RNA–Protein interactions for RNA: ENST00000368019.5

USF1-201, Transcript of upstream transcription factor 1, humanhuman

TSL 5 BASIC

Gene USF1, Length 998 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-201ENST00000368019 NDUFB10O96000 172 aa12.6□□□□□ -0.39
USF1-201ENST00000368019 PGK1P00558 417 aa12.6□□□□□ -0.39
USF1-201ENST00000368019 MYCNP04198 464 aaPredicted RBP12.6□□□□□ -0.39
USF1-201ENST00000368019 PLCG1P19174 1290 aa12.6□□□□□ -0.39
USF1-201ENST00000368019 GNA11P29992 359 aa12.6□□□□□ -0.39
USF1-201ENST00000368019 GTF2A1P52655 376 aaPredicted RBP12.6□□□□□ -0.39
USF1-201ENST00000368019 ASIC1P78348 528 aa12.6□□□□□ -0.39
USF1-201ENST00000368019 KLRC3Q07444 240 aa12.6□□□□□ -0.39
USF1-201ENST00000368019 DRP2Q13474 957 aa12.6□□□□□ -0.39
USF1-201ENST00000368019 PLCB4Q15147 1175 aa12.6□□□□□ -0.39
USF1-201ENST00000368019 CCDC96Q2M329 555 aa12.6□□□□□ -0.39
USF1-201ENST00000368019 CFAP221Q4G0U5 840 aa12.6□□□□□ -0.39
USF1-201ENST00000368019 CCDC181Q5TID7 509 aa12.6□□□□□ -0.39
USF1-201ENST00000368019 MCTP2Q6DN12 878 aa12.6□□□□□ -0.39
USF1-201ENST00000368019 C8orf74Q6P047 294 aa12.6□□□□□ -0.39
USF1-201ENST00000368019 PDXDC1Q6P996 788 aa12.6□□□□□ -0.39
USF1-201ENST00000368019 MAMDC4Q6UXC1 1216 aa12.6□□□□□ -0.39
USF1-201ENST00000368019 MKL1Q969V6 931 aa12.6□□□□□ -0.39
USF1-201ENST00000368019 CALML4Q96GE6 196 aa12.6□□□□□ -0.39
USF1-201ENST00000368019 PCMTD1Q96MG8 357 aaPredicted RBP12.6□□□□□ -0.39
USF1-201ENST00000368019 NOX5Q96PH1 765 aa12.6□□□□□ -0.39
USF1-201ENST00000368019 LRRC1Q9BTT6 524 aa12.6□□□□□ -0.39
USF1-201ENST00000368019 TEX13BQ9BXU2 312 aa12.6□□□□□ -0.39
USF1-201ENST00000368019 TMEM60Q9H2L4 133 aa12.6□□□□□ -0.39
USF1-201ENST00000368019 NDST4Q9H3R1 872 aa12.6□□□□□ -0.39
USF1-201ENST00000368019 A1CFQ9NQ94 594 aaKnown RBP12.6□□□□□ -0.39
USF1-201ENST00000368019 PRDM5Q9NQX1 630 aaPredicted RBP12.6□□□□□ -0.39
USF1-201ENST00000368019 LRWD1Q9UFC0 647 aa12.6□□□□□ -0.39
USF1-201ENST00000368019 MAPK8IP1Q9UQF2 711 aa12.6□□□□□ -0.39
USF1-201ENST00000368019 CAPN6Q9Y6Q1 641 aa12.6□□□□□ -0.39
USF1-201ENST00000368019 FAM169AQ9Y6X4 670 aa12.6□□□□□ -0.39
USF1-201ENST00000368019 MYO9BQ13459 2157 aa12.59□□□□□ -0.39
USF1-201ENST00000368019 CDH23Q9H251 3354 aa12.59□□□□□ -0.39
USF1-201ENST00000368019 A0A1W2PQ45 241 aaPredicted RBP12.59□□□□□ -0.39
USF1-201ENST00000368019 A0A1W2PQY0 241 aa12.59□□□□□ -0.39
USF1-201ENST00000368019 MACROD2A1Z1Q3 448 aa12.59□□□□□ -0.39
USF1-201ENST00000368019 PES1O00541 588 aaKnown RBP12.59□□□□□ -0.39
USF1-201ENST00000368019 KIAA0355O15063 1070 aa12.59□□□□□ -0.39
USF1-201ENST00000368019 AKR1B10O60218 316 aa12.59□□□□□ -0.39
USF1-201ENST00000368019 GNA14O95837 355 aa12.59□□□□□ -0.39
USF1-201ENST00000368019 AKR1A1P14550 325 aa12.59□□□□□ -0.39
USF1-201ENST00000368019 ANXA13P27216 316 aa12.59□□□□□ -0.39
USF1-201ENST00000368019 MAGEA1P43355 309 aa12.59□□□□□ -0.39
USF1-201ENST00000368019 FXR2P51116 673 aaKnown RBP eCLIP12.59□□□□□ -0.39
USF1-201ENST00000368019 GNGT1P63211 74 aa12.59□□□□□ -0.39
USF1-201ENST00000368019 NONOQ15233 471 aaKnown RBP eCLIP12.59□□□□□ -0.39
USF1-201ENST00000368019 C10orf76Q5T2E6 689 aa12.59□□□□□ -0.39
USF1-201ENST00000368019 ZNF697Q5TEC3 545 aa12.59□□□□□ -0.39
USF1-201ENST00000368019 CCSAPQ6IQ19 270 aaPredicted RBP12.59□□□□□ -0.39
USF1-201ENST00000368019 LRIG3Q6UXM1 1119 aa12.59□□□□□ -0.39
USF1-201ENST00000368019 RNF180Q86T96 592 aa12.59□□□□□ -0.39
USF1-201ENST00000368019 CNPY4Q8N129 248 aa12.59□□□□□ -0.39
USF1-201ENST00000368019 ARFGAP2Q8N6H7 521 aa12.59□□□□□ -0.39
USF1-201ENST00000368019 PRPF38AQ8NAV1 312 aaKnown RBP12.59□□□□□ -0.39
USF1-201ENST00000368019 PNMA1Q8ND90 353 aa12.59□□□□□ -0.39
USF1-201ENST00000368019 KLHDC9Q8NEP7 349 aa12.59□□□□□ -0.39
USF1-201ENST00000368019 BAP1Q92560 729 aa12.59□□□□□ -0.39
USF1-201ENST00000368019 FAM161BQ96MY7 647 aa12.59□□□□□ -0.39
USF1-201ENST00000368019 TSG101Q99816 390 aa12.59□□□□□ -0.39
USF1-201ENST00000368019 TSEN34Q9BSV6 310 aaKnown RBP12.59□□□□□ -0.39
USF1-201ENST00000368019 SEMA6BQ9H3T3 888 aa12.59□□□□□ -0.39
USF1-201ENST00000368019 C6orf50Q9HD87 102 aa12.59□□□□□ -0.39
USF1-201ENST00000368019 GEMIN8Q9NWZ8 242 aaKnown RBP12.59□□□□□ -0.39
USF1-201ENST00000368019 CEP72Q9P209 647 aa12.59□□□□□ -0.39
USF1-201ENST00000368019 DMGDHQ9UI17 866 aaKnown RBP12.59□□□□□ -0.39
USF1-201ENST00000368019 MAD2L2Q9UI95 211 aa12.59□□□□□ -0.39
USF1-201ENST00000368019 SYNGAP1Q96PV0 1343 aa12.59□□□□□ -0.39
USF1-201ENST00000368019 MYH7BA7E2Y1 1941 aa12.58□□□□□ -0.39
USF1-201ENST00000368019 HMGB1P1B2RPK0 211 aaPredicted RBP12.58□□□□□ -0.4
USF1-201ENST00000368019 ZNF185O15231 689 aa12.58□□□□□ -0.4
USF1-201ENST00000368019 FSBPO95073 299 aa12.58□□□□□ -0.4
USF1-201ENST00000368019 CLTBP09497 229 aa12.58□□□□□ -0.4
USF1-201ENST00000368019 EIF4A3P38919 411 aaKnown RBP12.58□□□□□ -0.4
USF1-201ENST00000368019 CCT5P48643 541 aa12.58□□□□□ -0.4
USF1-201ENST00000368019 MARSP56192 900 aaKnown RBP12.58□□□□□ -0.4
USF1-201ENST00000368019 SMAD3P84022 425 aaKnown RBP12.58□□□□□ -0.4
USF1-201ENST00000368019 EHHADHQ08426 723 aa12.58□□□□□ -0.4
USF1-201ENST00000368019 SNRNP48Q6IEG0 339 aaKnown RBP12.58□□□□□ -0.4
USF1-201ENST00000368019 SV2BQ7L1I2 683 aa12.58□□□□□ -0.4
USF1-201ENST00000368019 ANKRD33Q7Z3H0 272 aa12.58□□□□□ -0.4
USF1-201ENST00000368019 ZNF467Q7Z7K2 595 aaPredicted RBP12.58□□□□□ -0.4
USF1-201ENST00000368019 NEK8Q86SG6 692 aa12.58□□□□□ -0.4
USF1-201ENST00000368019 IQCKQ8N0W5 287 aa12.58□□□□□ -0.4
USF1-201ENST00000368019 MICALL1Q8N3F8 863 aa12.58□□□□□ -0.4
USF1-201ENST00000368019 KIAA0895Q8NCT3 520 aa12.58□□□□□ -0.4
USF1-201ENST00000368019 BCAS4Q8TDM0 211 aa12.58□□□□□ -0.4
USF1-201ENST00000368019 LENG1Q96BZ8 264 aaPredicted RBP12.58□□□□□ -0.4
USF1-201ENST00000368019 FGD4Q96M96 766 aa12.58□□□□□ -0.4
USF1-201ENST00000368019 CEP63Q96MT8 703 aa12.58□□□□□ -0.4
USF1-201ENST00000368019 TOX2Q96NM4 488 aa12.58□□□□□ -0.4
USF1-201ENST00000368019 CDX2Q99626 313 aaPredicted RBP12.58□□□□□ -0.4
USF1-201ENST00000368019 TLR10Q9BXR5 811 aa12.58□□□□□ -0.4
USF1-201ENST00000368019 RAB34Q9BZG1 259 aa12.58□□□□□ -0.4
USF1-201ENST00000368019 MKNK2Q9HBH9 465 aa12.58□□□□□ -0.4
USF1-201ENST00000368019 ZNF287Q9HBT7 754 aa12.58□□□□□ -0.4
USF1-201ENST00000368019 RNF216Q9NWF9 866 aaPredicted RBP12.58□□□□□ -0.4
USF1-201ENST00000368019 SYNPO2Q9UMS6 1093 aa12.58□□□□□ -0.4
USF1-201ENST00000368019 BHMG1C9JSJ3 638 aaPredicted RBP12.57□□□□□ -0.4
USF1-201ENST00000368019 RAD21O60216 631 aa12.57□□□□□ -0.4
USF1-201ENST00000368019 MOCS3O95396 460 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms