RNA–Protein interactions for RNA: ENST00000361198.9

LDB1-201, Transcript of LIM domain binding 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LDB1, Length 2,285 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-201ENST00000361198 CBWD6Q4V339 395 aa24.64■■□□□ 1.53
LDB1-201ENST00000361198 CBWD3Q5JTY5 395 aa24.64■■□□□ 1.53
LDB1-201ENST00000361198 CBWD5Q5RIA9 395 aa24.64■■□□□ 1.53
LDB1-201ENST00000361198 RDH13Q8NBN7 331 aa24.64■■□□□ 1.53
LDB1-201ENST00000361198 AENQ8WTP8 325 aaKnown RBP24.64■■□□□ 1.53
LDB1-201ENST00000361198 CCDC43Q96MW1 224 aaKnown RBP24.64■■□□□ 1.53
LDB1-201ENST00000361198 FAM204AQ9H8W3 233 aa24.64■■□□□ 1.53
LDB1-201ENST00000361198 TISP43B9A030 160 aa24.63■■□□□ 1.53
LDB1-201ENST00000361198 MAPTP10636 758 aaKnown RBP24.63■■□□□ 1.53
LDB1-201ENST00000361198 HIRAP54198 1017 aaPredicted RBP24.63■■□□□ 1.53
LDB1-201ENST00000361198 KRT76Q01546 638 aa24.63■■□□□ 1.53
LDB1-201ENST00000361198 NAB2Q15742 525 aa24.63■■□□□ 1.53
LDB1-201ENST00000361198 KIAA0753Q2KHM9 967 aa24.63■■□□□ 1.53
LDB1-201ENST00000361198 NFRKBQ6P4R8 1299 aa24.63■■□□□ 1.53
LDB1-201ENST00000361198 LEKR1Q6ZMV7 388 aa24.63■■□□□ 1.53
LDB1-201ENST00000361198 ZBTB9Q96C00 473 aa24.63■■□□□ 1.53
LDB1-201ENST00000361198 GPRC5CQ9NQ84 441 aa24.63■■□□□ 1.53
LDB1-201ENST00000361198 TCEAL9Q9UHQ7 104 aa24.63■■□□□ 1.53
LDB1-201ENST00000361198 BZW2Q9Y6E2 419 aaKnown RBP24.63■■□□□ 1.53
LDB1-201ENST00000361198 NCK2O43639 380 aa24.63■■□□□ 1.53
LDB1-201ENST00000361198 CCND2P30279 289 aa24.63■■□□□ 1.53
LDB1-201ENST00000361198 PRKCIP41743 596 aa24.63■■□□□ 1.53
LDB1-201ENST00000361198 OAZ1P54368 228 aa24.63■■□□□ 1.53
LDB1-201ENST00000361198 NPEPPSP55786 919 aa24.63■■□□□ 1.53
LDB1-201ENST00000361198 PSMB7Q99436 277 aa24.63■■□□□ 1.53
LDB1-201ENST00000361198 KIAA1217Q5T5P2 1943 aa24.62■■□□□ 1.53
LDB1-201ENST00000361198 POLR2AP24928 1970 aaKnown RBP24.62■■□□□ 1.53
LDB1-201ENST00000361198 SFNP31947 248 aa24.62■■□□□ 1.53
LDB1-201ENST00000361198 PPP2R5AQ15172 486 aa24.62■■□□□ 1.53
LDB1-201ENST00000361198 PLA2G4FQ68DD2 849 aa24.62■■□□□ 1.53
LDB1-201ENST00000361198 TLR10Q9BXR5 811 aa24.62■■□□□ 1.53
LDB1-201ENST00000361198 TMEM206Q9H813 350 aa24.62■■□□□ 1.53
LDB1-201ENST00000361198 SSC5DA1L4H1 1573 aa24.62■■□□□ 1.53
LDB1-201ENST00000361198 CXCR5P32302 372 aa24.61■■□□□ 1.53
LDB1-201ENST00000361198 BFSP1Q12934 665 aa24.61■■□□□ 1.53
LDB1-201ENST00000361198 XRRA1Q6P2D8 792 aa24.61■■□□□ 1.53
LDB1-201ENST00000361198 CATSPERGQ6ZRH7 1159 aa24.61■■□□□ 1.53
LDB1-201ENST00000361198 PCIF1Q9H4Z3 704 aa24.61■■□□□ 1.53
LDB1-201ENST00000361198 IVLP07476 585 aa24.61■■□□□ 1.53
LDB1-201ENST00000361198 ALCAMQ13740 583 aa24.61■■□□□ 1.53
LDB1-201ENST00000361198 PRKG1Q13976 671 aa24.61■■□□□ 1.53
LDB1-201ENST00000361198 XKR9Q5GH70 373 aa24.61■■□□□ 1.53
LDB1-201ENST00000361198 GPRASP2Q96D09 838 aa24.61■■□□□ 1.53
LDB1-201ENST00000361198 INPP4AQ96PE3 977 aaPredicted RBP24.61■■□□□ 1.53
LDB1-201ENST00000361198 LRRC1Q9BTT6 524 aa24.61■■□□□ 1.53
LDB1-201ENST00000361198 AGPSO00116 658 aa24.6■■□□□ 1.53
LDB1-201ENST00000361198 RGS20O76081 388 aa24.6■■□□□ 1.53
LDB1-201ENST00000361198 MYBPC2Q14324 1141 aa24.6■■□□□ 1.53
LDB1-201ENST00000361198 HAUS6Q7Z4H7 955 aa24.6■■□□□ 1.53
LDB1-201ENST00000361198 NLRX1Q86UT6 975 aa24.6■■□□□ 1.53
LDB1-201ENST00000361198 ACCSQ96QU6 501 aa24.6■■□□□ 1.53
LDB1-201ENST00000361198 WDR81Q562E7 1941 aa24.6■■□□□ 1.53
LDB1-201ENST00000361198 PALMO75781 387 aa24.6■■□□□ 1.53
LDB1-201ENST00000361198 PEX3P56589 373 aa24.6■■□□□ 1.53
LDB1-201ENST00000361198 NSUN6Q8TEA1 469 aaKnown RBP24.6■■□□□ 1.53
LDB1-201ENST00000361198 FBXO41Q8TF61 875 aa24.6■■□□□ 1.53
LDB1-201ENST00000361198 CBWD1Q9BRT8 395 aa24.6■■□□□ 1.53
LDB1-201ENST00000361198 MOV10L1Q9BXT6 1211 aaKnown RBP24.6■■□□□ 1.53
LDB1-201ENST00000361198 DMGDHQ9UI17 866 aaKnown RBP24.6■■□□□ 1.53
LDB1-201ENST00000361198 NAGPAQ9UK23 515 aa24.6■■□□□ 1.53
LDB1-201ENST00000361198 GTF2BQ00403 316 aa24.59■■□□□ 1.53
LDB1-201ENST00000361198 ANO5Q75V66 913 aa24.59■■□□□ 1.53
LDB1-201ENST00000361198 DNAAF5Q86Y56 855 aa24.59■■□□□ 1.53
LDB1-201ENST00000361198 GSPT2Q8IYD1 628 aaKnown RBP24.59■■□□□ 1.53
LDB1-201ENST00000361198 HDAC7Q8WUI4 952 aa24.59■■□□□ 1.53
LDB1-201ENST00000361198 TEX13BQ9BXU2 312 aa24.59■■□□□ 1.53
LDB1-201ENST00000361198 TSKSQ9UJT2 592 aa24.59■■□□□ 1.53
LDB1-201ENST00000361198 AFG3L2Q9Y4W6 797 aa24.59■■□□□ 1.53
LDB1-201ENST00000361198 PCDHA10Q9Y5I2 948 aa24.59■■□□□ 1.53
LDB1-201ENST00000361198 GGCXP38435 758 aa24.59■■□□□ 1.53
LDB1-201ENST00000361198 IRX5P78411 483 aaPredicted RBP24.59■■□□□ 1.53
LDB1-201ENST00000361198 ZNF746Q6NUN9 644 aaPredicted RBP24.59■■□□□ 1.53
LDB1-201ENST00000361198 A1CFQ9NQ94 594 aaKnown RBP24.59■■□□□ 1.53
LDB1-201ENST00000361198 ANKEF1Q9NU02 776 aa24.59■■□□□ 1.53
LDB1-201ENST00000361198 CYP39A1Q9NYL5 469 aa24.59■■□□□ 1.53
LDB1-201ENST00000361198 TMOD4Q9NZQ9 345 aa24.59■■□□□ 1.53
LDB1-201ENST00000361198 ATP2A1O14983 1001 aa24.58■■□□□ 1.53
LDB1-201ENST00000361198 SLC16A4O15374 487 aa24.58■■□□□ 1.53
LDB1-201ENST00000361198 MAFGO15525 162 aa24.58■■□□□ 1.53
LDB1-201ENST00000361198 GFPT2O94808 682 aa24.58■■□□□ 1.53
LDB1-201ENST00000361198 KCNA2P16389 499 aa24.58■■□□□ 1.53
LDB1-201ENST00000361198 DLG4P78352 724 aa24.58■■□□□ 1.53
LDB1-201ENST00000361198 C10orf76Q5T2E6 689 aa24.58■■□□□ 1.53
LDB1-201ENST00000361198 FAM102BQ5T8I3 360 aa24.58■■□□□ 1.53
LDB1-201ENST00000361198 ALKBH5Q6P6C2 394 aaKnown RBP24.58■■□□□ 1.53
LDB1-201ENST00000361198 GPC2Q8N158 579 aa24.58■■□□□ 1.53
LDB1-201ENST00000361198 AFAP1L1Q8TED9 768 aa24.58■■□□□ 1.53
LDB1-201ENST00000361198 GDAP1L1Q96MZ0 367 aa24.58■■□□□ 1.53
LDB1-201ENST00000361198 TIPINQ9BVW5 301 aa24.58■■□□□ 1.53
LDB1-201ENST00000361198 ST6GALNAC4Q9H4F1 302 aa24.58■■□□□ 1.53
LDB1-201ENST00000361198 RNF14Q9UBS8 474 aa24.58■■□□□ 1.53
LDB1-201ENST00000361198 PCDHGC5Q9Y5F6 944 aa24.58■■□□□ 1.53
LDB1-201ENST00000361198 GOLGA6L1Q8N7Z2 621 aa24.58■■□□□ 1.52
LDB1-201ENST00000361198 ZSWIM2Q8NEG5 633 aa24.58■■□□□ 1.52
LDB1-201ENST00000361198 STK33Q9BYT3 514 aa24.58■■□□□ 1.52
LDB1-201ENST00000361198 ACAD9Q9H845 621 aa24.58■■□□□ 1.52
LDB1-201ENST00000361198 DNAJC12Q9UKB3 198 aa24.58■■□□□ 1.52
LDB1-201ENST00000361198 TELO2Q9Y4R8 837 aa24.58■■□□□ 1.52
LDB1-201ENST00000361198 PPP2R3BQ9Y5P8 575 aa24.58■■□□□ 1.52
LDB1-201ENST00000361198 DOCK5Q9H7D0 1870 aa24.57■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms