RNA–Protein interactions for RNA: ENST00000366997.8

LPGAT1-202, Transcript of lysophosphatidylglycerol acyltransferase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LPGAT1, Length 7,782 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPGAT1-202ENST00000366997 RBM12Q9NTZ6 932 aaKnown RBP12.59□□□□□ -0.39
LPGAT1-202ENST00000366997 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.59□□□□□ -0.39
LPGAT1-202ENST00000366997 STAT3P40763 770 aa12.59□□□□□ -0.39
LPGAT1-202ENST00000366997 IRAK1P51617 712 aa12.59□□□□□ -0.39
LPGAT1-202ENST00000366997 KCNQ4P56696 695 aa12.59□□□□□ -0.39
LPGAT1-202ENST00000366997 MUM1L1Q5H9M0 696 aa12.59□□□□□ -0.39
LPGAT1-202ENST00000366997 PDXDC1Q6P996 788 aa12.59□□□□□ -0.39
LPGAT1-202ENST00000366997 TTC25Q96NG3 672 aa12.59□□□□□ -0.39
LPGAT1-202ENST00000366997 UPF3AQ9H1J1 476 aaKnown RBP12.59□□□□□ -0.39
LPGAT1-202ENST00000366997 PSD3Q9NYI0 1048 aa12.59□□□□□ -0.39
LPGAT1-202ENST00000366997 PPME1Q9Y570 386 aa12.59□□□□□ -0.39
LPGAT1-202ENST00000366997 KRT37O76014 449 aa12.59□□□□□ -0.39
LPGAT1-202ENST00000366997 FOXD4Q12950 439 aaPredicted RBP12.59□□□□□ -0.39
LPGAT1-202ENST00000366997 MKRN4PQ13434 485 aaPredicted RBP12.59□□□□□ -0.39
LPGAT1-202ENST00000366997 ZIM3Q96PE6 472 aa12.59□□□□□ -0.39
LPGAT1-202ENST00000366997 AS3MTQ9HBK9 375 aa12.59□□□□□ -0.39
LPGAT1-202ENST00000366997 HEY1Q9Y5J3 304 aa12.59□□□□□ -0.39
LPGAT1-202ENST00000366997 NLRP1Q9C000 1473 aa12.59□□□□□ -0.39
LPGAT1-202ENST00000366997 ARFIP2P53365 341 aa12.59□□□□□ -0.39
LPGAT1-202ENST00000366997 HACE1Q8IYU2 909 aa12.59□□□□□ -0.39
LPGAT1-202ENST00000366997 FAM187AA6NFU0 413 aa12.58□□□□□ -0.39
LPGAT1-202ENST00000366997 NR1H3Q13133 447 aa12.58□□□□□ -0.39
LPGAT1-202ENST00000366997 SMAD1Q15797 465 aaKnown RBP12.58□□□□□ -0.39
LPGAT1-202ENST00000366997 SLC26A7Q8TE54 656 aa12.58□□□□□ -0.39
LPGAT1-202ENST00000366997 RNPC3Q96LT9 517 aaKnown RBP12.58□□□□□ -0.39
LPGAT1-202ENST00000366997 ADAM33Q9BZ11 813 aa12.58□□□□□ -0.39
LPGAT1-202ENST00000366997 ADD3Q9UEY8 706 aaKnown RBP12.58□□□□□ -0.39
LPGAT1-202ENST00000366997 HNRNPH1P31943 449 aaKnown RBP12.58□□□□□ -0.4
LPGAT1-202ENST00000366997 CORO7P57737 925 aa12.58□□□□□ -0.4
LPGAT1-202ENST00000366997 KRT17Q04695 432 aa12.58□□□□□ -0.4
LPGAT1-202ENST00000366997 SUSD4Q5VX71 490 aa12.58□□□□□ -0.4
LPGAT1-202ENST00000366997 PPP1R2P3Q6NXS1 205 aa12.58□□□□□ -0.4
LPGAT1-202ENST00000366997 GADL1Q6ZQY3 521 aa12.58□□□□□ -0.4
LPGAT1-202ENST00000366997 PPP1R16BQ96T49 567 aa12.58□□□□□ -0.4
LPGAT1-202ENST00000366997 BRIP1Q9BX63 1249 aa12.58□□□□□ -0.4
LPGAT1-202ENST00000366997 WNT8AQ9H1J5 351 aa12.58□□□□□ -0.4
LPGAT1-202ENST00000366997 CD248Q9HCU0 757 aa12.58□□□□□ -0.4
LPGAT1-202ENST00000366997 NDE1Q9NXR1 346 aa12.58□□□□□ -0.4
LPGAT1-202ENST00000366997 PCDHA6Q9UN73 950 aa12.58□□□□□ -0.4
LPGAT1-202ENST00000366997 PCDHA8Q9Y5H6 950 aa12.58□□□□□ -0.4
LPGAT1-202ENST00000366997 NPHP3-ACAD11A0A0J9YXS1 232 aa12.58□□□□□ -0.4
LPGAT1-202ENST00000366997 DNAJC6O75061 913 aa12.58□□□□□ -0.4
LPGAT1-202ENST00000366997 DEUP1Q05D60 604 aa12.58□□□□□ -0.4
LPGAT1-202ENST00000366997 SPATA21Q7Z572 469 aa12.58□□□□□ -0.4
LPGAT1-202ENST00000366997 ZBED8Q8IZ13 594 aa12.58□□□□□ -0.4
LPGAT1-202ENST00000366997 TRIM51Q9BSJ1 452 aa12.58□□□□□ -0.4
LPGAT1-202ENST00000366997 ANGPTL3Q9Y5C1 460 aa12.58□□□□□ -0.4
LPGAT1-202ENST00000366997 ARHGEF40Q8TER5 1519 aa12.58□□□□□ -0.4
LPGAT1-202ENST00000366997 ZNF233A6NK53 670 aa12.58□□□□□ -0.4
LPGAT1-202ENST00000366997 S100BP04271 92 aaPredicted RBP12.58□□□□□ -0.4
LPGAT1-202ENST00000366997 GYPCP04921 128 aa12.58□□□□□ -0.4
LPGAT1-202ENST00000366997 ELF1P32519 619 aa12.58□□□□□ -0.4
LPGAT1-202ENST00000366997 TRIM59Q8IWR1 403 aa12.58□□□□□ -0.4
LPGAT1-202ENST00000366997 EXT2Q93063 718 aa12.58□□□□□ -0.4
LPGAT1-202ENST00000366997 SH3GL3Q99963 347 aa12.58□□□□□ -0.4
LPGAT1-202ENST00000366997 CACYBPQ9HB71 228 aaKnown RBP12.58□□□□□ -0.4
LPGAT1-202ENST00000366997 PNMA2Q9UL42 364 aa12.58□□□□□ -0.4
LPGAT1-202ENST00000366997 USP17L15C9J2P7 530 aa12.58□□□□□ -0.4
LPGAT1-202ENST00000366997 USP17L13C9JLJ4 530 aa12.58□□□□□ -0.4
LPGAT1-202ENST00000366997 USP17L11C9JVI0 530 aa12.58□□□□□ -0.4
LPGAT1-202ENST00000366997 USP17L18D6R9N7 530 aa12.58□□□□□ -0.4
LPGAT1-202ENST00000366997 USP17L22D6RA61 530 aa12.58□□□□□ -0.4
LPGAT1-202ENST00000366997 USP17L17D6RBQ6 530 aa12.58□□□□□ -0.4
LPGAT1-202ENST00000366997 USP17L19D6RCP7 530 aa12.58□□□□□ -0.4
LPGAT1-202ENST00000366997 USP17L20D6RJB6 530 aa12.58□□□□□ -0.4
LPGAT1-202ENST00000366997 GOLGA8RI6L899 631 aa12.58□□□□□ -0.4
LPGAT1-202ENST00000366997 SRGAP2CP0DJJ0 459 aa12.58□□□□□ -0.4
LPGAT1-202ENST00000366997 USP17L24Q0WX57 530 aa12.58□□□□□ -0.4
LPGAT1-202ENST00000366997 DPYDQ12882 1025 aa12.58□□□□□ -0.4
LPGAT1-202ENST00000366997 PDIA2Q13087 525 aaKnown RBP12.58□□□□□ -0.4
LPGAT1-202ENST00000366997 USP17L6PQ6QN14 398 aa12.58□□□□□ -0.4
LPGAT1-202ENST00000366997 TRIM67Q6ZTA4 783 aa12.58□□□□□ -0.4
LPGAT1-202ENST00000366997 TARBP1Q13395 1621 aaKnown RBP12.58□□□□□ -0.4
LPGAT1-202ENST00000366997 RFX7Q2KHR2 1363 aa12.58□□□□□ -0.4
LPGAT1-202ENST00000366997 SEC24CP53992 1094 aa12.58□□□□□ -0.4
LPGAT1-202ENST00000366997 LONRF1Q17RB8 773 aa12.58□□□□□ -0.4
LPGAT1-202ENST00000366997 SLC44A5Q8NCS7 719 aa12.58□□□□□ -0.4
LPGAT1-202ENST00000366997 NCAPGQ9BPX3 1015 aa12.58□□□□□ -0.4
LPGAT1-202ENST00000366997 TMEM47Q9BQJ4 181 aa12.58□□□□□ -0.4
LPGAT1-202ENST00000366997 ITIH6Q6UXX5 1313 aa12.58□□□□□ -0.4
LPGAT1-202ENST00000366997 PFDN6O15212 129 aa12.57□□□□□ -0.4
LPGAT1-202ENST00000366997 CCND2P30279 289 aa12.57□□□□□ -0.4
LPGAT1-202ENST00000366997 HABP4Q5JVS0 413 aaKnown RBP12.57□□□□□ -0.4
LPGAT1-202ENST00000366997 GLYCTKQ8IVS8 523 aa12.57□□□□□ -0.4
LPGAT1-202ENST00000366997 KLC2Q9H0B6 622 aa12.57□□□□□ -0.4
LPGAT1-202ENST00000366997 FAM205CA6NFA0 338 aa12.57□□□□□ -0.4
LPGAT1-202ENST00000366997 PPEF1O14829 653 aaPredicted RBP12.57□□□□□ -0.4
LPGAT1-202ENST00000366997 DYNC1I2Q13409 638 aaKnown RBP12.57□□□□□ -0.4
LPGAT1-202ENST00000366997 SCARF1Q14162 830 aa12.57□□□□□ -0.4
LPGAT1-202ENST00000366997 PPM1NQ8N819 430 aa12.57□□□□□ -0.4
LPGAT1-202ENST00000366997 ARL8AQ96BM9 186 aa12.57□□□□□ -0.4
LPGAT1-202ENST00000366997 NPHS2Q9NP85 383 aa12.57□□□□□ -0.4
LPGAT1-202ENST00000366997 STXBP3O00186 592 aa12.57□□□□□ -0.4
LPGAT1-202ENST00000366997 RBM41Q96IZ5 413 aaKnown RBP12.57□□□□□ -0.4
LPGAT1-202ENST00000366997 PNKPQ96T60 521 aa12.57□□□□□ -0.4
LPGAT1-202ENST00000366997 SNX25Q9H3E2 840 aa12.57□□□□□ -0.4
LPGAT1-202ENST00000366997 FNDC3AQ9Y2H6 1198 aaKnown RBP12.57□□□□□ -0.4
LPGAT1-202ENST00000366997 PVALEFA0A1B0GWK0 134 aa12.57□□□□□ -0.4
LPGAT1-202ENST00000366997 VAMP7P51809 220 aa12.57□□□□□ -0.4
LPGAT1-202ENST00000366997 DHX34Q14147 1143 aaKnown RBP12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms