RNA–Protein interactions for RNA: ENST00000357388.7

SMC4-202, Transcript of structural maintenance of chromosomes 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC4, Length 5,471 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-202ENST00000357388 ABHD10Q9NUJ1 306 aa13.67□□□□□ -0.22
SMC4-202ENST00000357388 CAB39Q9Y376 341 aaPredicted RBP13.67□□□□□ -0.22
SMC4-202ENST00000357388 PSAPP07602 524 aa13.67□□□□□ -0.22
SMC4-202ENST00000357388 GNAT1P11488 350 aa13.67□□□□□ -0.22
SMC4-202ENST00000357388 STAT4Q14765 748 aa13.67□□□□□ -0.22
SMC4-202ENST00000357388 TMEM154Q6P9G4 183 aa13.67□□□□□ -0.22
SMC4-202ENST00000357388 PROM2Q8N271 834 aa13.67□□□□□ -0.22
SMC4-202ENST00000357388 ELMOD1Q8N336 334 aa13.67□□□□□ -0.22
SMC4-202ENST00000357388 KCNK16Q96T55 309 aa13.67□□□□□ -0.22
SMC4-202ENST00000357388 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.67□□□□□ -0.222e-9■■■■■ 75.2
SMC4-202ENST00000357388 MAGEB5Q9BZ81 275 aa13.67□□□□□ -0.22
SMC4-202ENST00000357388 EMILIN3Q9NT22 766 aa13.67□□□□□ -0.22
SMC4-202ENST00000357388 MDH1P40925 334 aaKnown RBP13.67□□□□□ -0.22
SMC4-202ENST00000357388 ATP11CQ8NB49 1132 aa13.67□□□□□ -0.22
SMC4-202ENST00000357388 TTC8Q8TAM2 541 aa13.67□□□□□ -0.22
SMC4-202ENST00000357388 THOC1Q96FV9 657 aaKnown RBP13.67□□□□□ -0.22
SMC4-202ENST00000357388 BMP3P12645 472 aa13.67□□□□□ -0.22
SMC4-202ENST00000357388 BYSLQ13895 437 aaKnown RBP13.67□□□□□ -0.22
SMC4-202ENST00000357388 RC3H1Q5TC82 1133 aaKnown RBP13.67□□□□□ -0.22
SMC4-202ENST00000357388 RNF219Q5W0B1 726 aaPredicted RBP13.67□□□□□ -0.22
SMC4-202ENST00000357388 FRA10AC1Q70Z53 315 aa13.67□□□□□ -0.22
SMC4-202ENST00000357388 TERB1Q8NA31 727 aa13.67□□□□□ -0.22
SMC4-202ENST00000357388 RNF217Q8TC41 542 aa13.67□□□□□ -0.22
SMC4-202ENST00000357388 GPKOWQ92917 476 aaPredicted RBP eCLIP13.67□□□□□ -0.222e-13■□□□□ 9.3
SMC4-202ENST00000357388 SLC10A4Q96EP9 437 aa13.67□□□□□ -0.22
SMC4-202ENST00000357388 PAGE5Q96GU1 130 aa13.67□□□□□ -0.22
SMC4-202ENST00000357388 ANKRD65E5RJM6 399 aa13.66□□□□□ -0.22
SMC4-202ENST00000357388 LRRN2O75325 713 aa13.66□□□□□ -0.22
SMC4-202ENST00000357388 RUNX1T1Q06455 604 aa13.66□□□□□ -0.22
SMC4-202ENST00000357388 TRAF7Q6Q0C0 670 aa13.66□□□□□ -0.22
SMC4-202ENST00000357388 SYDE1Q6ZW31 735 aaPredicted RBP13.66□□□□□ -0.22
SMC4-202ENST00000357388 DNAJC9Q8WXX5 260 aa13.66□□□□□ -0.22
SMC4-202ENST00000357388 EML4Q9HC35 981 aaKnown RBP13.66□□□□□ -0.22
SMC4-202ENST00000357388 CLRN2A0PK11 232 aa13.66□□□□□ -0.22
SMC4-202ENST00000357388 STK25O00506 426 aa13.66□□□□□ -0.22
SMC4-202ENST00000357388 RASSF9O75901 435 aa13.66□□□□□ -0.22
SMC4-202ENST00000357388 ZRANB2O95218 330 aaKnown RBP eCLIP13.66□□□□□ -0.22
SMC4-202ENST00000357388 IL6STP40189 918 aaPredicted RBP13.66□□□□□ -0.22
SMC4-202ENST00000357388 Q3C1V9 767 aa13.66□□□□□ -0.22
SMC4-202ENST00000357388 RABGAP1LQ5R372 815 aa13.66□□□□□ -0.22
SMC4-202ENST00000357388 ANGPTL8Q6UXH0 198 aa13.66□□□□□ -0.22
SMC4-202ENST00000357388 FASTKD5Q7L8L6 764 aaKnown RBP13.66□□□□□ -0.22
SMC4-202ENST00000357388 SNF8Q96H20 258 aa13.66□□□□□ -0.22
SMC4-202ENST00000357388 LGALS16A8MUM7 142 aa13.66□□□□□ -0.22
SMC4-202ENST00000357388 ACADSP16219 412 aa13.66□□□□□ -0.22
SMC4-202ENST00000357388 SERPINB3P29508 390 aa13.66□□□□□ -0.22
SMC4-202ENST00000357388 CRYMQ14894 314 aa13.66□□□□□ -0.22
SMC4-202ENST00000357388 TBC1D9BQ66K14 1250 aa13.66□□□□□ -0.22
SMC4-202ENST00000357388 PIK3R2O00459 728 aa13.66□□□□□ -0.22
SMC4-202ENST00000357388 FGAP02671 866 aa13.66□□□□□ -0.22
SMC4-202ENST00000357388 RESTQ13127 1097 aa13.66□□□□□ -0.22
SMC4-202ENST00000357388 OR6B2Q6IFH4 312 aa13.66□□□□□ -0.22
SMC4-202ENST00000357388 CDR2LQ86X02 465 aaPredicted RBP13.66□□□□□ -0.22
SMC4-202ENST00000357388 CATSPER3Q86XQ3 398 aa13.66□□□□□ -0.22
SMC4-202ENST00000357388 RTKN2Q8IZC4 609 aa13.66□□□□□ -0.22
SMC4-202ENST00000357388 ZNF473Q8WTR7 871 aaKnown RBP13.66□□□□□ -0.22
SMC4-202ENST00000357388 DDI1Q8WTU0 396 aa13.66□□□□□ -0.22
SMC4-202ENST00000357388 EPAS1Q99814 870 aa13.66□□□□□ -0.22
SMC4-202ENST00000357388 CARD14Q9BXL6 1004 aa13.66□□□□□ -0.22
SMC4-202ENST00000357388 EIF3HO15372 352 aaKnown RBP eCLIP13.65□□□□□ -0.228e-6■□□□□ 10.6
SMC4-202ENST00000357388 DIAPH2O60879 1101 aa13.65□□□□□ -0.22
SMC4-202ENST00000357388 KRT14P02533 472 aa13.65□□□□□ -0.22
SMC4-202ENST00000357388 CCDC85BQ15834 202 aaPredicted RBP13.65□□□□□ -0.22
SMC4-202ENST00000357388 C16orf89Q6UX73 402 aa13.65□□□□□ -0.22
SMC4-202ENST00000357388 DSTYKQ6XUX3 929 aa13.65□□□□□ -0.22
SMC4-202ENST00000357388 CFAP69A5D8W1 941 aa13.65□□□□□ -0.22
SMC4-202ENST00000357388 TBC1D4O60343 1298 aa13.65□□□□□ -0.22
SMC4-202ENST00000357388 PDE8BO95263 885 aa13.65□□□□□ -0.22
SMC4-202ENST00000357388 HSPA1AP0DMV8 641 aaKnown RBP13.65□□□□□ -0.22
SMC4-202ENST00000357388 HSPA1BP0DMV9 641 aaKnown RBP13.65□□□□□ -0.22
SMC4-202ENST00000357388 KCNJ6P48051 423 aa13.65□□□□□ -0.22
SMC4-202ENST00000357388 GPC5P78333 572 aa13.65□□□□□ -0.22
SMC4-202ENST00000357388 TFAMQ00059 246 aaKnown RBP13.65□□□□□ -0.22
SMC4-202ENST00000357388 TOGARAM2Q6ZUX3 1019 aa13.65□□□□□ -0.22
SMC4-202ENST00000357388 TRIM69Q86WT6 500 aa13.65□□□□□ -0.22
SMC4-202ENST00000357388 ANTXR1Q9H6X2 564 aa13.65□□□□□ -0.22
SMC4-202ENST00000357388 NDUFB9Q9Y6M9 179 aa13.65□□□□□ -0.22
SMC4-202ENST00000357388 ATP10AO60312 1499 aa13.65□□□□□ -0.22
SMC4-202ENST00000357388 GOLGA8TH3BQL2 631 aa13.65□□□□□ -0.22
SMC4-202ENST00000357388 MEIS1O00470 390 aa13.65□□□□□ -0.22
SMC4-202ENST00000357388 CIAO1O76071 339 aa13.65□□□□□ -0.22
SMC4-202ENST00000357388 GSNP06396 782 aa13.65□□□□□ -0.22
SMC4-202ENST00000357388 CYP27A1Q02318 531 aa13.65□□□□□ -0.22
SMC4-202ENST00000357388 IMPG1Q17R60 797 aa13.65□□□□□ -0.22
SMC4-202ENST00000357388 DALRD3Q5D0E6 543 aaKnown RBP13.65□□□□□ -0.22
SMC4-202ENST00000357388 LRRC8EQ6NSJ5 796 aa13.65□□□□□ -0.22
SMC4-202ENST00000357388 BTNL9Q6UXG8 535 aa13.65□□□□□ -0.22
SMC4-202ENST00000357388 SUPT3HO75486 399 aa13.65□□□□□ -0.22
SMC4-202ENST00000357388 PLEKHM3Q6ZWE6 761 aa13.65□□□□□ -0.22
SMC4-202ENST00000357388 THEM5Q8N1Q8 247 aa13.65□□□□□ -0.22
SMC4-202ENST00000357388 CDC26Q8NHZ8 85 aa13.65□□□□□ -0.22
SMC4-202ENST00000357388 PI4K2BQ8TCG2 481 aa13.65□□□□□ -0.22
SMC4-202ENST00000357388 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.65□□□□□ -0.227e-7■■■■□ 21.2
SMC4-202ENST00000357388 ZKSCAN7Q9P0L1 754 aaPredicted RBP13.65□□□□□ -0.22
SMC4-202ENST00000357388 PITPNM2Q9BZ72 1349 aa13.64□□□□□ -0.23
SMC4-202ENST00000357388 MYBL1P10243 752 aa13.64□□□□□ -0.23
SMC4-202ENST00000357388 CEP78Q5JTW2 689 aa13.64□□□□□ -0.23
SMC4-202ENST00000357388 ACBD5Q5T8D3 534 aaPredicted RBP13.64□□□□□ -0.23
SMC4-202ENST00000357388 AGBL2Q5U5Z8 902 aa13.64□□□□□ -0.23
SMC4-202ENST00000357388 ZBTB33Q86T24 672 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms