RNA–Protein interactions for RNA: ENST00000362093.4

CKLF-204, Transcript of chemokine like factor, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CKLF, Length 412 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKLF-204ENST00000362093 DDX19AQ9NUU7 478 aaKnown RBP18.81■□□□□ 0.6
CKLF-204ENST00000362093 CLIC4Q9Y696 253 aa18.81■□□□□ 0.6
CKLF-204ENST00000362093 ARID2Q68CP9 1835 aa18.8■□□□□ 0.6
CKLF-204ENST00000362093 USO1O60763 962 aaKnown RBP18.8■□□□□ 0.6
CKLF-204ENST00000362093 CYP11B2P19099 503 aa18.8■□□□□ 0.6
CKLF-204ENST00000362093 SFPQP23246 707 aaKnown RBP eCLIP18.8■□□□□ 0.6
CKLF-204ENST00000362093 GLRA2P23416 452 aa18.8■□□□□ 0.6
CKLF-204ENST00000362093 PTPAQ15257 358 aa18.8■□□□□ 0.6
CKLF-204ENST00000362093 HYIQ5T013 277 aa18.8■□□□□ 0.6
CKLF-204ENST00000362093 FAM173BQ6P4H8 233 aa18.8■□□□□ 0.6
CKLF-204ENST00000362093 IFNLR1Q8IU57 520 aaPredicted RBP18.8■□□□□ 0.6
CKLF-204ENST00000362093 ASAP3Q8TDY4 903 aa18.8■□□□□ 0.6
CKLF-204ENST00000362093 GAS2L1Q99501 681 aaPredicted RBP18.8■□□□□ 0.6
CKLF-204ENST00000362093 MINDY3Q9H8M7 445 aa18.8■□□□□ 0.6
CKLF-204ENST00000362093 RNF216Q9NWF9 866 aaPredicted RBP18.8■□□□□ 0.6
CKLF-204ENST00000362093 LRFN2Q9ULH4 789 aa18.8■□□□□ 0.6
CKLF-204ENST00000362093 CDH23Q9H251 3354 aa18.8■□□□□ 0.6
CKLF-204ENST00000362093 ARHGEF35A5YM69 484 aa18.79■□□□□ 0.6
CKLF-204ENST00000362093 LINC00271P0C7V0 271 aa18.79■□□□□ 0.6
CKLF-204ENST00000362093 PDIA4P13667 645 aaKnown RBP18.79■□□□□ 0.6
CKLF-204ENST00000362093 POU3F3P20264 500 aaPredicted RBP18.79■□□□□ 0.6
CKLF-204ENST00000362093 PTENP60484 403 aa18.79■□□□□ 0.6
CKLF-204ENST00000362093 MCPH1Q8NEM0 835 aa18.79■□□□□ 0.6
CKLF-204ENST00000362093 AK8Q96MA6 479 aa18.79■□□□□ 0.6
CKLF-204ENST00000362093 C17orf80Q9BSJ5 609 aa18.79■□□□□ 0.6
CKLF-204ENST00000362093 TRAIPQ9BWF2 469 aa18.79■□□□□ 0.6
CKLF-204ENST00000362093 BHMT2Q9H2M3 363 aa18.79■□□□□ 0.6
CKLF-204ENST00000362093 GPRC5CQ9NQ84 441 aa18.79■□□□□ 0.6
CKLF-204ENST00000362093 TMEM161AQ9NX61 479 aa18.79■□□□□ 0.6
CKLF-204ENST00000362093 DNM3Q9UQ16 869 aa18.79■□□□□ 0.6
CKLF-204ENST00000362093 COL4A6Q14031 1691 aa18.79■□□□□ 0.6
CKLF-204ENST00000362093 MYO9BQ13459 2157 aa18.78■□□□□ 0.6
CKLF-204ENST00000362093 A0A0U1RQF3 1178 aa18.78■□□□□ 0.6
CKLF-204ENST00000362093 LPXNO60711 386 aa18.78■□□□□ 0.6
CKLF-204ENST00000362093 EYA4O95677 639 aa18.78■□□□□ 0.6
CKLF-204ENST00000362093 HSP90AA1P07900 732 aaKnown RBP18.78■□□□□ 0.6
CKLF-204ENST00000362093 GRIN1Q05586 938 aa18.78■□□□□ 0.6
CKLF-204ENST00000362093 CAPSQ13938 189 aa18.78■□□□□ 0.6
CKLF-204ENST00000362093 TFDP1Q14186 410 aa18.78■□□□□ 0.6
CKLF-204ENST00000362093 MAEAQ7L5Y9 396 aa18.78■□□□□ 0.6
CKLF-204ENST00000362093 CATSPER4Q7RTX7 472 aa18.78■□□□□ 0.6
CKLF-204ENST00000362093 KCNK18Q7Z418 384 aa18.78■□□□□ 0.6
CKLF-204ENST00000362093 ECHDC2Q86YB7 292 aa18.78■□□□□ 0.6
CKLF-204ENST00000362093 CMTR2Q8IYT2 770 aaKnown RBP18.78■□□□□ 0.6
CKLF-204ENST00000362093 FIBCD1Q8N539 461 aa18.78■□□□□ 0.6
CKLF-204ENST00000362093 KCTD17Q8N5Z5 321 aa18.78■□□□□ 0.6
CKLF-204ENST00000362093 SAMD11Q96NU1 681 aa18.78■□□□□ 0.6
CKLF-204ENST00000362093 PNMA5Q96PV4 448 aa18.78■□□□□ 0.6
CKLF-204ENST00000362093 NFKBIZQ9BYH8 718 aa18.78■□□□□ 0.6
CKLF-204ENST00000362093 POLR3FQ9H1D9 316 aaPredicted RBP18.78■□□□□ 0.6
CKLF-204ENST00000362093 DACT1Q9NYF0 836 aa18.78■□□□□ 0.6
CKLF-204ENST00000362093 CHD9Q3L8U1 2897 aa18.78■□□□□ 0.6
CKLF-204ENST00000362093 ADGRA3Q8IWK6 1321 aa18.77■□□□□ 0.6
CKLF-204ENST00000362093 A0A0C4DFX4 3053 aa18.77■□□□□ 0.6
CKLF-204ENST00000362093 E9PMD0 336 aa18.77■□□□□ 0.6
CKLF-204ENST00000362093 HOXA11P31270 313 aaPredicted RBP18.77■□□□□ 0.6
CKLF-204ENST00000362093 PHKA2P46019 1235 aa18.77■□□□□ 0.6
CKLF-204ENST00000362093 GATMP50440 423 aa18.77■□□□□ 0.6
CKLF-204ENST00000362093 BTG3Q14201 252 aaPredicted RBP18.77■□□□□ 0.6
CKLF-204ENST00000362093 EPC2Q52LR7 807 aa18.77■□□□□ 0.6
CKLF-204ENST00000362093 FAM102BQ5T8I3 360 aa18.77■□□□□ 0.6
CKLF-204ENST00000362093 TMEM192Q8IY95 271 aa18.77■□□□□ 0.6
CKLF-204ENST00000362093 CLP1Q92989 425 aaKnown RBP18.77■□□□□ 0.6
CKLF-204ENST00000362093 AGPAT5Q9NUQ2 364 aa18.77■□□□□ 0.6
CKLF-204ENST00000362093 MTUS1Q9ULD2 1270 aa18.77■□□□□ 0.6
CKLF-204ENST00000362093 CHD7Q9P2D1 2997 aa18.77■□□□□ 0.59
CKLF-204ENST00000362093 SLC26A4O43511 780 aa18.76■□□□□ 0.59
CKLF-204ENST00000362093 EOMESO95936 686 aa18.76■□□□□ 0.59
CKLF-204ENST00000362093 IGFBP4P22692 258 aa18.76■□□□□ 0.59
CKLF-204ENST00000362093 LONP1P36776 959 aaKnown RBP18.76■□□□□ 0.59
CKLF-204ENST00000362093 GRB10Q13322 594 aa18.76■□□□□ 0.59
CKLF-204ENST00000362093 PCBP1Q15365 356 aaKnown RBP eCLIP18.76■□□□□ 0.59
CKLF-204ENST00000362093 ZNF598Q86UK7 904 aaKnown RBP18.76■□□□□ 0.59
CKLF-204ENST00000362093 CABP7Q86V35 215 aa18.76■□□□□ 0.59
CKLF-204ENST00000362093 MAFAQ8NHW3 353 aaPredicted RBP18.76■□□□□ 0.59
CKLF-204ENST00000362093 NT5C3AQ9H0P0 336 aa18.76■□□□□ 0.59
CKLF-204ENST00000362093 RNF19AQ9NV58 838 aa18.76■□□□□ 0.59
CKLF-204ENST00000362093 PIN4Q9Y237 131 aaKnown RBP18.76■□□□□ 0.59
CKLF-204ENST00000362093 MORC2Q9Y6X9 1032 aaPredicted RBP18.76■□□□□ 0.59
CKLF-204ENST00000362093 C5orf67F2Z3F1 127 aa18.75■□□□□ 0.59
CKLF-204ENST00000362093 ZNF623O75123 536 aa18.75■□□□□ 0.59
CKLF-204ENST00000362093 ATF7P17544 494 aaPredicted RBP18.75■□□□□ 0.59
CKLF-204ENST00000362093 IBSPP21815 317 aaPredicted RBP18.75■□□□□ 0.59
CKLF-204ENST00000362093 BMPR1AP36894 532 aa18.75■□□□□ 0.59
CKLF-204ENST00000362093 TMEM119Q4V9L6 283 aa18.75■□□□□ 0.59
CKLF-204ENST00000362093 SPRYD3Q8NCJ5 442 aa18.75■□□□□ 0.59
CKLF-204ENST00000362093 SLC17A8Q8NDX2 589 aa18.75■□□□□ 0.59
CKLF-204ENST00000362093 FBXO22Q8NEZ5 403 aa18.75■□□□□ 0.59
CKLF-204ENST00000362093 BSNDQ8WZ55 320 aa18.75■□□□□ 0.59
CKLF-204ENST00000362093 USP28Q96RU2 1077 aa18.75■□□□□ 0.59
CKLF-204ENST00000362093 MTCH2Q9Y6C9 303 aa18.75■□□□□ 0.59
CKLF-204ENST00000362093 MRPL42Q9Y6G3 142 aaKnown RBP18.75■□□□□ 0.59
CKLF-204ENST00000362093 COL6A3P12111 3177 aa18.75■□□□□ 0.59
CKLF-204ENST00000362093 H3BNC9 293 aa18.74■□□□□ 0.59
CKLF-204ENST00000362093 RB1P06400 928 aa18.74■□□□□ 0.59
CKLF-204ENST00000362093 FGFR1P11362 822 aa18.74■□□□□ 0.59
CKLF-204ENST00000362093 MARCKSP29966 332 aaPredicted RBP18.74■□□□□ 0.59
CKLF-204ENST00000362093 MBTD1Q05BQ5 628 aa18.74■□□□□ 0.59
CKLF-204ENST00000362093 ZRSR1Q15695 479 aaKnown RBP18.74■□□□□ 0.59
CKLF-204ENST00000362093 PAN2Q504Q3 1202 aaKnown RBP18.74■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms