RNA–Protein interactions for RNA: ENST00000359440.5

TMC3-201, Transcript of transmembrane channel like 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TMC3, Length 4,641 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMC3-201ENST00000359440 POLGP54098 1239 aaPredicted RBP12.11□□□□□ -0.47
TMC3-201ENST00000359440 IRX1P78414 480 aaPredicted RBP12.11□□□□□ -0.47
TMC3-201ENST00000359440 RCSD1Q6JBY9 416 aa12.11□□□□□ -0.47
TMC3-201ENST00000359440 CCDC125Q86Z20 511 aa12.11□□□□□ -0.47
TMC3-201ENST00000359440 SRRM1Q8IYB3 904 aaKnown RBP12.11□□□□□ -0.47
TMC3-201ENST00000359440 RIBC1Q8N443 379 aaPredicted RBP12.11□□□□□ -0.47
TMC3-201ENST00000359440 MS4A14Q96JA4 679 aa12.11□□□□□ -0.47
TMC3-201ENST00000359440 NARFQ9UHQ1 456 aa12.11□□□□□ -0.47
TMC3-201ENST00000359440 C1orf167Q5SNV9 1468 aa12.11□□□□□ -0.47
TMC3-201ENST00000359440 PLS3P13797 630 aa12.1□□□□□ -0.47
TMC3-201ENST00000359440 SCNN1DP51172 638 aa12.1□□□□□ -0.47
TMC3-201ENST00000359440 HERVK_113P62684 666 aa12.1□□□□□ -0.47
TMC3-201ENST00000359440 DYNC1I2Q13409 638 aaKnown RBP12.1□□□□□ -0.47
TMC3-201ENST00000359440 CAPRIN2Q6IMN6 1127 aaKnown RBP12.1□□□□□ -0.47
TMC3-201ENST00000359440 CENPPQ6IPU0 288 aa12.1□□□□□ -0.47
TMC3-201ENST00000359440 RPUSD2Q8IZ73 545 aaKnown RBP12.1□□□□□ -0.47
TMC3-201ENST00000359440 AGPAT1Q99943 283 aa12.1□□□□□ -0.47
TMC3-201ENST00000359440 TIPINQ9BVW5 301 aa12.1□□□□□ -0.47
TMC3-201ENST00000359440 PCIF1Q9H4Z3 704 aa12.1□□□□□ -0.47
TMC3-201ENST00000359440 SAYSD1Q9NPB0 183 aa12.1□□□□□ -0.47
TMC3-201ENST00000359440 HESX1Q9UBX0 185 aa12.1□□□□□ -0.47
TMC3-201ENST00000359440 GYG2O15488 501 aa12.1□□□□□ -0.47
TMC3-201ENST00000359440 RPS6KA4O75676 772 aa12.1□□□□□ -0.47
TMC3-201ENST00000359440 VAMP7P51809 220 aa12.1□□□□□ -0.47
TMC3-201ENST00000359440 GALCP54803 685 aa12.1□□□□□ -0.47
TMC3-201ENST00000359440 SLC12A2P55011 1212 aa12.1□□□□□ -0.47
TMC3-201ENST00000359440 CASP7P55210 303 aa12.1□□□□□ -0.47
TMC3-201ENST00000359440 TRPM8Q7Z2W7 1104 aa12.1□□□□□ -0.47
TMC3-201ENST00000359440 COL23A1Q86Y22 540 aaPredicted RBP12.1□□□□□ -0.47
TMC3-201ENST00000359440 RFX6Q8HWS3 928 aa12.1□□□□□ -0.47
TMC3-201ENST00000359440 TRIM59Q8IWR1 403 aa12.1□□□□□ -0.47
TMC3-201ENST00000359440 NLRP7Q8WX94 980 aa12.1□□□□□ -0.47
TMC3-201ENST00000359440 ZFP69BQ9UJL9 534 aa12.1□□□□□ -0.47
TMC3-201ENST00000359440 TTI1O43156 1089 aa12.1□□□□□ -0.47
TMC3-201ENST00000359440 HAUS5O94927 633 aa12.1□□□□□ -0.47
TMC3-201ENST00000359440 SERPINB6P35237 376 aa12.1□□□□□ -0.47
TMC3-201ENST00000359440 JAK3P52333 1124 aa12.1□□□□□ -0.47
TMC3-201ENST00000359440 RASA3Q14644 834 aa12.1□□□□□ -0.47
TMC3-201ENST00000359440 MEA1Q16626 185 aa12.1□□□□□ -0.47
TMC3-201ENST00000359440 DBN1Q16643 649 aa12.1□□□□□ -0.47
TMC3-201ENST00000359440 FAM98CQ17RN3 349 aaKnown RBP12.1□□□□□ -0.47
TMC3-201ENST00000359440 RNF168Q8IYW5 571 aaPredicted RBP12.1□□□□□ -0.47
TMC3-201ENST00000359440 CEP120Q8N960 986 aa12.1□□□□□ -0.47
TMC3-201ENST00000359440 ACTRT1Q8TDG2 376 aa12.1□□□□□ -0.47
TMC3-201ENST00000359440 CCT6BQ92526 530 aa12.1□□□□□ -0.47
TMC3-201ENST00000359440 SLC40A1Q9NP59 571 aa12.1□□□□□ -0.47
TMC3-201ENST00000359440 TMEM260Q9NX78 707 aa12.1□□□□□ -0.47
TMC3-201ENST00000359440 CHN1P15882 459 aa12.1□□□□□ -0.47
TMC3-201ENST00000359440 KLRC1P26715 233 aa12.1□□□□□ -0.47
TMC3-201ENST00000359440 SKOR1P84550 965 aa12.1□□□□□ -0.47
TMC3-201ENST00000359440 ITIH4Q14624 930 aa12.1□□□□□ -0.47
TMC3-201ENST00000359440 SEC23AQ15436 765 aa12.1□□□□□ -0.47
TMC3-201ENST00000359440 TTBK2Q6IQ55 1244 aa12.1□□□□□ -0.47
TMC3-201ENST00000359440 ZNF449Q6P9G9 518 aa12.1□□□□□ -0.47
TMC3-201ENST00000359440 SEPT14Q6ZU15 432 aa12.1□□□□□ -0.47
TMC3-201ENST00000359440 RHOT1Q8IXI2 618 aa12.1□□□□□ -0.47
TMC3-201ENST00000359440 TEX9Q8N6V9 391 aa12.1□□□□□ -0.47
TMC3-201ENST00000359440 ATL2Q8NHH9 583 aa12.1□□□□□ -0.47
TMC3-201ENST00000359440 NUP85Q9BW27 656 aa12.1□□□□□ -0.47
TMC3-201ENST00000359440 TRAIPQ9BWF2 469 aa12.1□□□□□ -0.47
TMC3-201ENST00000359440 EPS15L1Q9UBC2 864 aa12.1□□□□□ -0.47
TMC3-201ENST00000359440 PPEF1O14829 653 aaPredicted RBP12.09□□□□□ -0.47
TMC3-201ENST00000359440 P4HA2O15460 535 aa12.09□□□□□ -0.47
TMC3-201ENST00000359440 CALB1P05937 261 aa12.09□□□□□ -0.47
TMC3-201ENST00000359440 BTNL9Q6UXG8 535 aa12.09□□□□□ -0.47
TMC3-201ENST00000359440 CYFIP1Q7L576 1253 aa12.09□□□□□ -0.47
TMC3-201ENST00000359440 SH3RF1Q7Z6J0 888 aa12.09□□□□□ -0.47
TMC3-201ENST00000359440 SLC7A3Q8WY07 619 aa12.09□□□□□ -0.47
TMC3-201ENST00000359440 SERPINI1Q99574 410 aa12.09□□□□□ -0.47
TMC3-201ENST00000359440 ADAM22Q9P0K1 906 aa12.09□□□□□ -0.47
TMC3-201ENST00000359440 EIF3DO15371 548 aaKnown RBP eCLIP12.09□□□□□ -0.47
TMC3-201ENST00000359440 CPP00450 1065 aa12.09□□□□□ -0.47
TMC3-201ENST00000359440 MDM2Q00987 491 aaPredicted RBP12.09□□□□□ -0.47
TMC3-201ENST00000359440 CDR2Q01850 454 aa12.09□□□□□ -0.47
TMC3-201ENST00000359440 TTLL12Q14166 644 aaPredicted RBP12.09□□□□□ -0.47
TMC3-201ENST00000359440 MCPH1Q8NEM0 835 aa12.09□□□□□ -0.47
TMC3-201ENST00000359440 VCPKMTQ9H867 229 aa12.09□□□□□ -0.47
TMC3-201ENST00000359440 APEX2Q9UBZ4 518 aa12.09□□□□□ -0.47
TMC3-201ENST00000359440 A0A0A6YYK5 440 aaPredicted RBP12.09□□□□□ -0.47
TMC3-201ENST00000359440 GIPC1O14908 333 aa12.09□□□□□ -0.47
TMC3-201ENST00000359440 HSD17B3P37058 310 aa12.09□□□□□ -0.47
TMC3-201ENST00000359440 CTTNQ14247 550 aaKnown RBP12.09□□□□□ -0.47
TMC3-201ENST00000359440 ANKRD20A4Q4UJ75 823 aa12.09□□□□□ -0.47
TMC3-201ENST00000359440 ANKRD20A8PQ5CZ79 823 aa12.09□□□□□ -0.47
TMC3-201ENST00000359440 ANKRD20A2Q5SQ80 823 aa12.09□□□□□ -0.47
TMC3-201ENST00000359440 ANKRD20A1Q5TYW2 823 aa12.09□□□□□ -0.47
TMC3-201ENST00000359440 KIAA0825Q8IV33 1275 aa12.09□□□□□ -0.47
TMC3-201ENST00000359440 WDR75Q8IWA0 830 aaKnown RBP12.09□□□□□ -0.47
TMC3-201ENST00000359440 ALKBH8Q96BT7 664 aaKnown RBP12.09□□□□□ -0.47
TMC3-201ENST00000359440 TMBIM4Q9HC24 238 aa12.09□□□□□ -0.47
TMC3-201ENST00000359440 CD209Q9NNX6 404 aa12.09□□□□□ -0.47
TMC3-201ENST00000359440 HAUS2Q9NVX0 235 aa12.09□□□□□ -0.47
TMC3-201ENST00000359440 GGA2Q9UJY4 613 aa12.09□□□□□ -0.47
TMC3-201ENST00000359440 TPX2Q9ULW0 747 aaKnown RBP12.09□□□□□ -0.47
TMC3-201ENST00000359440 POTEFA5A3E0 1075 aa12.09□□□□□ -0.47
TMC3-201ENST00000359440 LRRIQ4A6NIV6 560 aa12.09□□□□□ -0.47
TMC3-201ENST00000359440 RASSF10A6NK89 507 aa12.09□□□□□ -0.47
TMC3-201ENST00000359440 POTEIP0CG38 1075 aa12.09□□□□□ -0.47
TMC3-201ENST00000359440 PDE1BQ01064 536 aa12.09□□□□□ -0.47
TMC3-201ENST00000359440 FAM160B1Q5W0V3 765 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms