RNA–Protein interactions for RNA: ENST00000357409.9

VPS13A-202, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13A, Length 9,967 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-202ENST00000357409 SH3BGRLO75368 114 aa7.87□□□□□ -1.15
VPS13A-202ENST00000357409 CCDC38Q502W7 563 aa7.87□□□□□ -1.15
VPS13A-202ENST00000357409 ZNF614Q8N883 585 aa7.87□□□□□ -1.15
VPS13A-202ENST00000357409 RSPH1Q8WYR4 309 aa7.87□□□□□ -1.15
VPS13A-202ENST00000357409 SP110Q9HB58 689 aa7.87□□□□□ -1.15
VPS13A-202ENST00000357409 ARHGAP6O43182 974 aa7.87□□□□□ -1.15
VPS13A-202ENST00000357409 MOB2Q70IA6 237 aa7.87□□□□□ -1.15
VPS13A-202ENST00000357409 PDZD4Q76G19 769 aaPredicted RBP7.87□□□□□ -1.15
VPS13A-202ENST00000357409 NSUN7Q8NE18 718 aaKnown RBP7.87□□□□□ -1.15
VPS13A-202ENST00000357409 MYOCQ99972 504 aa7.87□□□□□ -1.15
VPS13A-202ENST00000357409 LSG1Q9H089 658 aaKnown RBP7.87□□□□□ -1.15
VPS13A-202ENST00000357409 MUC3BQ9H195 1237 aa7.87□□□□□ -1.15
VPS13A-202ENST00000357409 FAM95CA0A1B0GW59 222 aa7.86□□□□□ -1.15
VPS13A-202ENST00000357409 KBTBD13C9JR72 458 aa7.86□□□□□ -1.15
VPS13A-202ENST00000357409 SCAMP1O15126 338 aa7.86□□□□□ -1.15
VPS13A-202ENST00000357409 GMFGO60234 142 aa7.86□□□□□ -1.15
VPS13A-202ENST00000357409 RPS6KA5O75582 802 aa7.86□□□□□ -1.15
VPS13A-202ENST00000357409 TSPY1Q01534 308 aa7.86□□□□□ -1.15
VPS13A-202ENST00000357409 GPATCH4Q5T3I0 446 aaKnown RBP7.86□□□□□ -1.15
VPS13A-202ENST00000357409 TAGAPQ8N103 731 aa7.86□□□□□ -1.15
VPS13A-202ENST00000357409 IWS1Q96ST2 819 aa7.86□□□□□ -1.15
VPS13A-202ENST00000357409 DYNC1LI1Q9Y6G9 523 aaKnown RBP7.86□□□□□ -1.15
VPS13A-202ENST00000357409 TCN1P20061 433 aaPredicted RBP7.86□□□□□ -1.15
VPS13A-202ENST00000357409 STX1BP61266 288 aa7.86□□□□□ -1.15
VPS13A-202ENST00000357409 NAA30Q147X3 362 aaPredicted RBP7.86□□□□□ -1.15
VPS13A-202ENST00000357409 DHX30Q7L2E3 1194 aaKnown RBP eCLIP7.86□□□□□ -1.15
VPS13A-202ENST00000357409 PPM1NQ8N819 430 aa7.86□□□□□ -1.15
VPS13A-202ENST00000357409 ULK4Q96C45 1275 aa7.86□□□□□ -1.15
VPS13A-202ENST00000357409 LZTS2Q9BRK4 669 aa7.86□□□□□ -1.15
VPS13A-202ENST00000357409 MT-ND3P03897 115 aa7.86□□□□□ -1.15
VPS13A-202ENST00000357409 PPP1R2P41236 205 aa7.86□□□□□ -1.15
VPS13A-202ENST00000357409 LRRC36Q1X8D7 754 aa7.86□□□□□ -1.15
VPS13A-202ENST00000357409 ZMYM1Q5SVZ6 1142 aa7.86□□□□□ -1.15
VPS13A-202ENST00000357409 FAXCQ5TGI0 409 aa7.86□□□□□ -1.15
VPS13A-202ENST00000357409 BTBD8Q5XKL5 378 aa7.86□□□□□ -1.15
VPS13A-202ENST00000357409 FBXL13Q8NEE6 735 aa7.86□□□□□ -1.15
VPS13A-202ENST00000357409 SLC26A7Q8TE54 656 aa7.86□□□□□ -1.15
VPS13A-202ENST00000357409 BCL2L12Q9HB09 334 aa7.86□□□□□ -1.15
VPS13A-202ENST00000357409 KIF11P52732 1056 aa7.86□□□□□ -1.15
VPS13A-202ENST00000357409 RSBN1LQ6PCB5 846 aaPredicted RBP7.86□□□□□ -1.15
VPS13A-202ENST00000357409 ZSWIM2Q8NEG5 633 aa7.86□□□□□ -1.15
VPS13A-202ENST00000357409 PAGE5Q96GU1 130 aa7.86□□□□□ -1.15
VPS13A-202ENST00000357409 INTS4Q96HW7 963 aaKnown RBP7.86□□□□□ -1.15
VPS13A-202ENST00000357409 SOX10P56693 466 aa7.86□□□□□ -1.15
VPS13A-202ENST00000357409 RASIP1Q5U651 963 aa7.86□□□□□ -1.15
VPS13A-202ENST00000357409 EFCAB12Q6NXP0 572 aa7.86□□□□□ -1.15
VPS13A-202ENST00000357409 PABPC5Q96DU9 382 aaKnown RBP7.86□□□□□ -1.15
VPS13A-202ENST00000357409 PNMA5Q96PV4 448 aa7.86□□□□□ -1.15
VPS13A-202ENST00000357409 PDE11AQ9HCR9 933 aa7.86□□□□□ -1.15
VPS13A-202ENST00000357409 ADAM22Q9P0K1 906 aa7.86□□□□□ -1.15
VPS13A-202ENST00000357409 SLC13A4Q9UKG4 626 aa7.86□□□□□ -1.15
VPS13A-202ENST00000357409 SUPT3HB4E1H0 165 aa7.86□□□□□ -1.15
VPS13A-202ENST00000357409 POMCP01189 267 aa7.86□□□□□ -1.15
VPS13A-202ENST00000357409 GNA15P30679 374 aa7.86□□□□□ -1.15
VPS13A-202ENST00000357409 TAAR1Q96RJ0 339 aa7.86□□□□□ -1.15
VPS13A-202ENST00000357409 CYP26A1O43174 497 aa7.86□□□□□ -1.15
VPS13A-202ENST00000357409 GNAT1P11488 350 aa7.86□□□□□ -1.15
VPS13A-202ENST00000357409 LAYNQ6UX15 382 aa7.86□□□□□ -1.15
VPS13A-202ENST00000357409 LDHDQ86WU2 507 aa7.86□□□□□ -1.15
VPS13A-202ENST00000357409 BTBD6Q96KE9 485 aa7.86□□□□□ -1.15
VPS13A-202ENST00000357409 RAB3IPQ96QF0 476 aaPredicted RBP7.86□□□□□ -1.15
VPS13A-202ENST00000357409 ABI2Q9NYB9 513 aaPredicted RBP7.86□□□□□ -1.15
VPS13A-202ENST00000357409 PCDHA13Q9Y5I0 950 aa7.86□□□□□ -1.15
VPS13A-202ENST00000357409 UBE4BO95155 1302 aa7.86□□□□□ -1.15
VPS13A-202ENST00000357409 GPATCH8Q9UKJ3 1502 aaKnown RBP7.86□□□□□ -1.15
VPS13A-202ENST00000357409 FAM205CA6NFA0 338 aa7.86□□□□□ -1.15
VPS13A-202ENST00000357409 GGPS1O95749 300 aa7.86□□□□□ -1.15
VPS13A-202ENST00000357409 TTC4O95801 387 aa7.86□□□□□ -1.15
VPS13A-202ENST00000357409 ERO1AQ96HE7 468 aa7.86□□□□□ -1.15
VPS13A-202ENST00000357409 PIF1Q9H611 641 aa7.86□□□□□ -1.15
VPS13A-202ENST00000357409 PIH1D1Q9NWS0 290 aaKnown RBP7.86□□□□□ -1.15
VPS13A-202ENST00000357409 C6orf203Q9P0P8 240 aaPredicted RBP7.86□□□□□ -1.15
VPS13A-202ENST00000357409 SYCP2Q9BX26 1530 aa7.86□□□□□ -1.15
VPS13A-202ENST00000357409 A0A0G2JND7 137 aa7.85□□□□□ -1.15
VPS13A-202ENST00000357409 MOXD2PA6NHM9 499 aa7.85□□□□□ -1.15
VPS13A-202ENST00000357409 LONP1P36776 959 aaKnown RBP7.85□□□□□ -1.15
VPS13A-202ENST00000357409 C9orf131Q5VYM1 1079 aa7.85□□□□□ -1.15
VPS13A-202ENST00000357409 DDIASQ8IXT1 998 aa7.85□□□□□ -1.15
VPS13A-202ENST00000357409 AKT1S1Q96B36 256 aa7.85□□□□□ -1.15
VPS13A-202ENST00000357409 KLHL14Q9P2G3 628 aa7.85□□□□□ -1.15
VPS13A-202ENST00000357409 GRIN2AQ12879 1464 aa7.85□□□□□ -1.15
VPS13A-202ENST00000357409 TTLL13PA6NNM8 815 aa7.85□□□□□ -1.15
VPS13A-202ENST00000357409 PFKFB2O60825 505 aa7.85□□□□□ -1.15
VPS13A-202ENST00000357409 PPFIA4O75335 1185 aa7.85□□□□□ -1.15
VPS13A-202ENST00000357409 MMP1P03956 469 aa7.85□□□□□ -1.15
VPS13A-202ENST00000357409 PRCPP42785 496 aa7.85□□□□□ -1.15
VPS13A-202ENST00000357409 TTLL4Q14679 1199 aa7.85□□□□□ -1.15
VPS13A-202ENST00000357409 UBE3CQ15386 1083 aa7.85□□□□□ -1.15
VPS13A-202ENST00000357409 SMTNL2Q2TAL5 461 aa7.85□□□□□ -1.15
VPS13A-202ENST00000357409 PADI6Q6TGC4 694 aa7.85□□□□□ -1.15
VPS13A-202ENST00000357409 RUFY4Q6ZNE9 571 aa7.85□□□□□ -1.15
VPS13A-202ENST00000357409 SSH3Q8TE77 659 aa7.85□□□□□ -1.15
VPS13A-202ENST00000357409 GIPC2Q8TF65 315 aa7.85□□□□□ -1.15
VPS13A-202ENST00000357409 KCNQ5Q9NR82 932 aa7.85□□□□□ -1.15
VPS13A-202ENST00000357409 CAPN11Q9UMQ6 739 aa7.85□□□□□ -1.15
VPS13A-202ENST00000357409 PTPN23Q9H3S7 1636 aa7.85□□□□□ -1.15
VPS13A-202ENST00000357409 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP7.85□□□□□ -1.15
VPS13A-202ENST00000357409 PFDN6O15212 129 aa7.85□□□□□ -1.15
VPS13A-202ENST00000357409 SERPINI2O75830 405 aa7.85□□□□□ -1.15
VPS13A-202ENST00000357409 KRT31Q15323 416 aa7.85□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms