RNA–Protein interactions for RNA: ENST00000367569.3

SF3B5-201, Transcript of splicing factor 3b subunit 5, humanhuman

APPRIS P1 BASIC

Gene SF3B5, Length 693 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B5-201ENST00000367569 KHSRPQ92945 711 aaKnown RBP eCLIP16.35■□□□□ 0.21
SF3B5-201ENST00000367569 FDXACB1Q9BRP7 624 aaPredicted RBP16.35■□□□□ 0.21
SF3B5-201ENST00000367569 CD320Q9NPF0 282 aa16.35■□□□□ 0.21
SF3B5-201ENST00000367569 XPNPEP1Q9NQW7 623 aa16.35■□□□□ 0.21
SF3B5-201ENST00000367569 ST3GAL5Q9UNP4 418 aa16.35■□□□□ 0.21
SF3B5-201ENST00000367569 MTMR6Q9Y217 621 aa16.35■□□□□ 0.21
SF3B5-201ENST00000367569 FNDC1Q4ZHG4 1894 aaPredicted RBP16.34■□□□□ 0.21
SF3B5-201ENST00000367569 IGKV6-21A0A0C4DH24 114 aa16.34■□□□□ 0.21
SF3B5-201ENST00000367569 VWA3AA6NCI4 1184 aa16.34■□□□□ 0.21
SF3B5-201ENST00000367569 RPLP2P05387 115 aaKnown RBP16.34■□□□□ 0.21
SF3B5-201ENST00000367569 FXR2P51116 673 aaKnown RBP eCLIP16.34■□□□□ 0.21
SF3B5-201ENST00000367569 CRYBB1P53674 252 aaPredicted RBP16.34■□□□□ 0.21
SF3B5-201ENST00000367569 ATP2C1P98194 919 aaPredicted RBP16.34■□□□□ 0.21
SF3B5-201ENST00000367569 CEBPZQ03701 1054 aaKnown RBP16.34■□□□□ 0.21
SF3B5-201ENST00000367569 TCEAL5Q5H9L2 206 aa16.34■□□□□ 0.21
SF3B5-201ENST00000367569 ERMNQ8TAM6 284 aa16.34■□□□□ 0.21
SF3B5-201ENST00000367569 ZNF689Q96CS4 500 aaPredicted RBP16.34■□□□□ 0.21
SF3B5-201ENST00000367569 INTS4Q96HW7 963 aaKnown RBP16.34■□□□□ 0.21
SF3B5-201ENST00000367569 PLIN2Q99541 437 aa16.34■□□□□ 0.21
SF3B5-201ENST00000367569 C1QTNF1Q9BXJ1 281 aa16.34■□□□□ 0.21
SF3B5-201ENST00000367569 DHX33Q9H6R0 707 aaKnown RBP16.34■□□□□ 0.21
SF3B5-201ENST00000367569 GPRC5CQ9NQ84 441 aa16.34■□□□□ 0.21
SF3B5-201ENST00000367569 PDCP20941 246 aa16.33■□□□□ 0.2
SF3B5-201ENST00000367569 CTNNB1P35222 781 aa16.33■□□□□ 0.2
SF3B5-201ENST00000367569 BMPR1AP36894 532 aa16.33■□□□□ 0.2
SF3B5-201ENST00000367569 RARRES1P49788 294 aa16.33■□□□□ 0.2
SF3B5-201ENST00000367569 GRIN1Q05586 938 aa16.33■□□□□ 0.2
SF3B5-201ENST00000367569 FOXD4L6Q3SYB3 417 aaPredicted RBP16.33■□□□□ 0.2
SF3B5-201ENST00000367569 PAN2Q504Q3 1202 aaKnown RBP16.33■□□□□ 0.2
SF3B5-201ENST00000367569 TIGD5Q53EQ6 642 aa16.33■□□□□ 0.2
SF3B5-201ENST00000367569 FOXD4L3Q6VB84 417 aaPredicted RBP16.33■□□□□ 0.2
SF3B5-201ENST00000367569 OTUD6AQ7L8S5 288 aa16.33■□□□□ 0.2
SF3B5-201ENST00000367569 BRAPQ7Z569 592 aa16.33■□□□□ 0.2
SF3B5-201ENST00000367569 MTRQ99707 1265 aa16.33■□□□□ 0.2
SF3B5-201ENST00000367569 POLD4Q9HCU8 107 aa16.33■□□□□ 0.2
SF3B5-201ENST00000367569 TUFT1Q9NNX1 390 aa16.33■□□□□ 0.2
SF3B5-201ENST00000367569 COL4A3BPQ9Y5P4 624 aa16.33■□□□□ 0.2
SF3B5-201ENST00000367569 CLIC4Q9Y696 253 aa16.33■□□□□ 0.2
SF3B5-201ENST00000367569 ADGRA3Q8IWK6 1321 aa16.33■□□□□ 0.2
SF3B5-201ENST00000367569 DENND3A2RUS2 1198 aa16.32■□□□□ 0.2
SF3B5-201ENST00000367569 C5orf67F2Z3F1 127 aa16.32■□□□□ 0.2
SF3B5-201ENST00000367569 H3BQ06 376 aaPredicted RBP16.32■□□□□ 0.2
SF3B5-201ENST00000367569 GRM6O15303 877 aa16.32■□□□□ 0.2
SF3B5-201ENST00000367569 STX6O43752 255 aa16.32■□□□□ 0.2
SF3B5-201ENST00000367569 DGKIO75912 1065 aa16.32■□□□□ 0.2
SF3B5-201ENST00000367569 LYPLA2O95372 231 aa16.32■□□□□ 0.2
SF3B5-201ENST00000367569 RB1P06400 928 aa16.32■□□□□ 0.2
SF3B5-201ENST00000367569 SRGAP2CP0DJJ0 459 aa16.32■□□□□ 0.2
SF3B5-201ENST00000367569 IL9P15248 144 aa16.32■□□□□ 0.2
SF3B5-201ENST00000367569 RFC5P40937 340 aa16.32■□□□□ 0.2
SF3B5-201ENST00000367569 DNM2P50570 870 aa16.32■□□□□ 0.2
SF3B5-201ENST00000367569 BTG3Q14201 252 aaPredicted RBP16.32■□□□□ 0.2
SF3B5-201ENST00000367569 SF3A1Q15459 793 aaKnown RBP16.32■□□□□ 0.2
SF3B5-201ENST00000367569 HAUS3Q68CZ6 603 aa16.32■□□□□ 0.2
SF3B5-201ENST00000367569 DTHD1Q6ZMT9 781 aa16.32■□□□□ 0.2
SF3B5-201ENST00000367569 FAM178BQ8IXR5 827 aa16.32■□□□□ 0.2
SF3B5-201ENST00000367569 CRIPAKQ8N1N5 446 aa16.32■□□□□ 0.2
SF3B5-201ENST00000367569 IGSF22Q8N9C0 903 aa16.32■□□□□ 0.2
SF3B5-201ENST00000367569 ASAP3Q8TDY4 903 aa16.32■□□□□ 0.2
SF3B5-201ENST00000367569 PRPF31Q8WWY3 499 aaKnown RBP16.32■□□□□ 0.2
SF3B5-201ENST00000367569 ADAM2Q99965 735 aa16.32■□□□□ 0.2
SF3B5-201ENST00000367569 POLR3CQ9BUI4 534 aaPredicted RBP16.32■□□□□ 0.2
SF3B5-201ENST00000367569 POLR3FQ9H1D9 316 aaPredicted RBP16.32■□□□□ 0.2
SF3B5-201ENST00000367569 NSUN3Q9H649 340 aaKnown RBP16.32■□□□□ 0.2
SF3B5-201ENST00000367569 ATP6V0A4Q9HBG4 840 aa16.32■□□□□ 0.2
SF3B5-201ENST00000367569 DDX19AQ9NUU7 478 aaKnown RBP16.32■□□□□ 0.2
SF3B5-201ENST00000367569 KIAA1024Q9UPX6 916 aa16.32■□□□□ 0.2
SF3B5-201ENST00000367569 SQORQ9Y6N5 450 aa16.32■□□□□ 0.2
SF3B5-201ENST00000367569 MYH11P35749 1972 aa16.31■□□□□ 0.2
SF3B5-201ENST00000367569 E9PMD0 336 aa16.31■□□□□ 0.2
SF3B5-201ENST00000367569 CSPG5O95196 566 aa16.31■□□□□ 0.2
SF3B5-201ENST00000367569 DARSP14868 501 aaKnown RBP16.31■□□□□ 0.2
SF3B5-201ENST00000367569 LAMTOR4Q0VGL1 99 aa16.31■□□□□ 0.2
SF3B5-201ENST00000367569 PKP1Q13835 747 aa16.31■□□□□ 0.2
SF3B5-201ENST00000367569 PTCRAQ6ISU1 281 aaPredicted RBP16.31■□□□□ 0.2
SF3B5-201ENST00000367569 KCNK18Q7Z418 384 aa16.31■□□□□ 0.2
SF3B5-201ENST00000367569 RNF169Q8NCN4 708 aa16.31■□□□□ 0.2
SF3B5-201ENST00000367569 PSPC1Q8WXF1 523 aaKnown RBP16.31■□□□□ 0.2
SF3B5-201ENST00000367569 CLP1Q92989 425 aaKnown RBP16.31■□□□□ 0.2
SF3B5-201ENST00000367569 PABPC5Q96DU9 382 aaKnown RBP16.31■□□□□ 0.2
SF3B5-201ENST00000367569 MMTAG2Q9BU76 263 aaKnown RBP16.31■□□□□ 0.2
SF3B5-201ENST00000367569 FTHL17Q9BXU8 183 aa16.31■□□□□ 0.2
SF3B5-201ENST00000367569 MINDY3Q9H8M7 445 aa16.31■□□□□ 0.2
SF3B5-201ENST00000367569 ANKEF1Q9NU02 776 aa16.31■□□□□ 0.2
SF3B5-201ENST00000367569 HCSTQ9UBK5 93 aa16.31■□□□□ 0.2
SF3B5-201ENST00000367569 RWDD3Q9Y3V2 267 aa16.31■□□□□ 0.2
SF3B5-201ENST00000367569 ARHGEF35A5YM69 484 aa16.3■□□□□ 0.2
SF3B5-201ENST00000367569 GRXCR2A6NFK2 248 aa16.3■□□□□ 0.2
SF3B5-201ENST00000367569 LAD1O00515 517 aa16.3■□□□□ 0.2
SF3B5-201ENST00000367569 EIF4BP23588 611 aaKnown RBP16.3■□□□□ 0.2
SF3B5-201ENST00000367569 RPA1P27694 616 aa16.3■□□□□ 0.2
SF3B5-201ENST00000367569 PRPHP41219 470 aa16.3■□□□□ 0.2
SF3B5-201ENST00000367569 CAPSQ13938 189 aa16.3■□□□□ 0.2
SF3B5-201ENST00000367569 COL19A1Q14993 1142 aa16.3■□□□□ 0.2
SF3B5-201ENST00000367569 LONRF3Q496Y0 759 aa16.3■□□□□ 0.2
SF3B5-201ENST00000367569 LRFN3Q9BTN0 628 aa16.3■□□□□ 0.2
SF3B5-201ENST00000367569 C11orf84Q9BUA3 381 aaPredicted RBP16.3■□□□□ 0.2
SF3B5-201ENST00000367569 BHMT2Q9H2M3 363 aa16.3■□□□□ 0.2
SF3B5-201ENST00000367569 PLXNA4Q9HCM2 1894 aa16.29■□□□□ 0.2
SF3B5-201ENST00000367569 GPR182O15218 404 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 71.3 ms