RNA–Protein interactions for RNA: ENST00000358966.6

GGPS1-202, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene GGPS1, Length 2,740 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-202ENST00000358966 ZC3H3Q8IXZ2 948 aaKnown RBP13.83□□□□□ -0.2
GGPS1-202ENST00000358966 GOLGA5Q8TBA6 731 aa13.83□□□□□ -0.2
GGPS1-202ENST00000358966 PDGFCQ9NRA1 345 aa13.83□□□□□ -0.2
GGPS1-202ENST00000358966 DBR1Q9UK59 544 aaKnown RBP13.83□□□□□ -0.2
GGPS1-202ENST00000358966 SYNGAP1Q96PV0 1343 aa13.82□□□□□ -0.2
GGPS1-202ENST00000358966 CCL15-CCL14A0A0B4J2E2 113 aa13.82□□□□□ -0.2
GGPS1-202ENST00000358966 GOLGA8IPA6NC78 632 aa13.82□□□□□ -0.2
GGPS1-202ENST00000358966 GOLGA8JA6NMD2 632 aa13.82□□□□□ -0.2
GGPS1-202ENST00000358966 BTBD19C9JJ37 291 aa13.82□□□□□ -0.2
GGPS1-202ENST00000358966 PDHXO00330 501 aa13.82□□□□□ -0.2
GGPS1-202ENST00000358966 PPP1R37O75864 691 aa13.82□□□□□ -0.2
GGPS1-202ENST00000358966 ETF1P62495 437 aaKnown RBP13.82□□□□□ -0.2
GGPS1-202ENST00000358966 CCL15Q16663 113 aa13.82□□□□□ -0.2
GGPS1-202ENST00000358966 DNERQ8NFT8 737 aa13.82□□□□□ -0.2
GGPS1-202ENST00000358966 BRI3BPQ8WY22 251 aa13.82□□□□□ -0.2
GGPS1-202ENST00000358966 ELMO3Q96BJ8 720 aa13.82□□□□□ -0.2
GGPS1-202ENST00000358966 ERO1AQ96HE7 468 aa13.82□□□□□ -0.2
GGPS1-202ENST00000358966 MS4A4AQ96JQ5 239 aa13.82□□□□□ -0.2
GGPS1-202ENST00000358966 GBP3Q9H0R5 595 aa13.82□□□□□ -0.2
GGPS1-202ENST00000358966 ZCCHC17Q9NP64 241 aaKnown RBP13.82□□□□□ -0.2
GGPS1-202ENST00000358966 XPNPEP1Q9NQW7 623 aa13.82□□□□□ -0.2
GGPS1-202ENST00000358966 AJAP1Q9UKB5 411 aaPredicted RBP13.82□□□□□ -0.2
GGPS1-202ENST00000358966 RCCD1A6NED2 376 aa13.82□□□□□ -0.2
GGPS1-202ENST00000358966 ZSCAN12O43309 604 aa13.82□□□□□ -0.2
GGPS1-202ENST00000358966 NDUFA10O95299 355 aa13.82□□□□□ -0.2
GGPS1-202ENST00000358966 GGPS1O95749 300 aa13.82□□□□□ -0.2
GGPS1-202ENST00000358966 MUTP22033 750 aa13.82□□□□□ -0.2
GGPS1-202ENST00000358966 FECHP22830 423 aa13.82□□□□□ -0.2
GGPS1-202ENST00000358966 XRRA1Q6P2D8 792 aa13.82□□□□□ -0.2
GGPS1-202ENST00000358966 HAUS6Q7Z4H7 955 aa13.82□□□□□ -0.2
GGPS1-202ENST00000358966 TMTC1Q8IUR5 882 aa13.82□□□□□ -0.2
GGPS1-202ENST00000358966 TMEM143Q96AN5 459 aa13.82□□□□□ -0.2
GGPS1-202ENST00000358966 MMP19Q99542 508 aa13.82□□□□□ -0.2
GGPS1-202ENST00000358966 LARSQ9P2J5 1176 aaKnown RBP13.82□□□□□ -0.2
GGPS1-202ENST00000358966 LOXHD1Q8IVV2 1947 aa13.81□□□□□ -0.2
GGPS1-202ENST00000358966 SOCS7O14512 581 aa13.81□□□□□ -0.2
GGPS1-202ENST00000358966 FARP2O94887 1054 aaPredicted RBP13.81□□□□□ -0.2
GGPS1-202ENST00000358966 LYPLA2O95372 231 aa13.81□□□□□ -0.2
GGPS1-202ENST00000358966 PSAPP07602 524 aa13.81□□□□□ -0.2
GGPS1-202ENST00000358966 XRCC5P13010 732 aaKnown RBP13.81□□□□□ -0.2
GGPS1-202ENST00000358966 PLS3P13797 630 aa13.81□□□□□ -0.2
GGPS1-202ENST00000358966 DLG4P78352 724 aa13.81□□□□□ -0.2
GGPS1-202ENST00000358966 ZBED6P86452 979 aa13.81□□□□□ -0.2
GGPS1-202ENST00000358966 HSDL1Q3SXM5 330 aa13.81□□□□□ -0.2
GGPS1-202ENST00000358966 PPP4R3CPQ6ZMV5 832 aa13.81□□□□□ -0.2
GGPS1-202ENST00000358966 DNAAF5Q86Y56 855 aa13.81□□□□□ -0.2
GGPS1-202ENST00000358966 BAP1Q92560 729 aa13.81□□□□□ -0.2
GGPS1-202ENST00000358966 SLC35C1Q96A29 364 aa13.81□□□□□ -0.2
GGPS1-202ENST00000358966 CCDC51Q96ER9 411 aa13.81□□□□□ -0.2
GGPS1-202ENST00000358966 BORCS6Q96GS4 357 aa13.81□□□□□ -0.2
GGPS1-202ENST00000358966 PCYT2Q99447 389 aa13.81□□□□□ -0.2
GGPS1-202ENST00000358966 NHEJ1Q9H9Q4 299 aaPredicted RBP13.81□□□□□ -0.2
GGPS1-202ENST00000358966 ARHGAP20Q9P2F6 1191 aa13.81□□□□□ -0.2
GGPS1-202ENST00000358966 FBXO40Q9UH90 709 aa13.81□□□□□ -0.2
GGPS1-202ENST00000358966 EPN1Q9Y6I3 576 aaPredicted RBP13.81□□□□□ -0.2
GGPS1-202ENST00000358966 DUSP10Q9Y6W6 482 aa13.81□□□□□ -0.2
GGPS1-202ENST00000358966 DOCK3Q8IZD9 2030 aa13.81□□□□□ -0.2
GGPS1-202ENST00000358966 ZNF263O14978 683 aa13.81□□□□□ -0.2
GGPS1-202ENST00000358966 EIF3DO15371 548 aaKnown RBP eCLIP13.81□□□□□ -0.2
GGPS1-202ENST00000358966 SUPT20HL2P0C7V6 817 aa13.81□□□□□ -0.2
GGPS1-202ENST00000358966 NPTX2P47972 431 aa13.81□□□□□ -0.2
GGPS1-202ENST00000358966 CLCN6P51797 869 aa13.81□□□□□ -0.2
GGPS1-202ENST00000358966 KCTD2Q14681 263 aa13.81□□□□□ -0.2
GGPS1-202ENST00000358966 FASTKD5Q7L8L6 764 aaKnown RBP13.81□□□□□ -0.2
GGPS1-202ENST00000358966 CACNA2D4Q7Z3S7 1137 aa13.81□□□□□ -0.2
GGPS1-202ENST00000358966 FAM186BQ8IYM0 893 aa13.81□□□□□ -0.2
GGPS1-202ENST00000358966 ZNF668Q96K58 619 aaPredicted RBP13.81□□□□□ -0.2
GGPS1-202ENST00000358966 IWS1Q96ST2 819 aa13.81□□□□□ -0.2
GGPS1-202ENST00000358966 NAA15Q9BXJ9 866 aaKnown RBP13.81□□□□□ -0.2
GGPS1-202ENST00000358966 KCND2Q9NZV8 630 aa13.81□□□□□ -0.2
GGPS1-202ENST00000358966 MAFGO15525 162 aa13.8□□□□□ -0.2
GGPS1-202ENST00000358966 EPB41P11171 864 aaKnown RBP13.8□□□□□ -0.2
GGPS1-202ENST00000358966 H2AFXP16104 143 aaPredicted RBP13.8□□□□□ -0.2
GGPS1-202ENST00000358966 OSBPP22059 807 aa13.8□□□□□ -0.2
GGPS1-202ENST00000358966 EDNRBP24530 442 aa13.8□□□□□ -0.2
GGPS1-202ENST00000358966 DRP2Q13474 957 aa13.8□□□□□ -0.2
GGPS1-202ENST00000358966 HS2ST1Q7LGA3 356 aa13.8□□□□□ -0.2
GGPS1-202ENST00000358966 ATP6V0A1Q93050 837 aa13.8□□□□□ -0.2
GGPS1-202ENST00000358966 STRA6Q9BX79 667 aa13.8□□□□□ -0.2
GGPS1-202ENST00000358966 GBA2Q9HCG7 927 aaPredicted RBP13.8□□□□□ -0.2
GGPS1-202ENST00000358966 CYP26B1Q9NR63 512 aa13.8□□□□□ -0.2
GGPS1-202ENST00000358966 ARID2Q68CP9 1835 aa13.8□□□□□ -0.2
GGPS1-202ENST00000358966 EXOC3O60645 756 aa13.8□□□□□ -0.2
GGPS1-202ENST00000358966 MARSP56192 900 aaKnown RBP13.8□□□□□ -0.2
GGPS1-202ENST00000358966 TSR1Q2NL82 804 aaKnown RBP13.8□□□□□ -0.2
GGPS1-202ENST00000358966 MAP9Q49MG5 647 aa13.8□□□□□ -0.2
GGPS1-202ENST00000358966 CBWD6Q4V339 395 aa13.8□□□□□ -0.2
GGPS1-202ENST00000358966 CBWD3Q5JTY5 395 aa13.8□□□□□ -0.2
GGPS1-202ENST00000358966 CBWD5Q5RIA9 395 aa13.8□□□□□ -0.2
GGPS1-202ENST00000358966 SAAL1Q96ER3 474 aa13.8□□□□□ -0.2
GGPS1-202ENST00000358966 PTPN18Q99952 460 aa13.8□□□□□ -0.2
GGPS1-202ENST00000358966 GSTTP1A0A1W2PQM5 241 aa13.79□□□□□ -0.2
GGPS1-202ENST00000358966 ANKRD63C9JTQ0 380 aa13.79□□□□□ -0.2
GGPS1-202ENST00000358966 TLR2O60603 784 aa13.79□□□□□ -0.2
GGPS1-202ENST00000358966 ARHGAP25P42331 645 aa13.79□□□□□ -0.2
GGPS1-202ENST00000358966 MEA1Q16626 185 aa13.79□□□□□ -0.2
GGPS1-202ENST00000358966 CDHR1Q96JP9 859 aa13.79□□□□□ -0.2
GGPS1-202ENST00000358966 LACRTQ9GZZ8 138 aa13.79□□□□□ -0.2
GGPS1-202ENST00000358966 ZNF302Q9NR11 478 aa13.79□□□□□ -0.2
GGPS1-202ENST00000358966 SEL1LQ9UBV2 794 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms