aa15.48■□□□□ 0.07
CD48-201ENST00000368045 ACCSQ96QU6 501 aa15.48■□□□□ 0.07
CD48-201ENST00000368045 AGPAT1Q99943 283 aa15.48■□□□□ 0.07
CD48-201ENST00000368045 TIPINQ9BVW5 301 aa15.48■□□□□ 0.07
CD48-201ENST00000368045 OSGEPQ9NPF4 335 aa15.48■□□□□ 0.07
CD48-201ENST00000368045 LARSQ9P2J5 1176 aaKnown RBP15.48■□□□□ 0.07
CD48-201ENST00000368045 WRAP73Q9P2S5 460 aaPredicted RBP15.48■□□□□ 0.07
CD48-201ENST00000368045 DBR1Q9UK59 544 aaKnown RBP15.48■□□□□ 0.07
CD48-201ENST00000368045 SCN9AQ15858 1988 aa15.47■□□□□ 0.07
CD48-201ENST00000368045 ZBTB39O15060 712 aa15.47■□□□□ 0.07
CD48-201ENST00000368045 TTI1O43156 1089 aa15.47■□□□□ 0.07
CD48-201ENST00000368045 ARP10275 920 aa15.47■□□□□ 0.07
CD48-201ENST00000368045 TNIP1Q15025 636 aa15.47■□□□□ 0.07
CD48-201ENST00000368045 AOC3Q16853 763 aa15.47■□□□□ 0.07
CD48-201ENST00000368045 TTC19Q6DKK2 380 aaPredicted RBP15.47■□□□□ 0.07
CD48-201ENST00000368045 YTHDF3Q7Z739 585 aaKnown RBP15.47■□□□□ 0.07
CD48-201ENST00000368045 DDX42Q86XP3 938 aaKnown RBP eCLIP15.47■□□□□ 0.07
CD48-201ENST00000368045 DAW1Q8N136 415 aa15.47■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 66.6 ms