RNA–Protein interactions for RNA: ENST00000367196.3

CTSD-202, Transcript of cathepsin D, humanhuman

TSL 5

Gene CTSD, Length 907 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-202ENST00000367196 DDX11L8A8MPP1 907 aa16.63■□□□□ 0.25
CTSD-202ENST00000367196 SLC37A4O43826 429 aa16.63■□□□□ 0.25
CTSD-202ENST00000367196 CCNT1O60563 726 aaKnown RBP16.63■□□□□ 0.25
CTSD-202ENST00000367196 MAFO75444 373 aaPredicted RBP16.63■□□□□ 0.25
CTSD-202ENST00000367196 P4HBP07237 508 aaKnown RBP16.63■□□□□ 0.25
CTSD-202ENST00000367196 RAB27AP51159 221 aa16.63■□□□□ 0.25
CTSD-202ENST00000367196 KCNT2Q6UVM3 1135 aa16.63■□□□□ 0.25
CTSD-202ENST00000367196 RHPN2Q8IUC4 686 aa16.63■□□□□ 0.25
CTSD-202ENST00000367196 SLFN12Q8IYM2 578 aa16.63■□□□□ 0.25
CTSD-202ENST00000367196 RNF169Q8NCN4 708 aa16.63■□□□□ 0.25
CTSD-202ENST00000367196 ZNF668Q96K58 619 aaPredicted RBP16.63■□□□□ 0.25
CTSD-202ENST00000367196 MSLNLQ96KJ4 702 aa16.63■□□□□ 0.25
CTSD-202ENST00000367196 TRAIPQ9BWF2 469 aa16.63■□□□□ 0.25
CTSD-202ENST00000367196 ENTPD7Q9NQZ7 604 aa16.63■□□□□ 0.25
CTSD-202ENST00000367196 CYP26B1Q9NR63 512 aa16.63■□□□□ 0.25
CTSD-202ENST00000367196 RAPGEFL1Q9UHV5 662 aa16.63■□□□□ 0.25
CTSD-202ENST00000367196 FSCN2O14926 492 aa16.62■□□□□ 0.25
CTSD-202ENST00000367196 GAS2O43903 313 aaKnown RBP16.62■□□□□ 0.25
CTSD-202ENST00000367196 BAG4O95429 457 aaKnown RBP16.62■□□□□ 0.25
CTSD-202ENST00000367196 POLGP54098 1239 aaPredicted RBP16.62■□□□□ 0.25
CTSD-202ENST00000367196 ERICH6BQ5W0A0 696 aa16.62■□□□□ 0.25
CTSD-202ENST00000367196 TWF2Q6IBS0 349 aaKnown RBP16.62■□□□□ 0.25
CTSD-202ENST00000367196 PIK3AP1Q6ZUJ8 805 aa16.62■□□□□ 0.25
CTSD-202ENST00000367196 CEP89Q96ST8 783 aa16.62■□□□□ 0.25
CTSD-202ENST00000367196 TCF25Q9BQ70 676 aa16.62■□□□□ 0.25
CTSD-202ENST00000367196 C11orf16Q9NQ32 467 aa16.62■□□□□ 0.25
CTSD-202ENST00000367196 PPP4R2Q9NY27 417 aa16.62■□□□□ 0.25
CTSD-202ENST00000367196 SPG21Q9NZD8 308 aa16.62■□□□□ 0.25
CTSD-202ENST00000367196 CLEC1BQ9P126 229 aa16.62■□□□□ 0.25
CTSD-202ENST00000367196 SUCLA2Q9P2R7 463 aaPredicted RBP16.62■□□□□ 0.25
CTSD-202ENST00000367196 ORC3Q9UBD5 711 aaPredicted RBP16.62■□□□□ 0.25
CTSD-202ENST00000367196 VAV3Q9UKW4 847 aa16.62■□□□□ 0.25
CTSD-202ENST00000367196 TPCN1Q9ULQ1 816 aa16.62■□□□□ 0.25
CTSD-202ENST00000367196 A0A087WZ62 844 aa16.61■□□□□ 0.25
CTSD-202ENST00000367196 STBD1O95210 358 aa16.61■□□□□ 0.25
CTSD-202ENST00000367196 KRT2P35908 639 aa16.61■□□□□ 0.25
CTSD-202ENST00000367196 RFC5P40937 340 aa16.61■□□□□ 0.25
CTSD-202ENST00000367196 ALDH7A1P49419 539 aaKnown RBP16.61■□□□□ 0.25
CTSD-202ENST00000367196 DRP2Q13474 957 aa16.61■□□□□ 0.25
CTSD-202ENST00000367196 DUSP6Q16828 381 aa16.61■□□□□ 0.25
CTSD-202ENST00000367196 ANO5Q75V66 913 aa16.61■□□□□ 0.25
CTSD-202ENST00000367196 OTUD6AQ7L8S5 288 aa16.61■□□□□ 0.25
CTSD-202ENST00000367196 NLRP4Q96MN2 994 aa16.61■□□□□ 0.25
CTSD-202ENST00000367196 FDXACB1Q9BRP7 624 aaPredicted RBP16.61■□□□□ 0.25
CTSD-202ENST00000367196 HCSTQ9UBK5 93 aa16.61■□□□□ 0.25
CTSD-202ENST00000367196 BARX2Q9UMQ3 279 aaPredicted RBP16.61■□□□□ 0.25
CTSD-202ENST00000367196 PIN4Q9Y237 131 aaKnown RBP16.61■□□□□ 0.25
CTSD-202ENST00000367196 GLP2RO95838 553 aa16.6■□□□□ 0.25
CTSD-202ENST00000367196 FGFR4P22455 802 aa16.6■□□□□ 0.25
CTSD-202ENST00000367196 PHKA2P46019 1235 aa16.6■□□□□ 0.25
CTSD-202ENST00000367196 EPHA7Q15375 998 aa16.6■□□□□ 0.25
CTSD-202ENST00000367196 CLLU1OSQ5K130 101 aa16.6■□□□□ 0.25
CTSD-202ENST00000367196 PLPP4Q5VZY2 271 aa16.6■□□□□ 0.25
CTSD-202ENST00000367196 CATSPER4Q7RTX7 472 aa16.6■□□□□ 0.25
CTSD-202ENST00000367196 ZNF598Q86UK7 904 aaKnown RBP16.6■□□□□ 0.25
CTSD-202ENST00000367196 C4orf19Q8IY42 314 aa16.6■□□□□ 0.25
CTSD-202ENST00000367196 TCP11Q8WWU5 503 aa16.6■□□□□ 0.25
CTSD-202ENST00000367196 PSPC1Q8WXF1 523 aaKnown RBP16.6■□□□□ 0.25
CTSD-202ENST00000367196 CEP170P1Q96L14 293 aa16.6■□□□□ 0.25
CTSD-202ENST00000367196 LXNQ9BS40 222 aa16.6■□□□□ 0.25
CTSD-202ENST00000367196 RNF19AQ9NV58 838 aa16.6■□□□□ 0.25
CTSD-202ENST00000367196 COL4A3BPQ9Y5P4 624 aa16.6■□□□□ 0.25
CTSD-202ENST00000367196 TMEM150BA6NC51 233 aa16.59■□□□□ 0.25
CTSD-202ENST00000367196 EML1O00423 815 aa16.59■□□□□ 0.25
CTSD-202ENST00000367196 PER2O15055 1255 aa16.59■□□□□ 0.25
CTSD-202ENST00000367196 ATF7P17544 494 aaPredicted RBP16.59■□□□□ 0.25
CTSD-202ENST00000367196 AK2P54819 239 aa16.59■□□□□ 0.25
CTSD-202ENST00000367196 ERVFC1P60507 584 aa16.59■□□□□ 0.25
CTSD-202ENST00000367196 TRIM29Q14134 588 aa16.59■□□□□ 0.25
CTSD-202ENST00000367196 SMC1AQ14683 1233 aaKnown RBP16.59■□□□□ 0.25
CTSD-202ENST00000367196 PLA2G4FQ68DD2 849 aa16.59■□□□□ 0.25
CTSD-202ENST00000367196 GLB1LQ6UWU2 654 aa16.59■□□□□ 0.25
CTSD-202ENST00000367196 LRRC55Q6ZSA7 311 aa16.59■□□□□ 0.25
CTSD-202ENST00000367196 TMC7Q7Z402 723 aa16.59■□□□□ 0.25
CTSD-202ENST00000367196 HELQQ8TDG4 1101 aa16.59■□□□□ 0.25
CTSD-202ENST00000367196 PGBD4Q96DM1 585 aa16.59■□□□□ 0.25
CTSD-202ENST00000367196 TMEM169Q96HH4 297 aa16.59■□□□□ 0.25
CTSD-202ENST00000367196 SH2D3AQ9BRG2 576 aa16.59■□□□□ 0.25
CTSD-202ENST00000367196 STK39Q9UEW8 545 aa16.59■□□□□ 0.25
CTSD-202ENST00000367196 USP15Q9Y4E8 981 aaPredicted RBP16.59■□□□□ 0.25
CTSD-202ENST00000367196 PCDHGC5Q9Y5F6 944 aa16.59■□□□□ 0.25
CTSD-202ENST00000367196 ASAP2O43150 1006 aa16.58■□□□□ 0.24
CTSD-202ENST00000367196 HOXB8P17481 243 aaPredicted RBP16.58■□□□□ 0.24
CTSD-202ENST00000367196 YWHABP31946 246 aaKnown RBP16.58■□□□□ 0.24
CTSD-202ENST00000367196 HERC4Q5GLZ8 1057 aaPredicted RBP16.58■□□□□ 0.24
CTSD-202ENST00000367196 NCAPH2Q6IBW4 605 aa16.58■□□□□ 0.24
CTSD-202ENST00000367196 TMEM184AQ6ZMB5 413 aa16.58■□□□□ 0.24
CTSD-202ENST00000367196 SRGAP1Q7Z6B7 1085 aa16.58■□□□□ 0.24
CTSD-202ENST00000367196 POTEDQ86YR6 584 aa16.58■□□□□ 0.24
CTSD-202ENST00000367196 RNF135Q8IUD6 432 aa16.58■□□□□ 0.24
CTSD-202ENST00000367196 SLC39A11Q8N1S5 342 aa16.58■□□□□ 0.24
CTSD-202ENST00000367196 CASP10Q92851 521 aa16.58■□□□□ 0.24
CTSD-202ENST00000367196 GTF3C6Q969F1 213 aa16.58■□□□□ 0.24
CTSD-202ENST00000367196 PHF7Q9BWX1 381 aaPredicted RBP16.58■□□□□ 0.24
CTSD-202ENST00000367196 DHX33Q9H6R0 707 aaKnown RBP16.58■□□□□ 0.24
CTSD-202ENST00000367196 ZSWIM4Q9H7M6 989 aa16.58■□□□□ 0.24
CTSD-202ENST00000367196 FAM105AQ9NUU6 356 aa16.58■□□□□ 0.24
CTSD-202ENST00000367196 ZNF623O75123 536 aa16.57■□□□□ 0.24
CTSD-202ENST00000367196 CSDE1O75534 798 aaKnown RBP16.57■□□□□ 0.24
CTSD-202ENST00000367196 RNASELQ05823 741 aaKnown RBP16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms